Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:D13:D18
Extra
PDB:
ATOM 1 O3' C A 12 5.096 -17.842 26.395 1.00 33.23 O
ATOM 2 P A A 13 5.982 -18.344 27.647 1.00 32.22 P
ATOM 3 OP1 A A 13 6.957 -19.360 27.181 1.00 33.29 O
ATOM 4 OP2 A A 13 5.071 -18.663 28.777 1.00 31.95 O
ATOM 5 O5' A A 13 6.811 -17.054 28.080 1.00 32.17 O
ATOM 6 C5' A A 13 7.623 -16.344 27.149 1.00 26.54 C
ATOM 7 C4' A A 13 8.026 -15.004 27.725 1.00 24.77 C
ATOM 8 O4' A A 13 6.834 -14.218 28.000 1.00 23.55 O
ATOM 9 C3' A A 13 8.756 -15.017 29.060 1.00 23.02 C
ATOM 10 O3' A A 13 10.149 -15.252 28.864 1.00 22.72 O
ATOM 11 C2' A A 13 8.524 -13.590 29.532 1.00 22.86 C
ATOM 12 O2' A A 13 9.331 -12.705 28.775 1.00 24.10 O
ATOM 13 C1' A A 13 7.075 -13.365 29.106 1.00 21.95 C
ATOM 14 N9 A A 13 6.052 -13.613 30.125 1.00 20.62 N
ATOM 15 C8 A A 13 5.231 -14.711 30.239 1.00 18.72 C
ATOM 16 N7 A A 13 4.366 -14.626 31.219 1.00 18.44 N
ATOM 17 C5 A A 13 4.640 -13.398 31.806 1.00 18.86 C
ATOM 18 C6 A A 13 4.061 -12.715 32.905 1.00 18.97 C
ATOM 19 N6 A A 13 3.049 -13.205 33.626 1.00 18.29 N
ATOM 20 N1 A A 13 4.566 -11.498 33.234 1.00 18.71 N
ATOM 21 C2 A A 13 5.579 -11.011 32.502 1.00 20.83 C
ATOM 22 N3 A A 13 6.208 -11.557 31.447 1.00 21.91 N
ATOM 23 C4 A A 13 5.684 -12.765 31.148 1.00 20.50 C
ATOM 24 P U A 14 11.048 -15.835 30.071 1.00 21.72 P
ATOM 25 OP1 U A 14 12.205 -16.546 29.470 1.00 22.92 O
ATOM 26 OP2 U A 14 10.162 -16.539 31.023 1.00 18.96 O
ATOM 27 O5' U A 14 11.637 -14.562 30.827 1.00 22.04 O
TER
ATOM 1 O3' C B 17 8.366 -7.300 36.943 1.00 17.32 O
ATOM 2 P G B 18 7.045 -7.921 36.291 1.00 14.54 P
ATOM 3 OP1 G B 18 5.947 -7.665 37.248 1.00 13.62 O
ATOM 4 OP2 G B 18 7.346 -9.304 35.856 1.00 19.25 O
ATOM 5 O5' G B 18 6.757 -7.004 35.031 1.00 13.92 O
ATOM 6 C5' G B 18 7.651 -6.901 33.933 1.00 15.87 C
ATOM 7 C4' G B 18 6.892 -6.306 32.783 1.00 17.68 C
ATOM 8 O4' G B 18 5.870 -7.237 32.434 1.00 20.03 O
ATOM 9 C3' G B 18 6.195 -4.998 33.156 1.00 18.99 C
ATOM 10 O3' G B 18 6.898 -4.039 32.383 1.00 17.26 O
ATOM 11 C2' G B 18 4.746 -5.122 32.650 1.00 20.30 C
ATOM 12 O2' G B 18 4.383 -4.243 31.599 1.00 30.11 O
ATOM 13 C1' G B 18 4.703 -6.545 32.105 1.00 19.06 C
ATOM 14 N9 G B 18 3.574 -7.420 32.362 1.00 18.32 N
ATOM 15 C8 G B 18 2.629 -7.386 33.353 1.00 17.15 C
ATOM 16 N7 G B 18 1.773 -8.370 33.264 1.00 19.42 N
ATOM 17 C5 G B 18 2.188 -9.081 32.145 1.00 18.58 C
ATOM 18 C6 G B 18 1.668 -10.251 31.546 1.00 18.31 C
ATOM 19 O6 G B 18 0.699 -10.926 31.892 1.00 22.86 O
ATOM 20 N1 G B 18 2.409 -10.623 30.426 1.00 17.91 N
ATOM 21 C2 G B 18 3.515 -9.954 29.946 1.00 14.99 C
ATOM 22 N2 G B 18 4.110 -10.461 28.864 1.00 11.84 N
ATOM 23 N3 G B 18 3.999 -8.871 30.495 1.00 15.16 N
ATOM 24 C4 G B 18 3.292 -8.496 31.582 1.00 17.96 C
ATOM 25 P A B 19 7.114 -2.546 32.898 1.00 17.80 P
ATOM 26 OP1 A B 19 7.094 -2.533 34.378 1.00 18.31 O
ATOM 27 OP2 A B 19 6.181 -1.666 32.145 1.00 17.69 O
ATOM 28 O5' A B 19 8.605 -2.308 32.390 1.00 17.52 O
TER
ATOM 2 P A A 13 5.982 -18.344 27.647 1.00 32.22 P
ATOM 3 OP1 A A 13 6.957 -19.360 27.181 1.00 33.29 O
ATOM 4 OP2 A A 13 5.071 -18.663 28.777 1.00 31.95 O
ATOM 5 O5' A A 13 6.811 -17.054 28.080 1.00 32.17 O
ATOM 6 C5' A A 13 7.623 -16.344 27.149 1.00 26.54 C
ATOM 7 C4' A A 13 8.026 -15.004 27.725 1.00 24.77 C
ATOM 8 O4' A A 13 6.834 -14.218 28.000 1.00 23.55 O
ATOM 9 C3' A A 13 8.756 -15.017 29.060 1.00 23.02 C
ATOM 10 O3' A A 13 10.149 -15.252 28.864 1.00 22.72 O
ATOM 11 C2' A A 13 8.524 -13.590 29.532 1.00 22.86 C
ATOM 12 O2' A A 13 9.331 -12.705 28.775 1.00 24.10 O
ATOM 13 C1' A A 13 7.075 -13.365 29.106 1.00 21.95 C
ATOM 14 N9 A A 13 6.052 -13.613 30.125 1.00 20.62 N
ATOM 15 C8 A A 13 5.231 -14.711 30.239 1.00 18.72 C
ATOM 16 N7 A A 13 4.366 -14.626 31.219 1.00 18.44 N
ATOM 17 C5 A A 13 4.640 -13.398 31.806 1.00 18.86 C
ATOM 18 C6 A A 13 4.061 -12.715 32.905 1.00 18.97 C
ATOM 19 N6 A A 13 3.049 -13.205 33.626 1.00 18.29 N
ATOM 20 N1 A A 13 4.566 -11.498 33.234 1.00 18.71 N
ATOM 21 C2 A A 13 5.579 -11.011 32.502 1.00 20.83 C
ATOM 22 N3 A A 13 6.208 -11.557 31.447 1.00 21.91 N
ATOM 23 C4 A A 13 5.684 -12.765 31.148 1.00 20.50 C
ATOM 24 P U A 14 11.048 -15.835 30.071 1.00 21.72 P
ATOM 25 OP1 U A 14 12.205 -16.546 29.470 1.00 22.92 O
ATOM 26 OP2 U A 14 10.162 -16.539 31.023 1.00 18.96 O
ATOM 27 O5' U A 14 11.637 -14.562 30.827 1.00 22.04 O
TER
ATOM 1 O3' C B 17 8.366 -7.300 36.943 1.00 17.32 O
ATOM 2 P G B 18 7.045 -7.921 36.291 1.00 14.54 P
ATOM 3 OP1 G B 18 5.947 -7.665 37.248 1.00 13.62 O
ATOM 4 OP2 G B 18 7.346 -9.304 35.856 1.00 19.25 O
ATOM 5 O5' G B 18 6.757 -7.004 35.031 1.00 13.92 O
ATOM 6 C5' G B 18 7.651 -6.901 33.933 1.00 15.87 C
ATOM 7 C4' G B 18 6.892 -6.306 32.783 1.00 17.68 C
ATOM 8 O4' G B 18 5.870 -7.237 32.434 1.00 20.03 O
ATOM 9 C3' G B 18 6.195 -4.998 33.156 1.00 18.99 C
ATOM 10 O3' G B 18 6.898 -4.039 32.383 1.00 17.26 O
ATOM 11 C2' G B 18 4.746 -5.122 32.650 1.00 20.30 C
ATOM 12 O2' G B 18 4.383 -4.243 31.599 1.00 30.11 O
ATOM 13 C1' G B 18 4.703 -6.545 32.105 1.00 19.06 C
ATOM 14 N9 G B 18 3.574 -7.420 32.362 1.00 18.32 N
ATOM 15 C8 G B 18 2.629 -7.386 33.353 1.00 17.15 C
ATOM 16 N7 G B 18 1.773 -8.370 33.264 1.00 19.42 N
ATOM 17 C5 G B 18 2.188 -9.081 32.145 1.00 18.58 C
ATOM 18 C6 G B 18 1.668 -10.251 31.546 1.00 18.31 C
ATOM 19 O6 G B 18 0.699 -10.926 31.892 1.00 22.86 O
ATOM 20 N1 G B 18 2.409 -10.623 30.426 1.00 17.91 N
ATOM 21 C2 G B 18 3.515 -9.954 29.946 1.00 14.99 C
ATOM 22 N2 G B 18 4.110 -10.461 28.864 1.00 11.84 N
ATOM 23 N3 G B 18 3.999 -8.871 30.495 1.00 15.16 N
ATOM 24 C4 G B 18 3.292 -8.496 31.582 1.00 17.96 C
ATOM 25 P A B 19 7.114 -2.546 32.898 1.00 17.80 P
ATOM 26 OP1 A B 19 7.094 -2.533 34.378 1.00 18.31 O
ATOM 27 OP2 A B 19 6.181 -1.666 32.145 1.00 17.69 O
ATOM 28 O5' A B 19 8.605 -2.308 32.390 1.00 17.52 O
TER
Atoms:
OP1: (6.957,-19.360,27.181)
OP2: (5.071,-18.663,28.777)
C3': (8.756,-15.017,29.060)
C1': (7.075,-13.365,29.106)
C5': (7.623,-16.344,27.149)
O4': (6.834,-14.218,28.000)
C8: (5.231,-14.711,30.239)
O2': (9.331,-12.705,28.775)
C6: (4.061,-12.715,32.905)
C5: (4.640,-13.398,31.806)
C4: (5.684,-12.765,31.148)
P: (5.982,-18.344,27.647)
C4': (8.026,-15.004,27.725)
C2': (8.524,-13.590,29.532)
C2: (5.579,-11.011,32.502)
N1: (4.566,-11.498,33.234)
N3: (6.208,-11.557,31.447)
N6: (3.049,-13.205,33.626)
N7: (4.366,-14.626,31.219)
N9: (6.052,-13.613,30.125)
O5': (6.811,-17.054,28.080)
O3': (10.149,-15.252,28.864)
OP2: (5.071,-18.663,28.777)
C3': (8.756,-15.017,29.060)
C1': (7.075,-13.365,29.106)
C5': (7.623,-16.344,27.149)
O4': (6.834,-14.218,28.000)
C8: (5.231,-14.711,30.239)
O2': (9.331,-12.705,28.775)
C6: (4.061,-12.715,32.905)
C5: (4.640,-13.398,31.806)
C4: (5.684,-12.765,31.148)
P: (5.982,-18.344,27.647)
C4': (8.026,-15.004,27.725)
C2': (8.524,-13.590,29.532)
C2: (5.579,-11.011,32.502)
N1: (4.566,-11.498,33.234)
N3: (6.208,-11.557,31.447)
N6: (3.049,-13.205,33.626)
N7: (4.366,-14.626,31.219)
N9: (6.052,-13.613,30.125)
O5': (6.811,-17.054,28.080)
O3': (10.149,-15.252,28.864)
OP1: (5.947,-7.665,37.248)
OP2: (7.346,-9.304,35.856)
C3': (6.195,-4.998,33.156)
C1': (4.703,-6.545,32.105)
C5': (7.651,-6.901,33.933)
O6: (0.699,-10.926,31.892)
O4': (5.870,-7.237,32.434)
C8: (2.629,-7.386,33.353)
C2: (3.515,-9.954,29.946)
C6: (1.668,-10.251,31.546)
C5: (2.188,-9.081,32.145)
C4: (3.292,-8.496,31.582)
P: (7.045,-7.921,36.291)
C4': (6.892,-6.306,32.783)
C2': (4.746,-5.122,32.650)
O2': (4.383,-4.243,31.599)
N1: (2.409,-10.623,30.426)
N2: (4.110,-10.461,28.864)
N3: (3.999,-8.871,30.495)
N7: (1.773,-8.370,33.264)
N9: (3.574,-7.420,32.362)
O5': (6.757,-7.004,35.031)
O3': (6.898,-4.039,32.383)
OP2: (7.346,-9.304,35.856)
C3': (6.195,-4.998,33.156)
C1': (4.703,-6.545,32.105)
C5': (7.651,-6.901,33.933)
O6: (0.699,-10.926,31.892)
O4': (5.870,-7.237,32.434)
C8: (2.629,-7.386,33.353)
C2: (3.515,-9.954,29.946)
C6: (1.668,-10.251,31.546)
C5: (2.188,-9.081,32.145)
C4: (3.292,-8.496,31.582)
P: (7.045,-7.921,36.291)
C4': (6.892,-6.306,32.783)
C2': (4.746,-5.122,32.650)
O2': (4.383,-4.243,31.599)
N1: (2.409,-10.623,30.426)
N2: (4.110,-10.461,28.864)
N3: (3.999,-8.871,30.495)
N7: (1.773,-8.370,33.264)
N9: (3.574,-7.420,32.362)
O5': (6.757,-7.004,35.031)
O3': (6.898,-4.039,32.383)
Image (generated by PyMOL):