ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A293:A333

Extra

PDB:
ATOM 1 O3' G A 292 18.301 137.382 19.267 1.00 66.61 O
ATOM 2 P A A 293 17.354 138.432 20.022 1.00 67.00 P
ATOM 3 OP1 A A 293 17.207 139.631 19.162 1.00 67.16 O
ATOM 4 OP2 A A 293 17.810 138.594 21.426 1.00 68.84 O
ATOM 5 O5' A A 293 15.943 137.704 20.073 1.00 66.72 O
ATOM 6 C5' A A 293 15.395 137.043 18.921 1.00 65.73 C
ATOM 7 C4' A A 293 14.533 135.903 19.370 1.00 65.24 C
ATOM 8 O4' A A 293 15.383 134.896 19.963 1.00 65.17 O
ATOM 9 C3' A A 293 13.557 136.267 20.479 1.00 65.02 C
ATOM 10 O3' A A 293 12.362 136.830 19.952 1.00 65.47 O
ATOM 11 C2' A A 293 13.299 134.915 21.114 1.00 65.14 C
ATOM 12 O2' A A 293 12.415 134.170 20.305 1.00 63.81 O
ATOM 13 C1' A A 293 14.693 134.283 21.038 1.00 66.01 C
ATOM 14 N9 A A 293 15.511 134.408 22.249 1.00 66.60 N
ATOM 15 C8 A A 293 16.233 135.479 22.711 1.00 65.63 C
ATOM 16 N7 A A 293 16.883 135.239 23.820 1.00 65.57 N
ATOM 17 C5 A A 293 16.564 133.922 24.114 1.00 66.98 C
ATOM 18 C6 A A 293 16.944 133.059 25.160 1.00 67.81 C
ATOM 19 N6 A A 293 17.763 133.405 26.159 1.00 68.45 N
ATOM 20 N1 A A 293 16.445 131.802 25.146 1.00 67.23 N
ATOM 21 C2 A A 293 15.626 131.446 24.152 1.00 67.43 C
ATOM 22 N3 A A 293 15.202 132.159 23.121 1.00 67.35 N
ATOM 23 C4 A A 293 15.714 133.403 23.160 1.00 66.81 C
ATOM 24 P A A 294 11.805 138.219 20.535 1.00 66.49 P
ATOM 25 OP1 A A 294 10.854 138.758 19.533 1.00 67.17 O
ATOM 26 OP2 A A 294 12.962 139.050 20.972 1.00 65.37 O
ATOM 27 O5' A A 294 10.930 137.778 21.782 1.00 64.46 O
TER

ATOM 1 O3' C B 332 26.385 141.540 27.421 1.00 56.03 O
ATOM 2 P G B 333 26.399 140.767 26.022 1.00 58.05 P
ATOM 3 OP1 G B 333 27.751 140.956 25.425 1.00 57.01 O
ATOM 4 OP2 G B 333 25.196 141.239 25.295 1.00 59.31 O
ATOM 5 O5' G B 333 26.199 139.228 26.413 1.00 57.28 O
ATOM 6 C5' G B 333 27.341 138.368 26.668 1.00 56.90 C
ATOM 7 C4' G B 333 26.997 137.277 27.671 1.00 56.97 C
ATOM 8 O4' G B 333 25.829 137.651 28.450 1.00 58.24 O
ATOM 9 C3' G B 333 26.684 135.872 27.171 1.00 55.50 C
ATOM 10 O3' G B 333 27.882 135.130 26.959 1.00 54.74 O
ATOM 11 C2' G B 333 25.967 135.290 28.376 1.00 56.30 C
ATOM 12 O2' G B 333 26.914 135.009 29.391 1.00 54.93 O
ATOM 13 C1' G B 333 25.129 136.484 28.844 1.00 58.29 C
ATOM 14 N9 G B 333 23.770 136.555 28.302 1.00 60.39 N
ATOM 15 C8 G B 333 23.225 137.596 27.587 1.00 61.03 C
ATOM 16 N7 G B 333 21.978 137.398 27.256 1.00 61.10 N
ATOM 17 C5 G B 333 21.677 136.150 27.777 1.00 61.74 C
ATOM 18 C6 G B 333 20.467 135.409 27.737 1.00 62.39 C
ATOM 19 O6 G B 333 19.391 135.718 27.209 1.00 63.65 O
ATOM 20 N1 G B 333 20.590 134.194 28.398 1.00 62.33 N
ATOM 21 C2 G B 333 21.732 133.746 29.017 1.00 61.99 C
ATOM 22 N2 G B 333 21.645 132.548 29.628 1.00 62.25 N
ATOM 23 N3 G B 333 22.874 134.422 29.046 1.00 62.22 N
ATOM 24 C4 G B 333 22.773 135.609 28.419 1.00 61.14 C
ATOM 25 P U B 334 27.946 133.962 25.844 1.00 56.00 P
ATOM 26 OP1 U B 334 29.254 133.272 26.023 1.00 56.64 O
ATOM 27 OP2 U B 334 27.596 134.517 24.511 1.00 56.86 O
ATOM 28 O5' U B 334 26.855 132.896 26.294 1.00 56.04 O
TER

Atoms:
OP1: (17.207,139.631,19.162)
OP2: (17.810,138.594,21.426)
C3': (13.557,136.267,20.479)
C1': (14.693,134.283,21.038)
C5': (15.395,137.043,18.921)
O4': (15.383,134.896,19.963)
C8: (16.233,135.479,22.711)
O2': (12.415,134.170,20.305)
C6: (16.944,133.059,25.160)
C5: (16.564,133.922,24.114)
C4: (15.714,133.403,23.160)
P: (17.354,138.432,20.022)
C4': (14.533,135.903,19.370)
C2': (13.299,134.915,21.114)
C2: (15.626,131.446,24.152)
N1: (16.445,131.802,25.146)
N3: (15.202,132.159,23.121)
N6: (17.763,133.405,26.159)
N7: (16.883,135.239,23.820)
N9: (15.511,134.408,22.249)
O5': (15.943,137.704,20.073)
O3': (12.362,136.830,19.952)
OP1: (27.751,140.956,25.425)
OP2: (25.196,141.239,25.295)
C3': (26.684,135.872,27.171)
C1': (25.129,136.484,28.844)
C5': (27.341,138.368,26.668)
O6: (19.391,135.718,27.209)
O4': (25.829,137.651,28.450)
C8: (23.225,137.596,27.587)
C2: (21.732,133.746,29.017)
C6: (20.467,135.409,27.737)
C5: (21.677,136.150,27.777)
C4: (22.773,135.609,28.419)
P: (26.399,140.767,26.022)
C4': (26.997,137.277,27.671)
C2': (25.967,135.290,28.376)
O2': (26.914,135.009,29.391)
N1: (20.590,134.194,28.398)
N2: (21.645,132.548,29.628)
N3: (22.874,134.422,29.046)
N7: (21.978,137.398,27.256)
N9: (23.770,136.555,28.302)
O5': (26.199,139.228,26.413)
O3': (27.882,135.130,26.959)
Image (generated by PyMOL):
PyMOL image
show in jmol