Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1920:A1832
Extra
PDB:
ATOM 1 O3' U A1919 -94.819 -11.311 18.740 1.00 85.68 O
ATOM 2 P A A1920 -95.141 -9.786 19.091 1.00 19.33 P
ATOM 3 OP1 A A1920 -95.899 -9.774 20.377 1.00 19.33 O
ATOM 4 OP2 A A1920 -95.773 -9.191 17.876 1.00 19.33 O
ATOM 5 O5' A A1920 -93.693 -9.170 19.308 1.00 19.33 O
ATOM 6 C5' A A1920 -93.509 -7.767 19.417 1.00 19.33 C
ATOM 7 C4' A A1920 -92.318 -7.312 18.620 1.00 19.33 C
ATOM 8 O4' A A1920 -91.248 -8.274 18.768 1.00 19.33 O
ATOM 9 C3' A A1920 -92.521 -7.196 17.122 1.00 19.33 C
ATOM 10 O3' A A1920 -93.137 -5.964 16.763 1.00 19.33 O
ATOM 11 C2' A A1920 -91.098 -7.357 16.582 1.00 19.33 C
ATOM 12 O2' A A1920 -90.394 -6.117 16.619 1.00 19.33 O
ATOM 13 C1' A A1920 -90.463 -8.312 17.610 1.00 19.33 C
ATOM 14 N9 A A1920 -90.405 -9.708 17.148 1.00 19.12 N
ATOM 15 C8 A A1920 -91.333 -10.642 17.464 1.00 19.12 C
ATOM 16 N7 A A1920 -91.085 -11.821 16.962 1.00 19.12 N
ATOM 17 C5 A A1920 -89.894 -11.662 16.285 1.00 19.12 C
ATOM 18 C6 A A1920 -89.130 -12.574 15.525 1.00 19.12 C
ATOM 19 N6 A A1920 -89.457 -13.857 15.347 1.00 19.12 N
ATOM 20 N1 A A1920 -87.998 -12.114 14.969 1.00 19.12 N
ATOM 21 C2 A A1920 -87.703 -10.818 15.182 1.00 19.12 C
ATOM 22 N3 A A1920 -88.356 -9.870 15.872 1.00 19.12 N
ATOM 23 C4 A A1920 -89.460 -10.362 16.411 1.00 19.12 C
ATOM 24 P A A1921 -93.897 -5.791 15.356 1.00 6.80 P
ATOM 25 OP1 A A1921 -94.452 -4.431 15.324 1.00 6.80 O
ATOM 26 OP2 A A1921 -94.823 -6.930 15.209 1.00 6.80 O
ATOM 27 O5' A A1921 -92.714 -5.913 14.296 1.00 6.80 O
TER
ATOM 1 O3' C B1831 -87.607 -6.097 22.809 1.00 11.38 O
ATOM 2 P G B1832 -88.944 -5.585 23.516 1.00 7.12 P
ATOM 3 OP1 G B1832 -89.295 -4.301 22.899 1.00 7.12 O
ATOM 4 OP2 G B1832 -88.685 -5.636 25.011 1.00 7.12 O
ATOM 5 O5' G B1832 -90.016 -6.696 23.084 1.00 7.12 O
ATOM 6 C5' G B1832 -90.346 -7.764 23.958 1.00 7.12 C
ATOM 7 C4' G B1832 -91.263 -8.762 23.307 1.00 7.12 C
ATOM 8 O4' G B1832 -91.175 -8.646 21.872 1.00 7.12 O
ATOM 9 C3' G B1832 -90.925 -10.209 23.552 1.00 7.12 C
ATOM 10 O3' G B1832 -91.326 -10.666 24.807 1.00 7.12 O
ATOM 11 C2' G B1832 -91.576 -10.917 22.379 1.00 7.12 C
ATOM 12 O2' G B1832 -92.972 -11.004 22.543 1.00 7.12 O
ATOM 13 C1' G B1832 -91.293 -9.929 21.273 1.00 7.12 C
ATOM 14 N9 G B1832 -90.036 -10.233 20.587 1.00 6.36 N
ATOM 15 C8 G B1832 -89.036 -9.334 20.384 1.00 6.36 C
ATOM 16 N7 G B1832 -88.019 -9.833 19.749 1.00 6.36 N
ATOM 17 C5 G B1832 -88.368 -11.151 19.523 1.00 6.36 C
ATOM 18 C6 G B1832 -87.639 -12.191 18.878 1.00 6.36 C
ATOM 19 O6 G B1832 -86.502 -12.150 18.351 1.00 6.36 O
ATOM 20 N1 G B1832 -88.352 -13.386 18.884 1.00 6.36 N
ATOM 21 C2 G B1832 -89.586 -13.542 19.428 1.00 6.36 C
ATOM 22 N2 G B1832 -90.088 -14.758 19.294 1.00 6.36 N
ATOM 23 N3 G B1832 -90.282 -12.595 20.037 1.00 6.36 N
ATOM 24 C4 G B1832 -89.612 -11.420 20.051 1.00 6.36 C
ATOM 25 P G B1833 -90.195 -11.124 25.837 1.00 12.06 P
ATOM 26 OP1 G B1833 -90.841 -11.256 27.177 1.00 12.06 O
ATOM 27 OP2 G B1833 -89.063 -10.186 25.684 1.00 12.06 O
ATOM 28 O5' G B1833 -89.796 -12.562 25.275 1.00 12.06 O
TER
ATOM 2 P A A1920 -95.141 -9.786 19.091 1.00 19.33 P
ATOM 3 OP1 A A1920 -95.899 -9.774 20.377 1.00 19.33 O
ATOM 4 OP2 A A1920 -95.773 -9.191 17.876 1.00 19.33 O
ATOM 5 O5' A A1920 -93.693 -9.170 19.308 1.00 19.33 O
ATOM 6 C5' A A1920 -93.509 -7.767 19.417 1.00 19.33 C
ATOM 7 C4' A A1920 -92.318 -7.312 18.620 1.00 19.33 C
ATOM 8 O4' A A1920 -91.248 -8.274 18.768 1.00 19.33 O
ATOM 9 C3' A A1920 -92.521 -7.196 17.122 1.00 19.33 C
ATOM 10 O3' A A1920 -93.137 -5.964 16.763 1.00 19.33 O
ATOM 11 C2' A A1920 -91.098 -7.357 16.582 1.00 19.33 C
ATOM 12 O2' A A1920 -90.394 -6.117 16.619 1.00 19.33 O
ATOM 13 C1' A A1920 -90.463 -8.312 17.610 1.00 19.33 C
ATOM 14 N9 A A1920 -90.405 -9.708 17.148 1.00 19.12 N
ATOM 15 C8 A A1920 -91.333 -10.642 17.464 1.00 19.12 C
ATOM 16 N7 A A1920 -91.085 -11.821 16.962 1.00 19.12 N
ATOM 17 C5 A A1920 -89.894 -11.662 16.285 1.00 19.12 C
ATOM 18 C6 A A1920 -89.130 -12.574 15.525 1.00 19.12 C
ATOM 19 N6 A A1920 -89.457 -13.857 15.347 1.00 19.12 N
ATOM 20 N1 A A1920 -87.998 -12.114 14.969 1.00 19.12 N
ATOM 21 C2 A A1920 -87.703 -10.818 15.182 1.00 19.12 C
ATOM 22 N3 A A1920 -88.356 -9.870 15.872 1.00 19.12 N
ATOM 23 C4 A A1920 -89.460 -10.362 16.411 1.00 19.12 C
ATOM 24 P A A1921 -93.897 -5.791 15.356 1.00 6.80 P
ATOM 25 OP1 A A1921 -94.452 -4.431 15.324 1.00 6.80 O
ATOM 26 OP2 A A1921 -94.823 -6.930 15.209 1.00 6.80 O
ATOM 27 O5' A A1921 -92.714 -5.913 14.296 1.00 6.80 O
TER
ATOM 1 O3' C B1831 -87.607 -6.097 22.809 1.00 11.38 O
ATOM 2 P G B1832 -88.944 -5.585 23.516 1.00 7.12 P
ATOM 3 OP1 G B1832 -89.295 -4.301 22.899 1.00 7.12 O
ATOM 4 OP2 G B1832 -88.685 -5.636 25.011 1.00 7.12 O
ATOM 5 O5' G B1832 -90.016 -6.696 23.084 1.00 7.12 O
ATOM 6 C5' G B1832 -90.346 -7.764 23.958 1.00 7.12 C
ATOM 7 C4' G B1832 -91.263 -8.762 23.307 1.00 7.12 C
ATOM 8 O4' G B1832 -91.175 -8.646 21.872 1.00 7.12 O
ATOM 9 C3' G B1832 -90.925 -10.209 23.552 1.00 7.12 C
ATOM 10 O3' G B1832 -91.326 -10.666 24.807 1.00 7.12 O
ATOM 11 C2' G B1832 -91.576 -10.917 22.379 1.00 7.12 C
ATOM 12 O2' G B1832 -92.972 -11.004 22.543 1.00 7.12 O
ATOM 13 C1' G B1832 -91.293 -9.929 21.273 1.00 7.12 C
ATOM 14 N9 G B1832 -90.036 -10.233 20.587 1.00 6.36 N
ATOM 15 C8 G B1832 -89.036 -9.334 20.384 1.00 6.36 C
ATOM 16 N7 G B1832 -88.019 -9.833 19.749 1.00 6.36 N
ATOM 17 C5 G B1832 -88.368 -11.151 19.523 1.00 6.36 C
ATOM 18 C6 G B1832 -87.639 -12.191 18.878 1.00 6.36 C
ATOM 19 O6 G B1832 -86.502 -12.150 18.351 1.00 6.36 O
ATOM 20 N1 G B1832 -88.352 -13.386 18.884 1.00 6.36 N
ATOM 21 C2 G B1832 -89.586 -13.542 19.428 1.00 6.36 C
ATOM 22 N2 G B1832 -90.088 -14.758 19.294 1.00 6.36 N
ATOM 23 N3 G B1832 -90.282 -12.595 20.037 1.00 6.36 N
ATOM 24 C4 G B1832 -89.612 -11.420 20.051 1.00 6.36 C
ATOM 25 P G B1833 -90.195 -11.124 25.837 1.00 12.06 P
ATOM 26 OP1 G B1833 -90.841 -11.256 27.177 1.00 12.06 O
ATOM 27 OP2 G B1833 -89.063 -10.186 25.684 1.00 12.06 O
ATOM 28 O5' G B1833 -89.796 -12.562 25.275 1.00 12.06 O
TER
Atoms:
OP1: (-95.899,-9.774,20.377)
OP2: (-95.773,-9.191,17.876)
C3': (-92.521,-7.196,17.122)
C1': (-90.463,-8.312,17.610)
C5': (-93.509,-7.767,19.417)
O4': (-91.248,-8.274,18.768)
C8: (-91.333,-10.642,17.464)
O2': (-90.394,-6.117,16.619)
C6: (-89.130,-12.574,15.525)
C5: (-89.894,-11.662,16.285)
C4: (-89.460,-10.362,16.411)
P: (-95.141,-9.786,19.091)
C4': (-92.318,-7.312,18.620)
C2': (-91.098,-7.357,16.582)
C2: (-87.703,-10.818,15.182)
N1: (-87.998,-12.114,14.969)
N3: (-88.356,-9.870,15.872)
N6: (-89.457,-13.857,15.347)
N7: (-91.085,-11.821,16.962)
N9: (-90.405,-9.708,17.148)
O5': (-93.693,-9.170,19.308)
O3': (-93.137,-5.964,16.763)
OP2: (-95.773,-9.191,17.876)
C3': (-92.521,-7.196,17.122)
C1': (-90.463,-8.312,17.610)
C5': (-93.509,-7.767,19.417)
O4': (-91.248,-8.274,18.768)
C8: (-91.333,-10.642,17.464)
O2': (-90.394,-6.117,16.619)
C6: (-89.130,-12.574,15.525)
C5: (-89.894,-11.662,16.285)
C4: (-89.460,-10.362,16.411)
P: (-95.141,-9.786,19.091)
C4': (-92.318,-7.312,18.620)
C2': (-91.098,-7.357,16.582)
C2: (-87.703,-10.818,15.182)
N1: (-87.998,-12.114,14.969)
N3: (-88.356,-9.870,15.872)
N6: (-89.457,-13.857,15.347)
N7: (-91.085,-11.821,16.962)
N9: (-90.405,-9.708,17.148)
O5': (-93.693,-9.170,19.308)
O3': (-93.137,-5.964,16.763)
OP1: (-89.295,-4.301,22.899)
OP2: (-88.685,-5.636,25.011)
C3': (-90.925,-10.209,23.552)
C1': (-91.293,-9.929,21.273)
C5': (-90.346,-7.764,23.958)
O6: (-86.502,-12.150,18.351)
O4': (-91.175,-8.646,21.872)
C8: (-89.036,-9.334,20.384)
C2: (-89.586,-13.542,19.428)
C6: (-87.639,-12.191,18.878)
C5: (-88.368,-11.151,19.523)
C4: (-89.612,-11.420,20.051)
P: (-88.944,-5.585,23.516)
C4': (-91.263,-8.762,23.307)
C2': (-91.576,-10.917,22.379)
O2': (-92.972,-11.004,22.543)
N1: (-88.352,-13.386,18.884)
N2: (-90.088,-14.758,19.294)
N3: (-90.282,-12.595,20.037)
N7: (-88.019,-9.833,19.749)
N9: (-90.036,-10.233,20.587)
O5': (-90.016,-6.696,23.084)
O3': (-91.326,-10.666,24.807)
OP2: (-88.685,-5.636,25.011)
C3': (-90.925,-10.209,23.552)
C1': (-91.293,-9.929,21.273)
C5': (-90.346,-7.764,23.958)
O6: (-86.502,-12.150,18.351)
O4': (-91.175,-8.646,21.872)
C8: (-89.036,-9.334,20.384)
C2: (-89.586,-13.542,19.428)
C6: (-87.639,-12.191,18.878)
C5: (-88.368,-11.151,19.523)
C4: (-89.612,-11.420,20.051)
P: (-88.944,-5.585,23.516)
C4': (-91.263,-8.762,23.307)
C2': (-91.576,-10.917,22.379)
O2': (-92.972,-11.004,22.543)
N1: (-88.352,-13.386,18.884)
N2: (-90.088,-14.758,19.294)
N3: (-90.282,-12.595,20.037)
N7: (-88.019,-9.833,19.749)
N9: (-90.036,-10.233,20.587)
O5': (-90.016,-6.696,23.084)
O3': (-91.326,-10.666,24.807)
Image (generated by PyMOL):