Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:Q6:Q16
Extra
PDB:
ATOM 1 O3' C A 5 -19.861 6.550 51.941 1.00 62.79 O
ATOM 2 P A A 6 -19.201 7.988 51.679 1.00 62.74 P
ATOM 3 OP1 A A 6 -19.887 8.974 52.546 1.00 62.79 O
ATOM 4 OP2 A A 6 -19.137 8.226 50.218 1.00 62.78 O
ATOM 5 O5' A A 6 -17.714 7.776 52.224 1.00 62.14 O
ATOM 6 C5' A A 6 -17.495 7.405 53.578 1.00 61.84 C
ATOM 7 C4' A A 6 -16.043 7.042 53.810 1.00 61.68 C
ATOM 8 O4' A A 6 -15.713 5.839 53.070 1.00 61.36 O
ATOM 9 C3' A A 6 -15.028 8.054 53.306 1.00 61.84 C
ATOM 10 O3' A A 6 -14.887 9.150 54.207 1.00 62.88 O
ATOM 11 C2' A A 6 -13.784 7.179 53.226 1.00 61.24 C
ATOM 12 O2' A A 6 -13.224 6.902 54.496 1.00 61.60 O
ATOM 13 C1' A A 6 -14.376 5.917 52.602 1.00 60.59 C
ATOM 14 N9 A A 6 -14.376 5.952 51.138 1.00 59.23 N
ATOM 15 C8 A A 6 -15.446 6.197 50.320 1.00 58.92 C
ATOM 16 N7 A A 6 -15.162 6.175 49.041 1.00 58.48 N
ATOM 17 C5 A A 6 -13.808 5.897 49.014 1.00 58.17 C
ATOM 18 C6 A A 6 -12.896 5.740 47.950 1.00 58.00 C
ATOM 19 N6 A A 6 -13.251 5.850 46.666 1.00 57.78 N
ATOM 20 N1 A A 6 -11.606 5.466 48.255 1.00 57.85 N
ATOM 21 C2 A A 6 -11.258 5.357 49.546 1.00 57.87 C
ATOM 22 N3 A A 6 -12.027 5.485 50.631 1.00 58.12 N
ATOM 23 C4 A A 6 -13.304 5.757 50.296 1.00 58.45 C
ATOM 24 P U A 7 -14.736 10.638 53.629 1.00 63.29 P
ATOM 25 OP1 U A 7 -14.693 11.576 54.776 1.00 63.40 O
ATOM 26 OP2 U A 7 -15.756 10.834 52.573 1.00 62.71 O
ATOM 27 O5' U A 7 -13.277 10.594 52.967 1.00 63.87 O
TER
ATOM 1 O3' C B 15 -3.675 -1.353 49.635 1.00 77.06 O
ATOM 2 P G B 16 -4.109 0.165 49.937 1.00 74.67 P
ATOM 3 OP1 G B 16 -5.213 0.490 49.008 1.00 74.66 O
ATOM 4 OP2 G B 16 -2.897 1.014 49.983 1.00 74.46 O
ATOM 5 O5' G B 16 -4.719 0.119 51.415 1.00 72.26 O
ATOM 6 C5' G B 16 -5.529 -0.971 51.817 1.00 68.70 C
ATOM 7 C4' G B 16 -6.832 -0.525 52.454 1.00 66.01 C
ATOM 8 O4' G B 16 -7.336 0.716 51.898 1.00 64.67 O
ATOM 9 C3' G B 16 -7.997 -1.458 52.190 1.00 64.74 C
ATOM 10 O3' G B 16 -7.867 -2.663 52.918 1.00 63.71 O
ATOM 11 C2' G B 16 -9.163 -0.597 52.663 1.00 64.12 C
ATOM 12 O2' G B 16 -9.314 -0.557 54.071 1.00 64.18 O
ATOM 13 C1' G B 16 -8.742 0.762 52.104 1.00 63.31 C
ATOM 14 N9 G B 16 -9.426 1.048 50.843 1.00 61.77 N
ATOM 15 C8 G B 16 -8.886 1.024 49.580 1.00 61.05 C
ATOM 16 N7 G B 16 -9.743 1.318 48.642 1.00 60.54 N
ATOM 17 C5 G B 16 -10.931 1.548 49.322 1.00 60.23 C
ATOM 18 C6 G B 16 -12.210 1.908 48.832 1.00 60.00 C
ATOM 19 O6 G B 16 -12.554 2.098 47.659 1.00 60.20 O
ATOM 20 N1 G B 16 -13.150 2.047 49.853 1.00 59.82 N
ATOM 21 C2 G B 16 -12.882 1.862 51.189 1.00 59.89 C
ATOM 22 N2 G B 16 -13.913 2.041 52.026 1.00 59.93 N
ATOM 23 N3 G B 16 -11.686 1.527 51.665 1.00 60.22 N
ATOM 24 C4 G B 16 -10.756 1.385 50.679 1.00 60.82 C
ATOM 25 P G B 17 -8.445 -4.010 52.284 1.00 62.97 P
ATOM 26 OP1 G B 17 -7.871 -5.127 53.067 1.00 63.28 O
ATOM 27 OP2 G B 17 -8.246 -3.984 50.817 1.00 63.16 O
ATOM 28 O5' G B 17 -10.016 -3.897 52.587 1.00 61.93 O
TER
ATOM 2 P A A 6 -19.201 7.988 51.679 1.00 62.74 P
ATOM 3 OP1 A A 6 -19.887 8.974 52.546 1.00 62.79 O
ATOM 4 OP2 A A 6 -19.137 8.226 50.218 1.00 62.78 O
ATOM 5 O5' A A 6 -17.714 7.776 52.224 1.00 62.14 O
ATOM 6 C5' A A 6 -17.495 7.405 53.578 1.00 61.84 C
ATOM 7 C4' A A 6 -16.043 7.042 53.810 1.00 61.68 C
ATOM 8 O4' A A 6 -15.713 5.839 53.070 1.00 61.36 O
ATOM 9 C3' A A 6 -15.028 8.054 53.306 1.00 61.84 C
ATOM 10 O3' A A 6 -14.887 9.150 54.207 1.00 62.88 O
ATOM 11 C2' A A 6 -13.784 7.179 53.226 1.00 61.24 C
ATOM 12 O2' A A 6 -13.224 6.902 54.496 1.00 61.60 O
ATOM 13 C1' A A 6 -14.376 5.917 52.602 1.00 60.59 C
ATOM 14 N9 A A 6 -14.376 5.952 51.138 1.00 59.23 N
ATOM 15 C8 A A 6 -15.446 6.197 50.320 1.00 58.92 C
ATOM 16 N7 A A 6 -15.162 6.175 49.041 1.00 58.48 N
ATOM 17 C5 A A 6 -13.808 5.897 49.014 1.00 58.17 C
ATOM 18 C6 A A 6 -12.896 5.740 47.950 1.00 58.00 C
ATOM 19 N6 A A 6 -13.251 5.850 46.666 1.00 57.78 N
ATOM 20 N1 A A 6 -11.606 5.466 48.255 1.00 57.85 N
ATOM 21 C2 A A 6 -11.258 5.357 49.546 1.00 57.87 C
ATOM 22 N3 A A 6 -12.027 5.485 50.631 1.00 58.12 N
ATOM 23 C4 A A 6 -13.304 5.757 50.296 1.00 58.45 C
ATOM 24 P U A 7 -14.736 10.638 53.629 1.00 63.29 P
ATOM 25 OP1 U A 7 -14.693 11.576 54.776 1.00 63.40 O
ATOM 26 OP2 U A 7 -15.756 10.834 52.573 1.00 62.71 O
ATOM 27 O5' U A 7 -13.277 10.594 52.967 1.00 63.87 O
TER
ATOM 1 O3' C B 15 -3.675 -1.353 49.635 1.00 77.06 O
ATOM 2 P G B 16 -4.109 0.165 49.937 1.00 74.67 P
ATOM 3 OP1 G B 16 -5.213 0.490 49.008 1.00 74.66 O
ATOM 4 OP2 G B 16 -2.897 1.014 49.983 1.00 74.46 O
ATOM 5 O5' G B 16 -4.719 0.119 51.415 1.00 72.26 O
ATOM 6 C5' G B 16 -5.529 -0.971 51.817 1.00 68.70 C
ATOM 7 C4' G B 16 -6.832 -0.525 52.454 1.00 66.01 C
ATOM 8 O4' G B 16 -7.336 0.716 51.898 1.00 64.67 O
ATOM 9 C3' G B 16 -7.997 -1.458 52.190 1.00 64.74 C
ATOM 10 O3' G B 16 -7.867 -2.663 52.918 1.00 63.71 O
ATOM 11 C2' G B 16 -9.163 -0.597 52.663 1.00 64.12 C
ATOM 12 O2' G B 16 -9.314 -0.557 54.071 1.00 64.18 O
ATOM 13 C1' G B 16 -8.742 0.762 52.104 1.00 63.31 C
ATOM 14 N9 G B 16 -9.426 1.048 50.843 1.00 61.77 N
ATOM 15 C8 G B 16 -8.886 1.024 49.580 1.00 61.05 C
ATOM 16 N7 G B 16 -9.743 1.318 48.642 1.00 60.54 N
ATOM 17 C5 G B 16 -10.931 1.548 49.322 1.00 60.23 C
ATOM 18 C6 G B 16 -12.210 1.908 48.832 1.00 60.00 C
ATOM 19 O6 G B 16 -12.554 2.098 47.659 1.00 60.20 O
ATOM 20 N1 G B 16 -13.150 2.047 49.853 1.00 59.82 N
ATOM 21 C2 G B 16 -12.882 1.862 51.189 1.00 59.89 C
ATOM 22 N2 G B 16 -13.913 2.041 52.026 1.00 59.93 N
ATOM 23 N3 G B 16 -11.686 1.527 51.665 1.00 60.22 N
ATOM 24 C4 G B 16 -10.756 1.385 50.679 1.00 60.82 C
ATOM 25 P G B 17 -8.445 -4.010 52.284 1.00 62.97 P
ATOM 26 OP1 G B 17 -7.871 -5.127 53.067 1.00 63.28 O
ATOM 27 OP2 G B 17 -8.246 -3.984 50.817 1.00 63.16 O
ATOM 28 O5' G B 17 -10.016 -3.897 52.587 1.00 61.93 O
TER
Atoms:
OP1: (-19.887,8.974,52.546)
OP2: (-19.137,8.226,50.218)
C3': (-15.028,8.054,53.306)
C1': (-14.376,5.917,52.602)
C5': (-17.495,7.405,53.578)
O4': (-15.713,5.839,53.070)
C8: (-15.446,6.197,50.320)
O2': (-13.224,6.902,54.496)
C6: (-12.896,5.740,47.950)
C5: (-13.808,5.897,49.014)
C4: (-13.304,5.757,50.296)
P: (-19.201,7.988,51.679)
C4': (-16.043,7.042,53.810)
C2': (-13.784,7.179,53.226)
C2: (-11.258,5.357,49.546)
N1: (-11.606,5.466,48.255)
N3: (-12.027,5.485,50.631)
N6: (-13.251,5.850,46.666)
N7: (-15.162,6.175,49.041)
N9: (-14.376,5.952,51.138)
O5': (-17.714,7.776,52.224)
O3': (-14.887,9.150,54.207)
OP2: (-19.137,8.226,50.218)
C3': (-15.028,8.054,53.306)
C1': (-14.376,5.917,52.602)
C5': (-17.495,7.405,53.578)
O4': (-15.713,5.839,53.070)
C8: (-15.446,6.197,50.320)
O2': (-13.224,6.902,54.496)
C6: (-12.896,5.740,47.950)
C5: (-13.808,5.897,49.014)
C4: (-13.304,5.757,50.296)
P: (-19.201,7.988,51.679)
C4': (-16.043,7.042,53.810)
C2': (-13.784,7.179,53.226)
C2: (-11.258,5.357,49.546)
N1: (-11.606,5.466,48.255)
N3: (-12.027,5.485,50.631)
N6: (-13.251,5.850,46.666)
N7: (-15.162,6.175,49.041)
N9: (-14.376,5.952,51.138)
O5': (-17.714,7.776,52.224)
O3': (-14.887,9.150,54.207)
OP1: (-5.213,0.490,49.008)
OP2: (-2.897,1.014,49.983)
C3': (-7.997,-1.458,52.190)
C1': (-8.742,0.762,52.104)
C5': (-5.529,-0.971,51.817)
O6: (-12.554,2.098,47.659)
O4': (-7.336,0.716,51.898)
C8: (-8.886,1.024,49.580)
C2: (-12.882,1.862,51.189)
C6: (-12.210,1.908,48.832)
C5: (-10.931,1.548,49.322)
C4: (-10.756,1.385,50.679)
P: (-4.109,0.165,49.937)
C4': (-6.832,-0.525,52.454)
C2': (-9.163,-0.597,52.663)
O2': (-9.314,-0.557,54.071)
N1: (-13.150,2.047,49.853)
N2: (-13.913,2.041,52.026)
N3: (-11.686,1.527,51.665)
N7: (-9.743,1.318,48.642)
N9: (-9.426,1.048,50.843)
O5': (-4.719,0.119,51.415)
O3': (-7.867,-2.663,52.918)
OP2: (-2.897,1.014,49.983)
C3': (-7.997,-1.458,52.190)
C1': (-8.742,0.762,52.104)
C5': (-5.529,-0.971,51.817)
O6: (-12.554,2.098,47.659)
O4': (-7.336,0.716,51.898)
C8: (-8.886,1.024,49.580)
C2: (-12.882,1.862,51.189)
C6: (-12.210,1.908,48.832)
C5: (-10.931,1.548,49.322)
C4: (-10.756,1.385,50.679)
P: (-4.109,0.165,49.937)
C4': (-6.832,-0.525,52.454)
C2': (-9.163,-0.597,52.663)
O2': (-9.314,-0.557,54.071)
N1: (-13.150,2.047,49.853)
N2: (-13.913,2.041,52.026)
N3: (-11.686,1.527,51.665)
N7: (-9.743,1.318,48.642)
N9: (-9.426,1.048,50.843)
O5': (-4.719,0.119,51.415)
O3': (-7.867,-2.663,52.918)
Image (generated by PyMOL):