Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21342:21346
Extra
PDB:
ATOM 1 O3' C A1341 -100.287-107.922 58.732 1.00126.33 O
ATOM 2 P A A1342 -101.273-109.097 59.219 1.00132.68 P
ATOM 3 OP1 A A1342 -100.521-110.368 59.133 1.00132.99 O
ATOM 4 OP2 A A1342 -102.533-108.961 58.446 1.00133.00 O
ATOM 5 O5' A A1342 -101.516-108.708 60.745 1.00133.09 O
ATOM 6 C5' A A1342 -102.469-109.389 61.537 1.00134.24 C
ATOM 7 C4' A A1342 -103.320-108.422 62.317 1.00134.40 C
ATOM 8 O4' A A1342 -103.551-107.238 61.515 1.00133.58 O
ATOM 9 C3' A A1342 -104.714-108.920 62.684 1.00135.56 C
ATOM 10 O3' A A1342 -104.742-109.684 63.885 1.00136.45 O
ATOM 11 C2' A A1342 -105.557-107.646 62.748 1.00135.32 C
ATOM 12 O2' A A1342 -105.485-107.042 64.035 1.00135.40 O
ATOM 13 C1' A A1342 -104.860-106.746 61.721 1.00134.09 C
ATOM 14 N9 A A1342 -105.566-106.715 60.414 1.00134.02 N
ATOM 15 C8 A A1342 -105.108-107.191 59.207 1.00133.64 C
ATOM 16 N7 A A1342 -105.941-107.003 58.209 1.00133.69 N
ATOM 17 C5 A A1342 -107.023-106.346 58.780 1.00134.12 C
ATOM 18 C6 A A1342 -108.244-105.869 58.239 1.00134.41 C
ATOM 19 N6 A A1342 -108.596-105.983 56.951 1.00134.29 N
ATOM 20 N1 A A1342 -109.102-105.250 59.093 1.00134.85 N
ATOM 21 C2 A A1342 -108.759-105.129 60.393 1.00134.99 C
ATOM 22 N3 A A1342 -107.651-105.544 61.017 1.00134.77 N
ATOM 23 C4 A A1342 -106.805-106.151 60.144 1.00134.33 C
ATOM 24 P U A1343 -104.698-111.296 63.830 1.00174.48 P
ATOM 25 OP1 U A1343 -105.213-111.786 65.138 1.00175.55 O
ATOM 26 OP2 U A1343 -103.323-111.687 63.414 1.00173.83 O
ATOM 27 O5' U A1343 -105.736-111.642 62.664 1.00174.81 O
TER
ATOM 1 O3' U B1345 -114.516-100.632 62.797 1.00274.34 O
ATOM 2 P G B1346 -114.028 -99.161 62.277 1.00132.90 P
ATOM 3 OP1 G B1346 -114.832 -98.152 63.028 1.00133.18 O
ATOM 4 OP2 G B1346 -114.101 -99.162 60.788 1.00132.50 O
ATOM 5 O5' G B1346 -112.502 -99.087 62.737 1.00132.02 O
ATOM 6 C5' G B1346 -112.144 -98.431 63.941 1.00131.85 C
ATOM 7 C4' G B1346 -110.982 -99.106 64.624 1.00131.68 C
ATOM 8 O4' G B1346 -110.920-100.510 64.260 1.00132.23 O
ATOM 9 C3' G B1346 -109.625 -98.574 64.250 1.00130.45 C
ATOM 10 O3' G B1346 -109.306 -97.395 64.947 1.00129.90 O
ATOM 11 C2' G B1346 -108.709 -99.750 64.545 1.00130.59 C
ATOM 12 O2' G B1346 -108.505 -99.884 65.944 1.00131.01 O
ATOM 13 C1' G B1346 -109.583-100.905 64.068 1.00131.55 C
ATOM 14 N9 G B1346 -109.409-101.165 62.632 1.00131.10 N
ATOM 15 C8 G B1346 -110.423-101.045 61.723 1.00131.37 C
ATOM 16 N7 G B1346 -110.070-101.303 60.502 1.00130.91 N
ATOM 17 C5 G B1346 -108.726-101.608 60.617 1.00130.28 C
ATOM 18 C6 G B1346 -107.806-101.963 59.602 1.00129.61 C
ATOM 19 O6 G B1346 -108.048-102.081 58.388 1.00129.46 O
ATOM 20 N1 G B1346 -106.524-102.189 60.120 1.00129.14 N
ATOM 21 C2 G B1346 -106.189-102.084 61.454 1.00129.31 C
ATOM 22 N2 G B1346 -104.911-102.348 61.766 1.00128.83 N
ATOM 23 N3 G B1346 -107.048-101.751 62.413 1.00129.94 N
ATOM 24 C4 G B1346 -108.292-101.530 61.926 1.00130.39 C
ATOM 25 P C B1347 -109.004 -96.064 64.121 1.00115.36 P
ATOM 26 OP1 C B1347 -109.264 -94.920 65.033 1.00115.25 O
ATOM 27 OP2 C B1347 -109.764 -96.155 62.840 1.00115.47 O
ATOM 28 O5' C B1347 -107.445 -96.212 63.838 1.00114.40 O
TER
ATOM 2 P A A1342 -101.273-109.097 59.219 1.00132.68 P
ATOM 3 OP1 A A1342 -100.521-110.368 59.133 1.00132.99 O
ATOM 4 OP2 A A1342 -102.533-108.961 58.446 1.00133.00 O
ATOM 5 O5' A A1342 -101.516-108.708 60.745 1.00133.09 O
ATOM 6 C5' A A1342 -102.469-109.389 61.537 1.00134.24 C
ATOM 7 C4' A A1342 -103.320-108.422 62.317 1.00134.40 C
ATOM 8 O4' A A1342 -103.551-107.238 61.515 1.00133.58 O
ATOM 9 C3' A A1342 -104.714-108.920 62.684 1.00135.56 C
ATOM 10 O3' A A1342 -104.742-109.684 63.885 1.00136.45 O
ATOM 11 C2' A A1342 -105.557-107.646 62.748 1.00135.32 C
ATOM 12 O2' A A1342 -105.485-107.042 64.035 1.00135.40 O
ATOM 13 C1' A A1342 -104.860-106.746 61.721 1.00134.09 C
ATOM 14 N9 A A1342 -105.566-106.715 60.414 1.00134.02 N
ATOM 15 C8 A A1342 -105.108-107.191 59.207 1.00133.64 C
ATOM 16 N7 A A1342 -105.941-107.003 58.209 1.00133.69 N
ATOM 17 C5 A A1342 -107.023-106.346 58.780 1.00134.12 C
ATOM 18 C6 A A1342 -108.244-105.869 58.239 1.00134.41 C
ATOM 19 N6 A A1342 -108.596-105.983 56.951 1.00134.29 N
ATOM 20 N1 A A1342 -109.102-105.250 59.093 1.00134.85 N
ATOM 21 C2 A A1342 -108.759-105.129 60.393 1.00134.99 C
ATOM 22 N3 A A1342 -107.651-105.544 61.017 1.00134.77 N
ATOM 23 C4 A A1342 -106.805-106.151 60.144 1.00134.33 C
ATOM 24 P U A1343 -104.698-111.296 63.830 1.00174.48 P
ATOM 25 OP1 U A1343 -105.213-111.786 65.138 1.00175.55 O
ATOM 26 OP2 U A1343 -103.323-111.687 63.414 1.00173.83 O
ATOM 27 O5' U A1343 -105.736-111.642 62.664 1.00174.81 O
TER
ATOM 1 O3' U B1345 -114.516-100.632 62.797 1.00274.34 O
ATOM 2 P G B1346 -114.028 -99.161 62.277 1.00132.90 P
ATOM 3 OP1 G B1346 -114.832 -98.152 63.028 1.00133.18 O
ATOM 4 OP2 G B1346 -114.101 -99.162 60.788 1.00132.50 O
ATOM 5 O5' G B1346 -112.502 -99.087 62.737 1.00132.02 O
ATOM 6 C5' G B1346 -112.144 -98.431 63.941 1.00131.85 C
ATOM 7 C4' G B1346 -110.982 -99.106 64.624 1.00131.68 C
ATOM 8 O4' G B1346 -110.920-100.510 64.260 1.00132.23 O
ATOM 9 C3' G B1346 -109.625 -98.574 64.250 1.00130.45 C
ATOM 10 O3' G B1346 -109.306 -97.395 64.947 1.00129.90 O
ATOM 11 C2' G B1346 -108.709 -99.750 64.545 1.00130.59 C
ATOM 12 O2' G B1346 -108.505 -99.884 65.944 1.00131.01 O
ATOM 13 C1' G B1346 -109.583-100.905 64.068 1.00131.55 C
ATOM 14 N9 G B1346 -109.409-101.165 62.632 1.00131.10 N
ATOM 15 C8 G B1346 -110.423-101.045 61.723 1.00131.37 C
ATOM 16 N7 G B1346 -110.070-101.303 60.502 1.00130.91 N
ATOM 17 C5 G B1346 -108.726-101.608 60.617 1.00130.28 C
ATOM 18 C6 G B1346 -107.806-101.963 59.602 1.00129.61 C
ATOM 19 O6 G B1346 -108.048-102.081 58.388 1.00129.46 O
ATOM 20 N1 G B1346 -106.524-102.189 60.120 1.00129.14 N
ATOM 21 C2 G B1346 -106.189-102.084 61.454 1.00129.31 C
ATOM 22 N2 G B1346 -104.911-102.348 61.766 1.00128.83 N
ATOM 23 N3 G B1346 -107.048-101.751 62.413 1.00129.94 N
ATOM 24 C4 G B1346 -108.292-101.530 61.926 1.00130.39 C
ATOM 25 P C B1347 -109.004 -96.064 64.121 1.00115.36 P
ATOM 26 OP1 C B1347 -109.264 -94.920 65.033 1.00115.25 O
ATOM 27 OP2 C B1347 -109.764 -96.155 62.840 1.00115.47 O
ATOM 28 O5' C B1347 -107.445 -96.212 63.838 1.00114.40 O
TER
Atoms:
OP1: (-100.521,-110.368,59.133)
OP2: (-102.533,-108.961,58.446)
C3': (-104.714,-108.920,62.684)
C1': (-104.860,-106.746,61.721)
C5': (-102.469,-109.389,61.537)
O4': (-103.551,-107.238,61.515)
C8: (-105.108,-107.191,59.207)
O2': (-105.485,-107.042,64.035)
C6: (-108.244,-105.869,58.239)
C5: (-107.023,-106.346,58.780)
C4: (-106.805,-106.151,60.144)
P: (-101.273,-109.097,59.219)
C4': (-103.320,-108.422,62.317)
C2': (-105.557,-107.646,62.748)
C2: (-108.759,-105.129,60.393)
N1: (-109.102,-105.250,59.093)
N3: (-107.651,-105.544,61.017)
N6: (-108.596,-105.983,56.951)
N7: (-105.941,-107.003,58.209)
N9: (-105.566,-106.715,60.414)
O5': (-101.516,-108.708,60.745)
O3': (-104.742,-109.684,63.885)
OP2: (-102.533,-108.961,58.446)
C3': (-104.714,-108.920,62.684)
C1': (-104.860,-106.746,61.721)
C5': (-102.469,-109.389,61.537)
O4': (-103.551,-107.238,61.515)
C8: (-105.108,-107.191,59.207)
O2': (-105.485,-107.042,64.035)
C6: (-108.244,-105.869,58.239)
C5: (-107.023,-106.346,58.780)
C4: (-106.805,-106.151,60.144)
P: (-101.273,-109.097,59.219)
C4': (-103.320,-108.422,62.317)
C2': (-105.557,-107.646,62.748)
C2: (-108.759,-105.129,60.393)
N1: (-109.102,-105.250,59.093)
N3: (-107.651,-105.544,61.017)
N6: (-108.596,-105.983,56.951)
N7: (-105.941,-107.003,58.209)
N9: (-105.566,-106.715,60.414)
O5': (-101.516,-108.708,60.745)
O3': (-104.742,-109.684,63.885)
OP1: (-114.832,-98.152,63.028)
OP2: (-114.101,-99.162,60.788)
C3': (-109.625,-98.574,64.250)
C1': (-109.583,-100.905,64.068)
C5': (-112.144,-98.431,63.941)
O6: (-108.048,-102.081,58.388)
O4': (-110.920,-100.510,64.260)
C8: (-110.423,-101.045,61.723)
C2: (-106.189,-102.084,61.454)
C6: (-107.806,-101.963,59.602)
C5: (-108.726,-101.608,60.617)
C4: (-108.292,-101.530,61.926)
P: (-114.028,-99.161,62.277)
C4': (-110.982,-99.106,64.624)
C2': (-108.709,-99.750,64.545)
O2': (-108.505,-99.884,65.944)
N1: (-106.524,-102.189,60.120)
N2: (-104.911,-102.348,61.766)
N3: (-107.048,-101.751,62.413)
N7: (-110.070,-101.303,60.502)
N9: (-109.409,-101.165,62.632)
O5': (-112.502,-99.087,62.737)
O3': (-109.306,-97.395,64.947)
OP2: (-114.101,-99.162,60.788)
C3': (-109.625,-98.574,64.250)
C1': (-109.583,-100.905,64.068)
C5': (-112.144,-98.431,63.941)
O6: (-108.048,-102.081,58.388)
O4': (-110.920,-100.510,64.260)
C8: (-110.423,-101.045,61.723)
C2: (-106.189,-102.084,61.454)
C6: (-107.806,-101.963,59.602)
C5: (-108.726,-101.608,60.617)
C4: (-108.292,-101.530,61.926)
P: (-114.028,-99.161,62.277)
C4': (-110.982,-99.106,64.624)
C2': (-108.709,-99.750,64.545)
O2': (-108.505,-99.884,65.944)
N1: (-106.524,-102.189,60.120)
N2: (-104.911,-102.348,61.766)
N3: (-107.048,-101.751,62.413)
N7: (-110.070,-101.303,60.502)
N9: (-109.409,-101.165,62.632)
O5': (-112.502,-99.087,62.737)
O3': (-109.306,-97.395,64.947)
Image (generated by PyMOL):