ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CME:0236:0254

Extra

PDB:
ATOM 1 O3' A A 235 90.683 122.809 -8.839 1.00 59.13 O
ATOM 2 P A A 236 90.235 123.685 -10.097 1.00 60.22 P
ATOM 3 OP1 A A 236 91.307 123.575 -11.115 1.00 61.95 O
ATOM 4 OP2 A A 236 89.826 125.023 -9.597 1.00 60.01 O
ATOM 5 O5' A A 236 88.947 122.933 -10.652 1.00 59.52 O
ATOM 6 C5' A A 236 87.758 122.809 -9.855 1.00 58.81 C
ATOM 7 C4' A A 236 86.957 121.617 -10.310 1.00 60.15 C
ATOM 8 O4' A A 236 87.818 120.460 -10.320 1.00 60.65 O
ATOM 9 C3' A A 236 85.835 121.205 -9.377 1.00 60.97 C
ATOM 10 O3' A A 236 84.651 121.960 -9.641 1.00 62.29 O
ATOM 11 C2' A A 236 85.625 119.732 -9.732 1.00 61.94 C
ATOM 12 O2' A A 236 84.732 119.542 -10.806 1.00 62.93 O
ATOM 13 C1' A A 236 87.031 119.298 -10.167 1.00 62.83 C
ATOM 14 N9 A A 236 87.738 118.382 -9.276 1.00 66.26 N
ATOM 15 C8 A A 236 88.216 117.129 -9.578 1.00 67.52 C
ATOM 16 N7 A A 236 88.842 116.550 -8.584 1.00 68.92 N
ATOM 17 C5 A A 236 88.764 117.480 -7.554 1.00 69.92 C
ATOM 18 C6 A A 236 89.237 117.471 -6.227 1.00 71.12 C
ATOM 19 N6 A A 236 89.916 116.451 -5.683 1.00 71.55 N
ATOM 20 N1 A A 236 88.984 118.560 -5.465 1.00 71.24 N
ATOM 21 C2 A A 236 88.305 119.578 -6.006 1.00 69.74 C
ATOM 22 N3 A A 236 87.814 119.703 -7.231 1.00 68.98 N
ATOM 23 C4 A A 236 88.081 118.609 -7.965 1.00 68.38 C
ATOM 24 P G A 237 84.398 123.352 -8.877 1.00 64.19 P
ATOM 25 OP1 G A 237 82.954 123.678 -8.994 1.00 61.88 O
ATOM 26 OP2 G A 237 85.416 124.329 -9.349 1.00 63.07 O
ATOM 27 O5' G A 237 84.700 123.031 -7.345 1.00 64.32 O
TER

ATOM 1 O3' U B 253 85.217 121.204 1.571 1.00 55.75 O
ATOM 2 P G B 254 84.106 120.066 1.718 1.00 58.70 P
ATOM 3 OP1 G B 254 82.851 120.720 2.174 1.00 58.81 O
ATOM 4 OP2 G B 254 84.708 118.976 2.526 1.00 58.89 O
ATOM 5 O5' G B 254 83.904 119.533 0.231 1.00 59.53 O
ATOM 6 C5' G B 254 83.262 120.357 -0.753 1.00 61.66 C
ATOM 7 C4' G B 254 83.482 119.808 -2.143 1.00 62.76 C
ATOM 8 O4' G B 254 84.901 119.766 -2.437 1.00 62.06 O
ATOM 9 C3' G B 254 83.001 118.391 -2.418 1.00 63.04 C
ATOM 10 O3' G B 254 81.601 118.379 -2.702 1.00 64.02 O
ATOM 11 C2' G B 254 83.823 118.020 -3.646 1.00 62.76 C
ATOM 12 O2' G B 254 83.296 118.571 -4.839 1.00 63.62 O
ATOM 13 C1' G B 254 85.160 118.701 -3.334 1.00 62.24 C
ATOM 14 N9 G B 254 86.143 117.809 -2.732 1.00 61.50 N
ATOM 15 C8 G B 254 86.737 117.924 -1.500 1.00 61.92 C
ATOM 16 N7 G B 254 87.581 116.963 -1.249 1.00 61.95 N
ATOM 17 C5 G B 254 87.539 116.166 -2.382 1.00 62.32 C
ATOM 18 C6 G B 254 88.235 114.968 -2.692 1.00 63.49 C
ATOM 19 O6 G B 254 89.050 114.344 -1.999 1.00 63.31 O
ATOM 20 N1 G B 254 87.895 114.495 -3.957 1.00 64.67 N
ATOM 21 C2 G B 254 86.998 115.091 -4.810 1.00 63.54 C
ATOM 22 N2 G B 254 86.806 114.484 -5.987 1.00 63.46 N
ATOM 23 N3 G B 254 86.340 116.200 -4.529 1.00 62.77 N
ATOM 24 C4 G B 254 86.658 116.679 -3.307 1.00 61.87 C
ATOM 25 P G B 255 80.743 117.038 -2.472 1.00 65.08 P
ATOM 26 OP1 G B 255 79.330 117.383 -2.798 1.00 62.63 O
ATOM 27 OP2 G B 255 81.072 116.473 -1.140 1.00 65.92 O
ATOM 28 O5' G B 255 81.304 116.022 -3.564 1.00 64.91 O
TER

Atoms:
OP1: (91.307,123.575,-11.115)
OP2: (89.826,125.023,-9.597)
C3': (85.835,121.205,-9.377)
C1': (87.031,119.298,-10.167)
C5': (87.758,122.809,-9.855)
O4': (87.818,120.460,-10.320)
C8: (88.216,117.129,-9.578)
O2': (84.732,119.542,-10.806)
C6: (89.237,117.471,-6.227)
C5: (88.764,117.480,-7.554)
C4: (88.081,118.609,-7.965)
P: (90.235,123.685,-10.097)
C4': (86.957,121.617,-10.310)
C2': (85.625,119.732,-9.732)
C2: (88.305,119.578,-6.006)
N1: (88.984,118.560,-5.465)
N3: (87.814,119.703,-7.231)
N6: (89.916,116.451,-5.683)
N7: (88.842,116.550,-8.584)
N9: (87.738,118.382,-9.276)
O5': (88.947,122.933,-10.652)
O3': (84.651,121.960,-9.641)
OP1: (82.851,120.720,2.174)
OP2: (84.708,118.976,2.526)
C3': (83.001,118.391,-2.418)
C1': (85.160,118.701,-3.334)
C5': (83.262,120.357,-0.753)
O6: (89.050,114.344,-1.999)
O4': (84.901,119.766,-2.437)
C8: (86.737,117.924,-1.500)
C2: (86.998,115.091,-4.810)
C6: (88.235,114.968,-2.692)
C5: (87.539,116.166,-2.382)
C4: (86.658,116.679,-3.307)
P: (84.106,120.066,1.718)
C4': (83.482,119.808,-2.143)
C2': (83.823,118.020,-3.646)
O2': (83.296,118.571,-4.839)
N1: (87.895,114.495,-3.957)
N2: (86.806,114.484,-5.987)
N3: (86.340,116.200,-4.529)
N7: (87.581,116.963,-1.249)
N9: (86.143,117.809,-2.732)
O5': (83.904,119.533,0.231)
O3': (81.601,118.379,-2.702)
Image (generated by PyMOL):
PyMOL image
show in jmol