Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0647:0734
Extra
PDB:
ATOM 1 O3' C A 646 28.878 84.656 36.219 1.00 45.85 O
ATOM 2 P A A 647 28.223 83.223 36.571 1.00 46.35 P
ATOM 3 OP1 A A 647 27.658 82.727 35.296 1.00 49.07 O
ATOM 4 OP2 A A 647 27.344 83.335 37.764 1.00 44.42 O
ATOM 5 O5' A A 647 29.458 82.293 36.940 1.00 43.35 O
ATOM 6 C5' A A 647 30.553 82.136 36.036 1.00 42.90 C
ATOM 7 C4' A A 647 31.764 81.662 36.791 1.00 44.79 C
ATOM 8 O4' A A 647 31.939 82.523 37.937 1.00 46.09 O
ATOM 9 C3' A A 647 31.657 80.271 37.385 1.00 44.82 C
ATOM 10 O3' A A 647 32.056 79.324 36.399 1.00 48.48 O
ATOM 11 C2' A A 647 32.625 80.332 38.561 1.00 44.36 C
ATOM 12 O2' A A 647 33.973 80.166 38.187 1.00 44.55 O
ATOM 13 C1' A A 647 32.455 81.778 39.018 1.00 44.65 C
ATOM 14 N9 A A 647 31.600 81.995 40.181 1.00 44.61 N
ATOM 15 C8 A A 647 30.371 82.607 40.243 1.00 43.04 C
ATOM 16 N7 A A 647 29.888 82.699 41.457 1.00 43.22 N
ATOM 17 C5 A A 647 30.860 82.097 42.247 1.00 44.52 C
ATOM 18 C6 A A 647 30.955 81.882 43.631 1.00 44.81 C
ATOM 19 N6 A A 647 30.023 82.285 44.502 1.00 45.93 N
ATOM 20 N1 A A 647 32.054 81.240 44.097 1.00 43.95 N
ATOM 21 C2 A A 647 32.988 80.853 43.222 1.00 43.78 C
ATOM 22 N3 A A 647 33.017 81.006 41.900 1.00 43.86 N
ATOM 23 C4 A A 647 31.911 81.644 41.472 1.00 44.66 C
ATOM 24 P A A 648 31.475 77.825 36.430 1.00 50.45 P
ATOM 25 OP1 A A 648 31.205 77.473 35.010 1.00 51.26 O
ATOM 26 OP2 A A 648 30.378 77.733 37.425 1.00 48.77 O
ATOM 27 O5' A A 648 32.705 76.960 36.965 1.00 49.73 O
TER
ATOM 1 O3' A B 733 37.593 79.448 47.208 1.00 50.50 O
ATOM 2 P G B 734 38.503 80.159 48.328 1.00 48.65 P
ATOM 3 OP1 G B 734 39.384 79.160 48.969 1.00 46.32 O
ATOM 4 OP2 G B 734 37.610 81.005 49.176 1.00 45.25 O
ATOM 5 O5' G B 734 39.435 81.093 47.432 1.00 47.67 O
ATOM 6 C5' G B 734 40.362 80.505 46.495 1.00 46.69 C
ATOM 7 C4' G B 734 40.047 80.927 45.070 1.00 47.36 C
ATOM 8 O4' G B 734 38.692 80.549 44.691 1.00 46.71 O
ATOM 9 C3' G B 734 40.083 82.406 44.745 1.00 47.11 C
ATOM 10 O3' G B 734 41.417 82.862 44.606 1.00 49.00 O
ATOM 11 C2' G B 734 39.331 82.442 43.420 1.00 44.90 C
ATOM 12 O2' G B 734 40.103 81.947 42.345 1.00 45.64 O
ATOM 13 C1' G B 734 38.214 81.437 43.689 1.00 43.18 C
ATOM 14 N9 G B 734 37.003 82.083 44.178 1.00 40.71 N
ATOM 15 C8 G B 734 36.537 82.101 45.467 1.00 41.22 C
ATOM 16 N7 G B 734 35.419 82.757 45.600 1.00 40.65 N
ATOM 17 C5 G B 734 35.131 83.203 44.322 1.00 40.44 C
ATOM 18 C6 G B 734 34.043 83.969 43.851 1.00 39.72 C
ATOM 19 O6 G B 734 33.094 84.413 44.490 1.00 38.91 O
ATOM 20 N1 G B 734 34.135 84.206 42.483 1.00 39.05 N
ATOM 21 C2 G B 734 35.150 83.752 41.673 1.00 40.55 C
ATOM 22 N2 G B 734 35.067 84.083 40.381 1.00 40.47 N
ATOM 23 N3 G B 734 36.172 83.027 42.103 1.00 40.09 N
ATOM 24 C4 G B 734 36.099 82.795 43.431 1.00 40.68 C
ATOM 25 P C B 735 41.841 84.276 45.235 1.00 48.80 P
ATOM 26 OP1 C B 735 43.315 84.265 45.379 1.00 47.84 O
ATOM 27 OP2 C B 735 40.985 84.519 46.427 1.00 47.66 O
ATOM 28 O5' C B 735 41.427 85.343 44.131 1.00 46.80 O
TER
ATOM 2 P A A 647 28.223 83.223 36.571 1.00 46.35 P
ATOM 3 OP1 A A 647 27.658 82.727 35.296 1.00 49.07 O
ATOM 4 OP2 A A 647 27.344 83.335 37.764 1.00 44.42 O
ATOM 5 O5' A A 647 29.458 82.293 36.940 1.00 43.35 O
ATOM 6 C5' A A 647 30.553 82.136 36.036 1.00 42.90 C
ATOM 7 C4' A A 647 31.764 81.662 36.791 1.00 44.79 C
ATOM 8 O4' A A 647 31.939 82.523 37.937 1.00 46.09 O
ATOM 9 C3' A A 647 31.657 80.271 37.385 1.00 44.82 C
ATOM 10 O3' A A 647 32.056 79.324 36.399 1.00 48.48 O
ATOM 11 C2' A A 647 32.625 80.332 38.561 1.00 44.36 C
ATOM 12 O2' A A 647 33.973 80.166 38.187 1.00 44.55 O
ATOM 13 C1' A A 647 32.455 81.778 39.018 1.00 44.65 C
ATOM 14 N9 A A 647 31.600 81.995 40.181 1.00 44.61 N
ATOM 15 C8 A A 647 30.371 82.607 40.243 1.00 43.04 C
ATOM 16 N7 A A 647 29.888 82.699 41.457 1.00 43.22 N
ATOM 17 C5 A A 647 30.860 82.097 42.247 1.00 44.52 C
ATOM 18 C6 A A 647 30.955 81.882 43.631 1.00 44.81 C
ATOM 19 N6 A A 647 30.023 82.285 44.502 1.00 45.93 N
ATOM 20 N1 A A 647 32.054 81.240 44.097 1.00 43.95 N
ATOM 21 C2 A A 647 32.988 80.853 43.222 1.00 43.78 C
ATOM 22 N3 A A 647 33.017 81.006 41.900 1.00 43.86 N
ATOM 23 C4 A A 647 31.911 81.644 41.472 1.00 44.66 C
ATOM 24 P A A 648 31.475 77.825 36.430 1.00 50.45 P
ATOM 25 OP1 A A 648 31.205 77.473 35.010 1.00 51.26 O
ATOM 26 OP2 A A 648 30.378 77.733 37.425 1.00 48.77 O
ATOM 27 O5' A A 648 32.705 76.960 36.965 1.00 49.73 O
TER
ATOM 1 O3' A B 733 37.593 79.448 47.208 1.00 50.50 O
ATOM 2 P G B 734 38.503 80.159 48.328 1.00 48.65 P
ATOM 3 OP1 G B 734 39.384 79.160 48.969 1.00 46.32 O
ATOM 4 OP2 G B 734 37.610 81.005 49.176 1.00 45.25 O
ATOM 5 O5' G B 734 39.435 81.093 47.432 1.00 47.67 O
ATOM 6 C5' G B 734 40.362 80.505 46.495 1.00 46.69 C
ATOM 7 C4' G B 734 40.047 80.927 45.070 1.00 47.36 C
ATOM 8 O4' G B 734 38.692 80.549 44.691 1.00 46.71 O
ATOM 9 C3' G B 734 40.083 82.406 44.745 1.00 47.11 C
ATOM 10 O3' G B 734 41.417 82.862 44.606 1.00 49.00 O
ATOM 11 C2' G B 734 39.331 82.442 43.420 1.00 44.90 C
ATOM 12 O2' G B 734 40.103 81.947 42.345 1.00 45.64 O
ATOM 13 C1' G B 734 38.214 81.437 43.689 1.00 43.18 C
ATOM 14 N9 G B 734 37.003 82.083 44.178 1.00 40.71 N
ATOM 15 C8 G B 734 36.537 82.101 45.467 1.00 41.22 C
ATOM 16 N7 G B 734 35.419 82.757 45.600 1.00 40.65 N
ATOM 17 C5 G B 734 35.131 83.203 44.322 1.00 40.44 C
ATOM 18 C6 G B 734 34.043 83.969 43.851 1.00 39.72 C
ATOM 19 O6 G B 734 33.094 84.413 44.490 1.00 38.91 O
ATOM 20 N1 G B 734 34.135 84.206 42.483 1.00 39.05 N
ATOM 21 C2 G B 734 35.150 83.752 41.673 1.00 40.55 C
ATOM 22 N2 G B 734 35.067 84.083 40.381 1.00 40.47 N
ATOM 23 N3 G B 734 36.172 83.027 42.103 1.00 40.09 N
ATOM 24 C4 G B 734 36.099 82.795 43.431 1.00 40.68 C
ATOM 25 P C B 735 41.841 84.276 45.235 1.00 48.80 P
ATOM 26 OP1 C B 735 43.315 84.265 45.379 1.00 47.84 O
ATOM 27 OP2 C B 735 40.985 84.519 46.427 1.00 47.66 O
ATOM 28 O5' C B 735 41.427 85.343 44.131 1.00 46.80 O
TER
Atoms:
OP1: (27.658,82.727,35.296)
OP2: (27.344,83.335,37.764)
C3': (31.657,80.271,37.385)
C1': (32.455,81.778,39.018)
C5': (30.553,82.136,36.036)
O4': (31.939,82.523,37.937)
C8: (30.371,82.607,40.243)
O2': (33.973,80.166,38.187)
C6: (30.955,81.882,43.631)
C5: (30.860,82.097,42.247)
C4: (31.911,81.644,41.472)
P: (28.223,83.223,36.571)
C4': (31.764,81.662,36.791)
C2': (32.625,80.332,38.561)
C2: (32.988,80.853,43.222)
N1: (32.054,81.240,44.097)
N3: (33.017,81.006,41.900)
N6: (30.023,82.285,44.502)
N7: (29.888,82.699,41.457)
N9: (31.600,81.995,40.181)
O5': (29.458,82.293,36.940)
O3': (32.056,79.324,36.399)
OP2: (27.344,83.335,37.764)
C3': (31.657,80.271,37.385)
C1': (32.455,81.778,39.018)
C5': (30.553,82.136,36.036)
O4': (31.939,82.523,37.937)
C8: (30.371,82.607,40.243)
O2': (33.973,80.166,38.187)
C6: (30.955,81.882,43.631)
C5: (30.860,82.097,42.247)
C4: (31.911,81.644,41.472)
P: (28.223,83.223,36.571)
C4': (31.764,81.662,36.791)
C2': (32.625,80.332,38.561)
C2: (32.988,80.853,43.222)
N1: (32.054,81.240,44.097)
N3: (33.017,81.006,41.900)
N6: (30.023,82.285,44.502)
N7: (29.888,82.699,41.457)
N9: (31.600,81.995,40.181)
O5': (29.458,82.293,36.940)
O3': (32.056,79.324,36.399)
OP1: (39.384,79.160,48.969)
OP2: (37.610,81.005,49.176)
C3': (40.083,82.406,44.745)
C1': (38.214,81.437,43.689)
C5': (40.362,80.505,46.495)
O6: (33.094,84.413,44.490)
O4': (38.692,80.549,44.691)
C8: (36.537,82.101,45.467)
C2: (35.150,83.752,41.673)
C6: (34.043,83.969,43.851)
C5: (35.131,83.203,44.322)
C4: (36.099,82.795,43.431)
P: (38.503,80.159,48.328)
C4': (40.047,80.927,45.070)
C2': (39.331,82.442,43.420)
O2': (40.103,81.947,42.345)
N1: (34.135,84.206,42.483)
N2: (35.067,84.083,40.381)
N3: (36.172,83.027,42.103)
N7: (35.419,82.757,45.600)
N9: (37.003,82.083,44.178)
O5': (39.435,81.093,47.432)
O3': (41.417,82.862,44.606)
OP2: (37.610,81.005,49.176)
C3': (40.083,82.406,44.745)
C1': (38.214,81.437,43.689)
C5': (40.362,80.505,46.495)
O6: (33.094,84.413,44.490)
O4': (38.692,80.549,44.691)
C8: (36.537,82.101,45.467)
C2: (35.150,83.752,41.673)
C6: (34.043,83.969,43.851)
C5: (35.131,83.203,44.322)
C4: (36.099,82.795,43.431)
P: (38.503,80.159,48.328)
C4': (40.047,80.927,45.070)
C2': (39.331,82.442,43.420)
O2': (40.103,81.947,42.345)
N1: (34.135,84.206,42.483)
N2: (35.067,84.083,40.381)
N3: (36.172,83.027,42.103)
N7: (35.419,82.757,45.600)
N9: (37.003,82.083,44.178)
O5': (39.435,81.093,47.432)
O3': (41.417,82.862,44.606)
Image (generated by PyMOL):