Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:99:98
Extra
PDB:
ATOM 1 O3' C A 8 51.548 42.131 98.479 1.00 42.33 O
ATOM 2 P C A 9 52.901 43.001 98.452 1.00 41.74 P
ATOM 3 OP1 C A 9 52.551 44.303 99.058 1.00 42.90 O
ATOM 4 OP2 C A 9 53.478 42.958 97.089 1.00 43.59 O
ATOM 5 O5' C A 9 53.917 42.249 99.422 1.00 40.96 O
ATOM 6 C5' C A 9 53.634 42.113 100.821 1.00 41.43 C
ATOM 7 C4' C A 9 54.649 41.209 101.486 1.00 41.60 C
ATOM 8 O4' C A 9 54.738 39.969 100.730 1.00 42.16 O
ATOM 9 C3' C A 9 56.078 41.727 101.622 1.00 39.84 C
ATOM 10 O3' C A 9 56.635 41.225 102.829 1.00 40.87 O
ATOM 11 C2' C A 9 56.786 41.072 100.447 1.00 40.39 C
ATOM 12 O2' C A 9 58.152 40.858 100.710 1.00 42.60 O
ATOM 13 C1' C A 9 56.079 39.724 100.376 1.00 41.53 C
ATOM 14 N1 C A 9 56.103 39.125 99.034 1.00 41.30 N
ATOM 15 C2 C A 9 56.810 37.932 98.829 1.00 42.03 C
ATOM 16 O2 C A 9 57.377 37.385 99.793 1.00 42.18 O
ATOM 17 N3 C A 9 56.855 37.401 97.588 1.00 42.51 N
ATOM 18 C4 C A 9 56.221 38.005 96.580 1.00 43.12 C
ATOM 19 N4 C A 9 56.291 37.449 95.366 1.00 45.10 N
ATOM 20 C5 C A 9 55.485 39.205 96.766 1.00 43.27 C
ATOM 21 C6 C A 9 55.452 39.725 97.995 1.00 42.06 C
ATOM 22 P A A 10 56.764 42.184 104.112 1.00 42.22 P
ATOM 23 OP1 A A 10 55.461 42.854 104.351 1.00 42.01 O
ATOM 24 OP2 A A 10 57.985 43.001 103.936 1.00 42.19 O
ATOM 25 O5' A A 10 57.031 41.178 105.318 1.00 44.03 O
TER
ATOM 1 O3' G B 7 51.911 38.480 93.366 1.00 43.77 O
ATOM 2 P C B 8 52.940 39.560 93.966 1.00 45.34 P
ATOM 3 OP1 C B 8 52.738 40.810 93.192 1.00 44.81 O
ATOM 4 OP2 C B 8 54.292 38.939 94.023 1.00 43.94 O
ATOM 5 O5' C B 8 52.421 39.802 95.454 1.00 42.45 O
ATOM 6 C5' C B 8 51.191 40.501 95.683 1.00 43.25 C
ATOM 7 C4' C B 8 50.701 40.287 97.094 1.00 43.69 C
ATOM 8 O4' C B 8 50.546 38.867 97.342 1.00 42.45 O
ATOM 9 C3' C B 8 51.601 40.728 98.238 1.00 43.56 C
ATOM 10 O3' C B 8 51.548 42.131 98.479 1.00 42.33 O
ATOM 11 C2' C B 8 50.985 39.963 99.402 1.00 43.51 C
ATOM 12 O2' C B 8 49.792 40.551 99.876 1.00 43.71 O
ATOM 13 C1' C B 8 50.649 38.626 98.737 1.00 42.58 C
ATOM 14 N1 C B 8 51.696 37.621 98.986 1.00 42.44 N
ATOM 15 C2 C B 8 51.721 36.984 100.237 1.00 43.04 C
ATOM 16 O2 C B 8 50.831 37.246 101.065 1.00 42.97 O
ATOM 17 N3 C B 8 52.707 36.102 100.508 1.00 41.97 N
ATOM 18 C4 C B 8 53.635 35.839 99.590 1.00 41.84 C
ATOM 19 N4 C B 8 54.602 34.979 99.912 1.00 41.89 N
ATOM 20 C5 C B 8 53.618 36.448 98.300 1.00 41.25 C
ATOM 21 C6 C B 8 52.640 37.323 98.043 1.00 41.59 C
ATOM 22 P C B 9 52.901 43.001 98.452 1.00 41.74 P
ATOM 23 OP1 C B 9 52.551 44.303 99.058 1.00 42.90 O
ATOM 24 OP2 C B 9 53.478 42.958 97.089 1.00 43.59 O
ATOM 25 O5' C B 9 53.917 42.249 99.422 1.00 40.96 O
TER
ATOM 2 P C A 9 52.901 43.001 98.452 1.00 41.74 P
ATOM 3 OP1 C A 9 52.551 44.303 99.058 1.00 42.90 O
ATOM 4 OP2 C A 9 53.478 42.958 97.089 1.00 43.59 O
ATOM 5 O5' C A 9 53.917 42.249 99.422 1.00 40.96 O
ATOM 6 C5' C A 9 53.634 42.113 100.821 1.00 41.43 C
ATOM 7 C4' C A 9 54.649 41.209 101.486 1.00 41.60 C
ATOM 8 O4' C A 9 54.738 39.969 100.730 1.00 42.16 O
ATOM 9 C3' C A 9 56.078 41.727 101.622 1.00 39.84 C
ATOM 10 O3' C A 9 56.635 41.225 102.829 1.00 40.87 O
ATOM 11 C2' C A 9 56.786 41.072 100.447 1.00 40.39 C
ATOM 12 O2' C A 9 58.152 40.858 100.710 1.00 42.60 O
ATOM 13 C1' C A 9 56.079 39.724 100.376 1.00 41.53 C
ATOM 14 N1 C A 9 56.103 39.125 99.034 1.00 41.30 N
ATOM 15 C2 C A 9 56.810 37.932 98.829 1.00 42.03 C
ATOM 16 O2 C A 9 57.377 37.385 99.793 1.00 42.18 O
ATOM 17 N3 C A 9 56.855 37.401 97.588 1.00 42.51 N
ATOM 18 C4 C A 9 56.221 38.005 96.580 1.00 43.12 C
ATOM 19 N4 C A 9 56.291 37.449 95.366 1.00 45.10 N
ATOM 20 C5 C A 9 55.485 39.205 96.766 1.00 43.27 C
ATOM 21 C6 C A 9 55.452 39.725 97.995 1.00 42.06 C
ATOM 22 P A A 10 56.764 42.184 104.112 1.00 42.22 P
ATOM 23 OP1 A A 10 55.461 42.854 104.351 1.00 42.01 O
ATOM 24 OP2 A A 10 57.985 43.001 103.936 1.00 42.19 O
ATOM 25 O5' A A 10 57.031 41.178 105.318 1.00 44.03 O
TER
ATOM 1 O3' G B 7 51.911 38.480 93.366 1.00 43.77 O
ATOM 2 P C B 8 52.940 39.560 93.966 1.00 45.34 P
ATOM 3 OP1 C B 8 52.738 40.810 93.192 1.00 44.81 O
ATOM 4 OP2 C B 8 54.292 38.939 94.023 1.00 43.94 O
ATOM 5 O5' C B 8 52.421 39.802 95.454 1.00 42.45 O
ATOM 6 C5' C B 8 51.191 40.501 95.683 1.00 43.25 C
ATOM 7 C4' C B 8 50.701 40.287 97.094 1.00 43.69 C
ATOM 8 O4' C B 8 50.546 38.867 97.342 1.00 42.45 O
ATOM 9 C3' C B 8 51.601 40.728 98.238 1.00 43.56 C
ATOM 10 O3' C B 8 51.548 42.131 98.479 1.00 42.33 O
ATOM 11 C2' C B 8 50.985 39.963 99.402 1.00 43.51 C
ATOM 12 O2' C B 8 49.792 40.551 99.876 1.00 43.71 O
ATOM 13 C1' C B 8 50.649 38.626 98.737 1.00 42.58 C
ATOM 14 N1 C B 8 51.696 37.621 98.986 1.00 42.44 N
ATOM 15 C2 C B 8 51.721 36.984 100.237 1.00 43.04 C
ATOM 16 O2 C B 8 50.831 37.246 101.065 1.00 42.97 O
ATOM 17 N3 C B 8 52.707 36.102 100.508 1.00 41.97 N
ATOM 18 C4 C B 8 53.635 35.839 99.590 1.00 41.84 C
ATOM 19 N4 C B 8 54.602 34.979 99.912 1.00 41.89 N
ATOM 20 C5 C B 8 53.618 36.448 98.300 1.00 41.25 C
ATOM 21 C6 C B 8 52.640 37.323 98.043 1.00 41.59 C
ATOM 22 P C B 9 52.901 43.001 98.452 1.00 41.74 P
ATOM 23 OP1 C B 9 52.551 44.303 99.058 1.00 42.90 O
ATOM 24 OP2 C B 9 53.478 42.958 97.089 1.00 43.59 O
ATOM 25 O5' C B 9 53.917 42.249 99.422 1.00 40.96 O
TER
Atoms:
C2: (56.810,37.932,98.829)
OP1: (52.551,44.303,99.058)
OP2: (53.478,42.958,97.089)
C4: (56.221,38.005,96.580)
O5': (53.917,42.249,99.422)
C3': (56.078,41.727,101.622)
C1': (56.079,39.724,100.376)
O4': (54.738,39.969,100.730)
C5': (53.634,42.113,100.821)
P: (52.901,43.001,98.452)
O2: (57.377,37.385,99.793)
C4': (54.649,41.209,101.486)
C2': (56.786,41.072,100.447)
O2': (58.152,40.858,100.710)
N1: (56.103,39.125,99.034)
N3: (56.855,37.401,97.588)
N4: (56.291,37.449,95.366)
C6: (55.452,39.725,97.995)
C5: (55.485,39.205,96.766)
O3': (56.635,41.225,102.829)
OP1: (52.551,44.303,99.058)
OP2: (53.478,42.958,97.089)
C4: (56.221,38.005,96.580)
O5': (53.917,42.249,99.422)
C3': (56.078,41.727,101.622)
C1': (56.079,39.724,100.376)
O4': (54.738,39.969,100.730)
C5': (53.634,42.113,100.821)
P: (52.901,43.001,98.452)
O2: (57.377,37.385,99.793)
C4': (54.649,41.209,101.486)
C2': (56.786,41.072,100.447)
O2': (58.152,40.858,100.710)
N1: (56.103,39.125,99.034)
N3: (56.855,37.401,97.588)
N4: (56.291,37.449,95.366)
C6: (55.452,39.725,97.995)
C5: (55.485,39.205,96.766)
O3': (56.635,41.225,102.829)
C2: (51.721,36.984,100.237)
OP1: (52.738,40.810,93.192)
OP2: (54.292,38.939,94.023)
C4: (53.635,35.839,99.590)
O5': (52.421,39.802,95.454)
C3': (51.601,40.728,98.238)
C1': (50.649,38.626,98.737)
O4': (50.546,38.867,97.342)
C5': (51.191,40.501,95.683)
P: (52.940,39.560,93.966)
O2: (50.831,37.246,101.065)
C4': (50.701,40.287,97.094)
C2': (50.985,39.963,99.402)
O2': (49.792,40.551,99.876)
N1: (51.696,37.621,98.986)
N3: (52.707,36.102,100.508)
N4: (54.602,34.979,99.912)
C6: (52.640,37.323,98.043)
C5: (53.618,36.448,98.300)
O3': (51.548,42.131,98.479)
OP1: (52.738,40.810,93.192)
OP2: (54.292,38.939,94.023)
C4: (53.635,35.839,99.590)
O5': (52.421,39.802,95.454)
C3': (51.601,40.728,98.238)
C1': (50.649,38.626,98.737)
O4': (50.546,38.867,97.342)
C5': (51.191,40.501,95.683)
P: (52.940,39.560,93.966)
O2: (50.831,37.246,101.065)
C4': (50.701,40.287,97.094)
C2': (50.985,39.963,99.402)
O2': (49.792,40.551,99.876)
N1: (51.696,37.621,98.986)
N3: (52.707,36.102,100.508)
N4: (54.602,34.979,99.912)
C6: (52.640,37.323,98.043)
C5: (53.618,36.448,98.300)
O3': (51.548,42.131,98.479)
Image (generated by PyMOL):