ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2G5Q:B12:B11

Extra

PDB:
ATOM 1 O3' G A 11 26.844 -4.842 10.054 1.00 33.63 O
ATOM 2 P U A 12 27.554 -3.694 9.175 1.00 34.66 P
ATOM 3 OP1 U A 12 28.940 -4.130 8.870 1.00 27.72 O
ATOM 4 OP2 U A 12 27.320 -2.413 9.888 1.00 28.59 O
ATOM 5 O5' U A 12 26.734 -3.647 7.805 1.00 36.07 O
ATOM 6 C5' U A 12 26.597 -4.804 6.992 1.00 28.61 C
ATOM 7 C4' U A 12 25.611 -4.550 5.882 1.00 27.03 C
ATOM 8 O4' U A 12 24.298 -4.283 6.439 1.00 34.58 O
ATOM 9 C3' U A 12 25.878 -3.315 5.052 1.00 30.60 C
ATOM 10 O3' U A 12 26.848 -3.567 4.064 1.00 30.36 O
ATOM 11 C2' U A 12 24.521 -3.070 4.425 1.00 23.62 C
ATOM 12 O2' U A 12 24.274 -4.050 3.446 1.00 20.90 O
ATOM 13 C1' U A 12 23.607 -3.354 5.610 1.00 31.27 C
ATOM 14 N1 U A 12 23.294 -2.160 6.408 1.00 35.62 N
ATOM 15 C2 U A 12 22.268 -1.340 5.965 1.00 33.19 C
ATOM 16 O2 U A 12 21.666 -1.545 4.937 1.00 30.49 O
ATOM 17 N3 U A 12 21.980 -0.272 6.781 1.00 31.83 N
ATOM 18 C4 U A 12 22.608 0.054 7.967 1.00 33.67 C
ATOM 19 O4 U A 12 22.206 1.016 8.621 1.00 39.95 O
ATOM 20 C5 U A 12 23.677 -0.826 8.341 1.00 30.41 C
ATOM 21 C6 U A 12 23.978 -1.874 7.567 1.00 26.05 C
ATOM 22 P G A 13 27.805 -2.374 3.604 1.00 33.08 P
ATOM 23 OP1 G A 13 28.784 -2.947 2.653 1.00 28.99 O
ATOM 24 OP2 G A 13 28.273 -1.706 4.841 1.00 38.70 O
ATOM 25 O5' G A 13 26.835 -1.364 2.852 1.00 28.03 O
TER

ATOM 1 O3' G B 10 25.686 -4.388 16.448 1.00 46.87 O
ATOM 2 P G B 11 26.434 -3.383 15.454 1.00 51.86 P
ATOM 3 OP1 G B 11 27.871 -3.694 15.580 1.00 52.38 O
ATOM 4 OP2 G B 11 25.950 -2.017 15.762 1.00 58.30 O
ATOM 5 O5' G B 11 25.929 -3.798 13.993 1.00 50.76 O
ATOM 6 C5' G B 11 26.424 -4.978 13.352 1.00 39.75 C
ATOM 7 C4' G B 11 25.595 -5.337 12.126 1.00 31.38 C
ATOM 8 O4' G B 11 24.193 -5.151 12.443 1.00 34.15 O
ATOM 9 C3' G B 11 25.725 -4.505 10.858 1.00 30.05 C
ATOM 10 O3' G B 11 26.844 -4.842 10.054 1.00 33.63 O
ATOM 11 C2' G B 11 24.481 -4.931 10.119 1.00 26.55 C
ATOM 12 O2' G B 11 24.630 -6.248 9.660 1.00 37.54 O
ATOM 13 C1' G B 11 23.464 -4.929 11.247 1.00 29.26 C
ATOM 14 N9 G B 11 22.759 -3.654 11.341 1.00 31.42 N
ATOM 15 C8 G B 11 22.835 -2.726 12.348 1.00 30.06 C
ATOM 16 N7 G B 11 22.053 -1.695 12.154 1.00 27.92 N
ATOM 17 C5 G B 11 21.434 -1.953 10.941 1.00 28.95 C
ATOM 18 C6 G B 11 20.475 -1.195 10.219 1.00 37.01 C
ATOM 19 O6 G B 11 19.960 -0.111 10.528 1.00 43.12 O
ATOM 20 N1 G B 11 20.115 -1.825 9.031 1.00 31.01 N
ATOM 21 C2 G B 11 20.613 -3.028 8.597 1.00 37.00 C
ATOM 22 N2 G B 11 20.158 -3.470 7.420 1.00 42.67 N
ATOM 23 N3 G B 11 21.498 -3.745 9.263 1.00 33.12 N
ATOM 24 C4 G B 11 21.862 -3.153 10.420 1.00 32.06 C
ATOM 25 P U B 12 27.554 -3.694 9.175 1.00 34.66 P
ATOM 26 OP1 U B 12 28.940 -4.130 8.870 1.00 27.72 O
ATOM 27 OP2 U B 12 27.320 -2.413 9.888 1.00 28.59 O
ATOM 28 O5' U B 12 26.734 -3.647 7.805 1.00 36.07 O
TER

Atoms:
C4: (22.608,0.054,7.967)
N3: (21.980,-0.272,6.781)
OP1: (28.940,-4.130,8.870)
OP2: (27.320,-2.413,9.888)
C2: (22.268,-1.340,5.965)
C1': (23.607,-3.354,5.610)
C3': (25.878,-3.315,5.052)
O5': (26.734,-3.647,7.805)
O4': (24.298,-4.283,6.439)
C5': (26.597,-4.804,6.992)
P: (27.554,-3.694,9.175)
C4': (25.611,-4.550,5.882)
C2': (24.521,-3.070,4.425)
O2': (24.274,-4.050,3.446)
N1: (23.294,-2.160,6.408)
O4: (22.206,1.016,8.621)
O2: (21.666,-1.545,4.937)
C6: (23.978,-1.874,7.567)
C5: (23.677,-0.826,8.341)
O3': (26.848,-3.567,4.064)
OP1: (27.871,-3.694,15.580)
OP2: (25.950,-2.017,15.762)
C3': (25.725,-4.505,10.858)
C1': (23.464,-4.929,11.247)
C5': (26.424,-4.978,13.352)
O6: (19.960,-0.111,10.528)
O4': (24.193,-5.151,12.443)
C8: (22.835,-2.726,12.348)
C2: (20.613,-3.028,8.597)
C6: (20.475,-1.195,10.219)
C5: (21.434,-1.953,10.941)
C4: (21.862,-3.153,10.420)
P: (26.434,-3.383,15.454)
C4': (25.595,-5.337,12.126)
C2': (24.481,-4.931,10.119)
O2': (24.630,-6.248,9.660)
N1: (20.115,-1.825,9.031)
N2: (20.158,-3.470,7.420)
N3: (21.498,-3.745,9.263)
N7: (22.053,-1.695,12.154)
N9: (22.759,-3.654,11.341)
O5': (25.929,-3.798,13.993)
O3': (26.844,-4.842,10.054)
Image (generated by PyMOL):
PyMOL image
show in jmol