Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZDH:R12:R1
Extra
PDB:
ATOM 1 O3' C A 11 18.941 88.208 28.693 0.60 72.22 O
ATOM 2 P A A 12 17.801 87.185 29.235 0.60 71.90 P
ATOM 3 OP1 A A 12 17.935 85.896 28.461 0.60 72.84 O
ATOM 4 OP2 A A 12 16.477 87.927 29.231 0.60 72.55 O
ATOM 5 O5' A A 12 18.170 86.908 30.752 0.00 67.85 O
ATOM 6 C5' A A 12 19.472 86.457 31.123 0.00 62.43 C
ATOM 7 C4' A A 12 19.833 87.031 32.461 0.00 59.50 C
ATOM 8 O4' A A 12 19.810 88.480 32.369 0.00 58.64 O
ATOM 9 C3' A A 12 18.841 86.723 33.570 0.00 57.80 C
ATOM 10 O3' A A 12 18.775 85.370 34.040 0.00 57.13 O
ATOM 11 C2' A A 12 19.054 87.867 34.549 0.00 57.19 C
ATOM 12 O2' A A 12 20.166 87.649 35.392 0.00 56.04 O
ATOM 13 C1' A A 12 19.374 89.026 33.599 0.00 57.60 C
ATOM 14 N9 A A 12 18.237 89.917 33.351 0.60 57.73 N
ATOM 15 C8 A A 12 17.418 90.033 32.239 0.60 57.74 C
ATOM 16 N7 A A 12 16.470 90.948 32.371 0.60 57.04 N
ATOM 17 C5 A A 12 16.681 91.465 33.648 0.60 57.10 C
ATOM 18 C6 A A 12 16.001 92.457 34.405 0.60 56.34 C
ATOM 19 N6 A A 12 14.933 93.132 33.969 0.60 55.76 N
ATOM 20 N1 A A 12 16.473 92.737 35.646 0.60 56.82 N
ATOM 21 C2 A A 12 17.547 92.058 36.097 0.60 57.02 C
ATOM 22 N3 A A 12 18.261 91.101 35.491 0.60 57.23 N
ATOM 23 C4 A A 12 17.769 90.846 34.262 0.60 57.26 C
TER
ATOM 1 O3' U B 0 17.786 98.116 42.442 0.60 81.31 O
ATOM 2 P G B 1 18.777 99.167 41.702 0.60 80.84 P
ATOM 3 OP1 G B 1 19.591 99.845 42.796 0.60 80.74 O
ATOM 4 OP2 G B 1 17.984 100.040 40.724 0.60 79.11 O
ATOM 5 O5' G B 1 19.779 98.235 40.861 0.60 76.92 O
ATOM 6 C5' G B 1 20.777 97.431 41.539 0.60 71.42 C
ATOM 7 C4' G B 1 21.492 96.509 40.566 0.60 66.93 C
ATOM 8 O4' G B 1 20.569 95.511 40.039 0.60 65.11 O
ATOM 9 C3' G B 1 22.096 97.166 39.333 0.60 65.53 C
ATOM 10 O3' G B 1 23.361 97.769 39.618 0.60 63.34 O
ATOM 11 C2' G B 1 22.201 95.986 38.363 0.60 64.02 C
ATOM 12 O2' G B 1 23.338 95.175 38.625 0.60 64.87 O
ATOM 13 C1' G B 1 20.939 95.181 38.703 0.60 62.55 C
ATOM 14 N9 G B 1 19.817 95.489 37.815 0.60 59.01 N
ATOM 15 C8 G B 1 18.827 96.429 38.015 0.60 57.62 C
ATOM 16 N7 G B 1 17.974 96.495 37.024 0.60 56.52 N
ATOM 17 C5 G B 1 18.420 95.537 36.116 0.60 55.47 C
ATOM 18 C6 G B 1 17.899 95.155 34.825 0.60 54.42 C
ATOM 19 O6 G B 1 16.894 95.594 34.233 0.60 54.14 O
ATOM 20 N1 G B 1 18.673 94.157 34.230 0.60 52.91 N
ATOM 21 C2 G B 1 19.799 93.593 34.792 0.60 53.78 C
ATOM 22 N2 G B 1 20.425 92.651 34.051 0.60 53.82 N
ATOM 23 N3 G B 1 20.285 93.930 35.994 0.60 54.88 N
ATOM 24 C4 G B 1 19.554 94.903 36.588 0.60 56.39 C
ATOM 25 P A B 2 23.418 99.335 40.024 0.60 61.16 P
ATOM 26 OP1 A B 2 23.278 99.450 41.523 0.60 59.89 O
ATOM 27 OP2 A B 2 22.446 100.083 39.129 0.60 61.36 O
ATOM 28 O5' A B 2 24.911 99.795 39.696 0.60 59.52 O
TER
ATOM 2 P A A 12 17.801 87.185 29.235 0.60 71.90 P
ATOM 3 OP1 A A 12 17.935 85.896 28.461 0.60 72.84 O
ATOM 4 OP2 A A 12 16.477 87.927 29.231 0.60 72.55 O
ATOM 5 O5' A A 12 18.170 86.908 30.752 0.00 67.85 O
ATOM 6 C5' A A 12 19.472 86.457 31.123 0.00 62.43 C
ATOM 7 C4' A A 12 19.833 87.031 32.461 0.00 59.50 C
ATOM 8 O4' A A 12 19.810 88.480 32.369 0.00 58.64 O
ATOM 9 C3' A A 12 18.841 86.723 33.570 0.00 57.80 C
ATOM 10 O3' A A 12 18.775 85.370 34.040 0.00 57.13 O
ATOM 11 C2' A A 12 19.054 87.867 34.549 0.00 57.19 C
ATOM 12 O2' A A 12 20.166 87.649 35.392 0.00 56.04 O
ATOM 13 C1' A A 12 19.374 89.026 33.599 0.00 57.60 C
ATOM 14 N9 A A 12 18.237 89.917 33.351 0.60 57.73 N
ATOM 15 C8 A A 12 17.418 90.033 32.239 0.60 57.74 C
ATOM 16 N7 A A 12 16.470 90.948 32.371 0.60 57.04 N
ATOM 17 C5 A A 12 16.681 91.465 33.648 0.60 57.10 C
ATOM 18 C6 A A 12 16.001 92.457 34.405 0.60 56.34 C
ATOM 19 N6 A A 12 14.933 93.132 33.969 0.60 55.76 N
ATOM 20 N1 A A 12 16.473 92.737 35.646 0.60 56.82 N
ATOM 21 C2 A A 12 17.547 92.058 36.097 0.60 57.02 C
ATOM 22 N3 A A 12 18.261 91.101 35.491 0.60 57.23 N
ATOM 23 C4 A A 12 17.769 90.846 34.262 0.60 57.26 C
TER
ATOM 1 O3' U B 0 17.786 98.116 42.442 0.60 81.31 O
ATOM 2 P G B 1 18.777 99.167 41.702 0.60 80.84 P
ATOM 3 OP1 G B 1 19.591 99.845 42.796 0.60 80.74 O
ATOM 4 OP2 G B 1 17.984 100.040 40.724 0.60 79.11 O
ATOM 5 O5' G B 1 19.779 98.235 40.861 0.60 76.92 O
ATOM 6 C5' G B 1 20.777 97.431 41.539 0.60 71.42 C
ATOM 7 C4' G B 1 21.492 96.509 40.566 0.60 66.93 C
ATOM 8 O4' G B 1 20.569 95.511 40.039 0.60 65.11 O
ATOM 9 C3' G B 1 22.096 97.166 39.333 0.60 65.53 C
ATOM 10 O3' G B 1 23.361 97.769 39.618 0.60 63.34 O
ATOM 11 C2' G B 1 22.201 95.986 38.363 0.60 64.02 C
ATOM 12 O2' G B 1 23.338 95.175 38.625 0.60 64.87 O
ATOM 13 C1' G B 1 20.939 95.181 38.703 0.60 62.55 C
ATOM 14 N9 G B 1 19.817 95.489 37.815 0.60 59.01 N
ATOM 15 C8 G B 1 18.827 96.429 38.015 0.60 57.62 C
ATOM 16 N7 G B 1 17.974 96.495 37.024 0.60 56.52 N
ATOM 17 C5 G B 1 18.420 95.537 36.116 0.60 55.47 C
ATOM 18 C6 G B 1 17.899 95.155 34.825 0.60 54.42 C
ATOM 19 O6 G B 1 16.894 95.594 34.233 0.60 54.14 O
ATOM 20 N1 G B 1 18.673 94.157 34.230 0.60 52.91 N
ATOM 21 C2 G B 1 19.799 93.593 34.792 0.60 53.78 C
ATOM 22 N2 G B 1 20.425 92.651 34.051 0.60 53.82 N
ATOM 23 N3 G B 1 20.285 93.930 35.994 0.60 54.88 N
ATOM 24 C4 G B 1 19.554 94.903 36.588 0.60 56.39 C
ATOM 25 P A B 2 23.418 99.335 40.024 0.60 61.16 P
ATOM 26 OP1 A B 2 23.278 99.450 41.523 0.60 59.89 O
ATOM 27 OP2 A B 2 22.446 100.083 39.129 0.60 61.36 O
ATOM 28 O5' A B 2 24.911 99.795 39.696 0.60 59.52 O
TER
Atoms:
OP1: (17.935,85.896,28.461)
OP2: (16.477,87.927,29.231)
C3': (18.841,86.723,33.570)
C1': (19.374,89.026,33.599)
C5': (19.472,86.457,31.123)
O4': (19.810,88.480,32.369)
C8: (17.418,90.033,32.239)
O2': (20.166,87.649,35.392)
C6: (16.001,92.457,34.405)
C5: (16.681,91.465,33.648)
C4: (17.769,90.846,34.262)
P: (17.801,87.185,29.235)
C4': (19.833,87.031,32.461)
C2': (19.054,87.867,34.549)
C2: (17.547,92.058,36.097)
N1: (16.473,92.737,35.646)
N3: (18.261,91.101,35.491)
N6: (14.933,93.132,33.969)
N7: (16.470,90.948,32.371)
N9: (18.237,89.917,33.351)
O5': (18.170,86.908,30.752)
O3': (18.775,85.370,34.040)
OP2: (16.477,87.927,29.231)
C3': (18.841,86.723,33.570)
C1': (19.374,89.026,33.599)
C5': (19.472,86.457,31.123)
O4': (19.810,88.480,32.369)
C8: (17.418,90.033,32.239)
O2': (20.166,87.649,35.392)
C6: (16.001,92.457,34.405)
C5: (16.681,91.465,33.648)
C4: (17.769,90.846,34.262)
P: (17.801,87.185,29.235)
C4': (19.833,87.031,32.461)
C2': (19.054,87.867,34.549)
C2: (17.547,92.058,36.097)
N1: (16.473,92.737,35.646)
N3: (18.261,91.101,35.491)
N6: (14.933,93.132,33.969)
N7: (16.470,90.948,32.371)
N9: (18.237,89.917,33.351)
O5': (18.170,86.908,30.752)
O3': (18.775,85.370,34.040)
OP1: (19.591,99.845,42.796)
OP2: (17.984,100.040,40.724)
C3': (22.096,97.166,39.333)
C1': (20.939,95.181,38.703)
C5': (20.777,97.431,41.539)
O6: (16.894,95.594,34.233)
O4': (20.569,95.511,40.039)
C8: (18.827,96.429,38.015)
C2: (19.799,93.593,34.792)
C6: (17.899,95.155,34.825)
C5: (18.420,95.537,36.116)
C4: (19.554,94.903,36.588)
P: (18.777,99.167,41.702)
C4': (21.492,96.509,40.566)
C2': (22.201,95.986,38.363)
O2': (23.338,95.175,38.625)
N1: (18.673,94.157,34.230)
N2: (20.425,92.651,34.051)
N3: (20.285,93.930,35.994)
N7: (17.974,96.495,37.024)
N9: (19.817,95.489,37.815)
O5': (19.779,98.235,40.861)
O3': (23.361,97.769,39.618)
OP2: (17.984,100.040,40.724)
C3': (22.096,97.166,39.333)
C1': (20.939,95.181,38.703)
C5': (20.777,97.431,41.539)
O6: (16.894,95.594,34.233)
O4': (20.569,95.511,40.039)
C8: (18.827,96.429,38.015)
C2: (19.799,93.593,34.792)
C6: (17.899,95.155,34.825)
C5: (18.420,95.537,36.116)
C4: (19.554,94.903,36.588)
P: (18.777,99.167,41.702)
C4': (21.492,96.509,40.566)
C2': (22.201,95.986,38.363)
O2': (23.338,95.175,38.625)
N1: (18.673,94.157,34.230)
N2: (20.425,92.651,34.051)
N3: (20.285,93.930,35.994)
N7: (17.974,96.495,37.024)
N9: (19.817,95.489,37.815)
O5': (19.779,98.235,40.861)
O3': (23.361,97.769,39.618)
Image (generated by PyMOL):