Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1250:1248
Extra
PDB:
ATOM 1 O3' U A 249 73.696 -49.196 160.855 1.00191.01 O
ATOM 2 P A A 250 72.730 -50.273 160.150 1.00133.17 P
ATOM 3 OP1 A A 250 71.663 -50.614 161.139 1.00133.62 O
ATOM 4 OP2 A A 250 73.602 -51.367 159.633 1.00133.32 O
ATOM 5 O5' A A 250 72.107 -49.445 158.926 1.00132.10 O
ATOM 6 C5' A A 250 71.509 -48.171 159.137 1.00131.80 C
ATOM 7 C4' A A 250 71.920 -47.171 158.080 1.00131.03 C
ATOM 8 O4' A A 250 73.353 -46.963 158.113 1.00131.32 O
ATOM 9 C3' A A 250 71.668 -47.574 156.646 1.00130.22 C
ATOM 10 O3' A A 250 70.325 -47.457 156.264 1.00129.69 O
ATOM 11 C2' A A 250 72.601 -46.658 155.885 1.00129.78 C
ATOM 12 O2' A A 250 72.080 -45.336 155.849 1.00129.36 O
ATOM 13 C1' A A 250 73.818 -46.677 156.807 1.00130.59 C
ATOM 14 N9 A A 250 74.793 -47.716 156.417 1.00130.81 N
ATOM 15 C8 A A 250 75.061 -48.909 157.040 1.00131.51 C
ATOM 16 N7 A A 250 75.993 -49.616 156.447 1.00131.55 N
ATOM 17 C5 A A 250 76.367 -48.837 155.363 1.00130.82 C
ATOM 18 C6 A A 250 77.313 -49.021 154.338 1.00130.49 C
ATOM 19 N6 A A 250 78.088 -50.099 154.240 1.00130.88 N
ATOM 20 N1 A A 250 77.436 -48.051 153.402 1.00129.76 N
ATOM 21 C2 A A 250 76.653 -46.970 153.499 1.00129.39 C
ATOM 22 N3 A A 250 75.730 -46.682 154.416 1.00129.64 N
ATOM 23 C4 A A 250 75.634 -47.665 155.333 1.00130.36 C
ATOM 24 P A A 251 69.601 -48.724 155.613 1.00 96.73 P
ATOM 25 OP1 A A 251 68.131 -48.519 155.768 1.00 96.48 O
ATOM 26 OP2 A A 251 70.223 -49.936 156.225 1.00 97.49 O
ATOM 27 O5' A A 251 70.026 -48.608 154.076 1.00 95.91 O
TER
ATOM 1 O3' U B 247 75.507 -40.451 157.805 1.00208.67 O
ATOM 2 P G B 248 74.755 -41.879 157.888 1.00173.49 P
ATOM 3 OP1 G B 248 74.154 -42.135 156.552 1.00172.62 O
ATOM 4 OP2 G B 248 73.859 -41.837 159.074 1.00174.00 O
ATOM 5 O5' G B 248 75.956 -42.908 158.149 1.00174.12 O
ATOM 6 C5' G B 248 76.560 -43.040 159.441 1.00175.07 C
ATOM 7 C4' G B 248 76.288 -44.391 160.059 1.00175.65 C
ATOM 8 O4' G B 248 76.244 -45.394 159.021 1.00175.22 O
ATOM 9 C3' G B 248 77.322 -44.858 161.068 1.00176.62 C
ATOM 10 O3' G B 248 76.679 -45.635 162.086 1.00177.26 O
ATOM 11 C2' G B 248 78.271 -45.730 160.231 1.00176.52 C
ATOM 12 O2' G B 248 78.873 -46.795 160.947 1.00177.34 O
ATOM 13 C1' G B 248 77.374 -46.245 159.088 1.00175.71 C
ATOM 14 N9 G B 248 78.006 -46.192 157.759 1.00175.05 N
ATOM 15 C8 G B 248 77.600 -45.236 156.856 1.00174.22 C
ATOM 16 N7 G B 248 78.190 -45.290 155.703 1.00173.69 N
ATOM 17 C5 G B 248 79.054 -46.359 155.835 1.00174.21 C
ATOM 18 C6 G B 248 79.953 -46.866 154.872 1.00173.98 C
ATOM 19 O6 G B 248 80.147 -46.444 153.724 1.00173.28 O
ATOM 20 N1 G B 248 80.647 -47.962 155.368 1.00174.69 N
ATOM 21 C2 G B 248 80.489 -48.494 156.624 1.00175.51 C
ATOM 22 N2 G B 248 81.259 -49.556 156.901 1.00176.13 N
ATOM 23 N3 G B 248 79.647 -48.025 157.538 1.00175.74 N
ATOM 24 C4 G B 248 78.951 -46.957 157.084 1.00175.05 C
ATOM 25 P U B 249 75.908 -44.896 163.300 1.00192.10 P
ATOM 26 OP1 U B 249 75.079 -43.815 162.712 1.00191.32 O
ATOM 27 OP2 U B 249 76.937 -44.534 164.306 1.00192.91 O
ATOM 28 O5' U B 249 74.960 -46.035 163.880 1.00192.48 O
TER
ATOM 2 P A A 250 72.730 -50.273 160.150 1.00133.17 P
ATOM 3 OP1 A A 250 71.663 -50.614 161.139 1.00133.62 O
ATOM 4 OP2 A A 250 73.602 -51.367 159.633 1.00133.32 O
ATOM 5 O5' A A 250 72.107 -49.445 158.926 1.00132.10 O
ATOM 6 C5' A A 250 71.509 -48.171 159.137 1.00131.80 C
ATOM 7 C4' A A 250 71.920 -47.171 158.080 1.00131.03 C
ATOM 8 O4' A A 250 73.353 -46.963 158.113 1.00131.32 O
ATOM 9 C3' A A 250 71.668 -47.574 156.646 1.00130.22 C
ATOM 10 O3' A A 250 70.325 -47.457 156.264 1.00129.69 O
ATOM 11 C2' A A 250 72.601 -46.658 155.885 1.00129.78 C
ATOM 12 O2' A A 250 72.080 -45.336 155.849 1.00129.36 O
ATOM 13 C1' A A 250 73.818 -46.677 156.807 1.00130.59 C
ATOM 14 N9 A A 250 74.793 -47.716 156.417 1.00130.81 N
ATOM 15 C8 A A 250 75.061 -48.909 157.040 1.00131.51 C
ATOM 16 N7 A A 250 75.993 -49.616 156.447 1.00131.55 N
ATOM 17 C5 A A 250 76.367 -48.837 155.363 1.00130.82 C
ATOM 18 C6 A A 250 77.313 -49.021 154.338 1.00130.49 C
ATOM 19 N6 A A 250 78.088 -50.099 154.240 1.00130.88 N
ATOM 20 N1 A A 250 77.436 -48.051 153.402 1.00129.76 N
ATOM 21 C2 A A 250 76.653 -46.970 153.499 1.00129.39 C
ATOM 22 N3 A A 250 75.730 -46.682 154.416 1.00129.64 N
ATOM 23 C4 A A 250 75.634 -47.665 155.333 1.00130.36 C
ATOM 24 P A A 251 69.601 -48.724 155.613 1.00 96.73 P
ATOM 25 OP1 A A 251 68.131 -48.519 155.768 1.00 96.48 O
ATOM 26 OP2 A A 251 70.223 -49.936 156.225 1.00 97.49 O
ATOM 27 O5' A A 251 70.026 -48.608 154.076 1.00 95.91 O
TER
ATOM 1 O3' U B 247 75.507 -40.451 157.805 1.00208.67 O
ATOM 2 P G B 248 74.755 -41.879 157.888 1.00173.49 P
ATOM 3 OP1 G B 248 74.154 -42.135 156.552 1.00172.62 O
ATOM 4 OP2 G B 248 73.859 -41.837 159.074 1.00174.00 O
ATOM 5 O5' G B 248 75.956 -42.908 158.149 1.00174.12 O
ATOM 6 C5' G B 248 76.560 -43.040 159.441 1.00175.07 C
ATOM 7 C4' G B 248 76.288 -44.391 160.059 1.00175.65 C
ATOM 8 O4' G B 248 76.244 -45.394 159.021 1.00175.22 O
ATOM 9 C3' G B 248 77.322 -44.858 161.068 1.00176.62 C
ATOM 10 O3' G B 248 76.679 -45.635 162.086 1.00177.26 O
ATOM 11 C2' G B 248 78.271 -45.730 160.231 1.00176.52 C
ATOM 12 O2' G B 248 78.873 -46.795 160.947 1.00177.34 O
ATOM 13 C1' G B 248 77.374 -46.245 159.088 1.00175.71 C
ATOM 14 N9 G B 248 78.006 -46.192 157.759 1.00175.05 N
ATOM 15 C8 G B 248 77.600 -45.236 156.856 1.00174.22 C
ATOM 16 N7 G B 248 78.190 -45.290 155.703 1.00173.69 N
ATOM 17 C5 G B 248 79.054 -46.359 155.835 1.00174.21 C
ATOM 18 C6 G B 248 79.953 -46.866 154.872 1.00173.98 C
ATOM 19 O6 G B 248 80.147 -46.444 153.724 1.00173.28 O
ATOM 20 N1 G B 248 80.647 -47.962 155.368 1.00174.69 N
ATOM 21 C2 G B 248 80.489 -48.494 156.624 1.00175.51 C
ATOM 22 N2 G B 248 81.259 -49.556 156.901 1.00176.13 N
ATOM 23 N3 G B 248 79.647 -48.025 157.538 1.00175.74 N
ATOM 24 C4 G B 248 78.951 -46.957 157.084 1.00175.05 C
ATOM 25 P U B 249 75.908 -44.896 163.300 1.00192.10 P
ATOM 26 OP1 U B 249 75.079 -43.815 162.712 1.00191.32 O
ATOM 27 OP2 U B 249 76.937 -44.534 164.306 1.00192.91 O
ATOM 28 O5' U B 249 74.960 -46.035 163.880 1.00192.48 O
TER
Atoms:
OP1: (71.663,-50.614,161.139)
OP2: (73.602,-51.367,159.633)
C3': (71.668,-47.574,156.646)
C1': (73.818,-46.677,156.807)
C5': (71.509,-48.171,159.137)
O4': (73.353,-46.963,158.113)
C8: (75.061,-48.909,157.040)
O2': (72.080,-45.336,155.849)
C6: (77.313,-49.021,154.338)
C5: (76.367,-48.837,155.363)
C4: (75.634,-47.665,155.333)
P: (72.730,-50.273,160.150)
C4': (71.920,-47.171,158.080)
C2': (72.601,-46.658,155.885)
C2: (76.653,-46.970,153.499)
N1: (77.436,-48.051,153.402)
N3: (75.730,-46.682,154.416)
N6: (78.088,-50.099,154.240)
N7: (75.993,-49.616,156.447)
N9: (74.793,-47.716,156.417)
O5': (72.107,-49.445,158.926)
O3': (70.325,-47.457,156.264)
OP2: (73.602,-51.367,159.633)
C3': (71.668,-47.574,156.646)
C1': (73.818,-46.677,156.807)
C5': (71.509,-48.171,159.137)
O4': (73.353,-46.963,158.113)
C8: (75.061,-48.909,157.040)
O2': (72.080,-45.336,155.849)
C6: (77.313,-49.021,154.338)
C5: (76.367,-48.837,155.363)
C4: (75.634,-47.665,155.333)
P: (72.730,-50.273,160.150)
C4': (71.920,-47.171,158.080)
C2': (72.601,-46.658,155.885)
C2: (76.653,-46.970,153.499)
N1: (77.436,-48.051,153.402)
N3: (75.730,-46.682,154.416)
N6: (78.088,-50.099,154.240)
N7: (75.993,-49.616,156.447)
N9: (74.793,-47.716,156.417)
O5': (72.107,-49.445,158.926)
O3': (70.325,-47.457,156.264)
OP1: (74.154,-42.135,156.552)
OP2: (73.859,-41.837,159.074)
C3': (77.322,-44.858,161.068)
C1': (77.374,-46.245,159.088)
C5': (76.560,-43.040,159.441)
O6: (80.147,-46.444,153.724)
O4': (76.244,-45.394,159.021)
C8: (77.600,-45.236,156.856)
C2: (80.489,-48.494,156.624)
C6: (79.953,-46.866,154.872)
C5: (79.054,-46.359,155.835)
C4: (78.951,-46.957,157.084)
P: (74.755,-41.879,157.888)
C4': (76.288,-44.391,160.059)
C2': (78.271,-45.730,160.231)
O2': (78.873,-46.795,160.947)
N1: (80.647,-47.962,155.368)
N2: (81.259,-49.556,156.901)
N3: (79.647,-48.025,157.538)
N7: (78.190,-45.290,155.703)
N9: (78.006,-46.192,157.759)
O5': (75.956,-42.908,158.149)
O3': (76.679,-45.635,162.086)
OP2: (73.859,-41.837,159.074)
C3': (77.322,-44.858,161.068)
C1': (77.374,-46.245,159.088)
C5': (76.560,-43.040,159.441)
O6: (80.147,-46.444,153.724)
O4': (76.244,-45.394,159.021)
C8: (77.600,-45.236,156.856)
C2: (80.489,-48.494,156.624)
C6: (79.953,-46.866,154.872)
C5: (79.054,-46.359,155.835)
C4: (78.951,-46.957,157.084)
P: (74.755,-41.879,157.888)
C4': (76.288,-44.391,160.059)
C2': (78.271,-45.730,160.231)
O2': (78.873,-46.795,160.947)
N1: (80.647,-47.962,155.368)
N2: (81.259,-49.556,156.901)
N3: (79.647,-48.025,157.538)
N7: (78.190,-45.290,155.703)
N9: (78.006,-46.192,157.759)
O5': (75.956,-42.908,158.149)
O3': (76.679,-45.635,162.086)
Image (generated by PyMOL):