Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A500:A307
Extra
PDB:
ATOM 1 O3' G A 499 -30.770-111.492 36.446 1.00 0.01 O
ATOM 2 P A A 500 -30.972-113.045 36.697 1.00 0.01 P
ATOM 3 OP1 A A 500 -31.278-113.223 38.117 1.00 0.01 O
ATOM 4 OP2 A A 500 -29.799-113.727 36.129 1.00 0.01 O
ATOM 5 O5' A A 500 -32.244-113.357 35.832 1.00 0.01 O
ATOM 6 C5' A A 500 -32.549-114.673 35.446 1.00 0.01 C
ATOM 7 C4' A A 500 -33.929-114.753 34.864 1.00 0.01 C
ATOM 8 O4' A A 500 -34.889-114.347 35.850 1.00 0.01 O
ATOM 9 C3' A A 500 -34.202-113.855 33.678 1.00 0.01 C
ATOM 10 O3' A A 500 -33.787-114.439 32.467 1.00 0.01 O
ATOM 11 C2' A A 500 -35.692-113.671 33.755 1.00 0.01 C
ATOM 12 O2' A A 500 -36.353-114.825 33.257 1.00 0.01 O
ATOM 13 C1' A A 500 -35.906-113.618 35.251 1.00 0.01 C
ATOM 14 N9 A A 500 -35.855-112.263 35.796 1.00 0.01 N
ATOM 15 C8 A A 500 -34.929-111.804 36.682 1.00 0.01 C
ATOM 16 N7 A A 500 -35.138-110.587 37.094 1.00 0.01 N
ATOM 17 C5 A A 500 -36.302-110.236 36.443 1.00 0.01 C
ATOM 18 C6 A A 500 -37.036-109.065 36.472 1.00 0.01 C
ATOM 19 N6 A A 500 -36.734-107.970 37.171 1.00 0.01 N
ATOM 20 N1 A A 500 -38.115-109.053 35.724 1.00 0.01 N
ATOM 21 C2 A A 500 -38.423-110.133 35.012 1.00 0.01 C
ATOM 22 N3 A A 500 -37.841-111.307 34.895 1.00 0.01 N
ATOM 23 C4 A A 500 -36.760-111.266 35.660 1.00 0.01 C
ATOM 24 P A A 501 -33.041-113.558 31.373 1.00 0.05 P
ATOM 25 OP1 A A 501 -32.585-114.467 30.304 1.00 0.05 O
ATOM 26 OP2 A A 501 -32.035-112.768 32.085 1.00 0.05 O
ATOM 27 O5' A A 501 -34.220-112.630 30.835 1.00 0.05 O
TER
ATOM 1 O3' G B 306 -38.148-118.536 38.266 1.00 0.30 O
ATOM 2 P G B 307 -36.705-118.819 37.598 1.00 0.01 P
ATOM 3 OP1 G B 307 -36.807-118.432 36.182 1.00 0.01 O
ATOM 4 OP2 G B 307 -36.327-120.194 37.924 1.00 0.01 O
ATOM 5 O5' G B 307 -35.770-117.799 38.371 1.00 0.01 O
ATOM 6 C5' G B 307 -34.440-118.128 38.695 1.00 0.01 C
ATOM 7 C4' G B 307 -33.713-116.936 39.254 1.00 0.01 C
ATOM 8 O4' G B 307 -33.958-115.808 38.412 1.00 0.01 O
ATOM 9 C3' G B 307 -34.146-116.488 40.643 1.00 0.01 C
ATOM 10 O3' G B 307 -33.411-117.120 41.646 1.00 0.01 O
ATOM 11 C2' G B 307 -33.903-115.012 40.628 1.00 0.01 C
ATOM 12 O2' G B 307 -32.541-114.749 40.903 1.00 0.01 O
ATOM 13 C1' G B 307 -34.170-114.667 39.180 1.00 0.01 C
ATOM 14 N9 G B 307 -35.542-114.186 38.932 1.00 0.04 N
ATOM 15 C8 G B 307 -36.469-114.799 38.132 1.00 0.04 C
ATOM 16 N7 G B 307 -37.571-114.121 37.997 1.00 0.04 N
ATOM 17 C5 G B 307 -37.347-112.979 38.735 1.00 0.04 C
ATOM 18 C6 G B 307 -38.204-111.872 38.945 1.00 0.04 C
ATOM 19 O6 G B 307 -39.360-111.696 38.522 1.00 0.04 O
ATOM 20 N1 G B 307 -37.579-110.916 39.751 1.00 0.04 N
ATOM 21 C2 G B 307 -36.312-111.037 40.274 1.00 0.04 C
ATOM 22 N2 G B 307 -35.916-110.016 41.019 1.00 0.04 N
ATOM 23 N3 G B 307 -35.510-112.058 40.098 1.00 0.04 N
ATOM 24 C4 G B 307 -36.092-112.987 39.313 1.00 0.04 C
ATOM 25 P A B 308 -34.144-117.968 42.742 1.00 0.01 P
ATOM 26 OP1 A B 308 -33.247-119.068 43.105 1.00 0.01 O
ATOM 27 OP2 A B 308 -35.490-118.282 42.206 1.00 0.01 O
ATOM 28 O5' A B 308 -34.262-116.946 43.939 1.00 0.01 O
TER
ATOM 2 P A A 500 -30.972-113.045 36.697 1.00 0.01 P
ATOM 3 OP1 A A 500 -31.278-113.223 38.117 1.00 0.01 O
ATOM 4 OP2 A A 500 -29.799-113.727 36.129 1.00 0.01 O
ATOM 5 O5' A A 500 -32.244-113.357 35.832 1.00 0.01 O
ATOM 6 C5' A A 500 -32.549-114.673 35.446 1.00 0.01 C
ATOM 7 C4' A A 500 -33.929-114.753 34.864 1.00 0.01 C
ATOM 8 O4' A A 500 -34.889-114.347 35.850 1.00 0.01 O
ATOM 9 C3' A A 500 -34.202-113.855 33.678 1.00 0.01 C
ATOM 10 O3' A A 500 -33.787-114.439 32.467 1.00 0.01 O
ATOM 11 C2' A A 500 -35.692-113.671 33.755 1.00 0.01 C
ATOM 12 O2' A A 500 -36.353-114.825 33.257 1.00 0.01 O
ATOM 13 C1' A A 500 -35.906-113.618 35.251 1.00 0.01 C
ATOM 14 N9 A A 500 -35.855-112.263 35.796 1.00 0.01 N
ATOM 15 C8 A A 500 -34.929-111.804 36.682 1.00 0.01 C
ATOM 16 N7 A A 500 -35.138-110.587 37.094 1.00 0.01 N
ATOM 17 C5 A A 500 -36.302-110.236 36.443 1.00 0.01 C
ATOM 18 C6 A A 500 -37.036-109.065 36.472 1.00 0.01 C
ATOM 19 N6 A A 500 -36.734-107.970 37.171 1.00 0.01 N
ATOM 20 N1 A A 500 -38.115-109.053 35.724 1.00 0.01 N
ATOM 21 C2 A A 500 -38.423-110.133 35.012 1.00 0.01 C
ATOM 22 N3 A A 500 -37.841-111.307 34.895 1.00 0.01 N
ATOM 23 C4 A A 500 -36.760-111.266 35.660 1.00 0.01 C
ATOM 24 P A A 501 -33.041-113.558 31.373 1.00 0.05 P
ATOM 25 OP1 A A 501 -32.585-114.467 30.304 1.00 0.05 O
ATOM 26 OP2 A A 501 -32.035-112.768 32.085 1.00 0.05 O
ATOM 27 O5' A A 501 -34.220-112.630 30.835 1.00 0.05 O
TER
ATOM 1 O3' G B 306 -38.148-118.536 38.266 1.00 0.30 O
ATOM 2 P G B 307 -36.705-118.819 37.598 1.00 0.01 P
ATOM 3 OP1 G B 307 -36.807-118.432 36.182 1.00 0.01 O
ATOM 4 OP2 G B 307 -36.327-120.194 37.924 1.00 0.01 O
ATOM 5 O5' G B 307 -35.770-117.799 38.371 1.00 0.01 O
ATOM 6 C5' G B 307 -34.440-118.128 38.695 1.00 0.01 C
ATOM 7 C4' G B 307 -33.713-116.936 39.254 1.00 0.01 C
ATOM 8 O4' G B 307 -33.958-115.808 38.412 1.00 0.01 O
ATOM 9 C3' G B 307 -34.146-116.488 40.643 1.00 0.01 C
ATOM 10 O3' G B 307 -33.411-117.120 41.646 1.00 0.01 O
ATOM 11 C2' G B 307 -33.903-115.012 40.628 1.00 0.01 C
ATOM 12 O2' G B 307 -32.541-114.749 40.903 1.00 0.01 O
ATOM 13 C1' G B 307 -34.170-114.667 39.180 1.00 0.01 C
ATOM 14 N9 G B 307 -35.542-114.186 38.932 1.00 0.04 N
ATOM 15 C8 G B 307 -36.469-114.799 38.132 1.00 0.04 C
ATOM 16 N7 G B 307 -37.571-114.121 37.997 1.00 0.04 N
ATOM 17 C5 G B 307 -37.347-112.979 38.735 1.00 0.04 C
ATOM 18 C6 G B 307 -38.204-111.872 38.945 1.00 0.04 C
ATOM 19 O6 G B 307 -39.360-111.696 38.522 1.00 0.04 O
ATOM 20 N1 G B 307 -37.579-110.916 39.751 1.00 0.04 N
ATOM 21 C2 G B 307 -36.312-111.037 40.274 1.00 0.04 C
ATOM 22 N2 G B 307 -35.916-110.016 41.019 1.00 0.04 N
ATOM 23 N3 G B 307 -35.510-112.058 40.098 1.00 0.04 N
ATOM 24 C4 G B 307 -36.092-112.987 39.313 1.00 0.04 C
ATOM 25 P A B 308 -34.144-117.968 42.742 1.00 0.01 P
ATOM 26 OP1 A B 308 -33.247-119.068 43.105 1.00 0.01 O
ATOM 27 OP2 A B 308 -35.490-118.282 42.206 1.00 0.01 O
ATOM 28 O5' A B 308 -34.262-116.946 43.939 1.00 0.01 O
TER
Atoms:
OP1: (-31.278,-113.223,38.117)
OP2: (-29.799,-113.727,36.129)
C3': (-34.202,-113.855,33.678)
C1': (-35.906,-113.618,35.251)
C5': (-32.549,-114.673,35.446)
O4': (-34.889,-114.347,35.850)
C8: (-34.929,-111.804,36.682)
O2': (-36.353,-114.825,33.257)
C6: (-37.036,-109.065,36.472)
C5: (-36.302,-110.236,36.443)
C4: (-36.760,-111.266,35.660)
P: (-30.972,-113.045,36.697)
C4': (-33.929,-114.753,34.864)
C2': (-35.692,-113.671,33.755)
C2: (-38.423,-110.133,35.012)
N1: (-38.115,-109.053,35.724)
N3: (-37.841,-111.307,34.895)
N6: (-36.734,-107.970,37.171)
N7: (-35.138,-110.587,37.094)
N9: (-35.855,-112.263,35.796)
O5': (-32.244,-113.357,35.832)
O3': (-33.787,-114.439,32.467)
OP2: (-29.799,-113.727,36.129)
C3': (-34.202,-113.855,33.678)
C1': (-35.906,-113.618,35.251)
C5': (-32.549,-114.673,35.446)
O4': (-34.889,-114.347,35.850)
C8: (-34.929,-111.804,36.682)
O2': (-36.353,-114.825,33.257)
C6: (-37.036,-109.065,36.472)
C5: (-36.302,-110.236,36.443)
C4: (-36.760,-111.266,35.660)
P: (-30.972,-113.045,36.697)
C4': (-33.929,-114.753,34.864)
C2': (-35.692,-113.671,33.755)
C2: (-38.423,-110.133,35.012)
N1: (-38.115,-109.053,35.724)
N3: (-37.841,-111.307,34.895)
N6: (-36.734,-107.970,37.171)
N7: (-35.138,-110.587,37.094)
N9: (-35.855,-112.263,35.796)
O5': (-32.244,-113.357,35.832)
O3': (-33.787,-114.439,32.467)
OP1: (-36.807,-118.432,36.182)
OP2: (-36.327,-120.194,37.924)
C3': (-34.146,-116.488,40.643)
C1': (-34.170,-114.667,39.180)
C5': (-34.440,-118.128,38.695)
O6: (-39.360,-111.696,38.522)
O4': (-33.958,-115.808,38.412)
C8: (-36.469,-114.799,38.132)
C2: (-36.312,-111.037,40.274)
C6: (-38.204,-111.872,38.945)
C5: (-37.347,-112.979,38.735)
C4: (-36.092,-112.987,39.313)
P: (-36.705,-118.819,37.598)
C4': (-33.713,-116.936,39.254)
C2': (-33.903,-115.012,40.628)
O2': (-32.541,-114.749,40.903)
N1: (-37.579,-110.916,39.751)
N2: (-35.916,-110.016,41.019)
N3: (-35.510,-112.058,40.098)
N7: (-37.571,-114.121,37.997)
N9: (-35.542,-114.186,38.932)
O5': (-35.770,-117.799,38.371)
O3': (-33.411,-117.120,41.646)
OP2: (-36.327,-120.194,37.924)
C3': (-34.146,-116.488,40.643)
C1': (-34.170,-114.667,39.180)
C5': (-34.440,-118.128,38.695)
O6: (-39.360,-111.696,38.522)
O4': (-33.958,-115.808,38.412)
C8: (-36.469,-114.799,38.132)
C2: (-36.312,-111.037,40.274)
C6: (-38.204,-111.872,38.945)
C5: (-37.347,-112.979,38.735)
C4: (-36.092,-112.987,39.313)
P: (-36.705,-118.819,37.598)
C4': (-33.713,-116.936,39.254)
C2': (-33.903,-115.012,40.628)
O2': (-32.541,-114.749,40.903)
N1: (-37.579,-110.916,39.751)
N2: (-35.916,-110.016,41.019)
N3: (-35.510,-112.058,40.098)
N7: (-37.571,-114.121,37.997)
N9: (-35.542,-114.186,38.932)
O5': (-35.770,-117.799,38.371)
O3': (-33.411,-117.120,41.646)
Image (generated by PyMOL):