Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YTU:C4:D1
Extra
PDB:
ATOM 1 O3' C A 3 135.279 -10.552 38.127 1.00 68.12 O
ATOM 2 P A A 4 134.093 -9.756 37.470 0.50 64.70 P
ATOM 3 OP1 A A 4 132.922 -10.623 37.716 0.50 63.45 O
ATOM 4 OP2 A A 4 134.436 -9.379 36.088 0.50 63.79 O
ATOM 5 O5' A A 4 134.058 -8.441 38.390 0.50 67.11 O
ATOM 6 C5' A A 4 133.225 -8.446 39.557 0.50 72.71 C
ATOM 7 C4' A A 4 133.390 -7.229 40.451 0.50 75.24 C
ATOM 8 O4' A A 4 134.812 -6.985 40.700 0.50 77.42 O
ATOM 9 C3' A A 4 132.850 -5.915 39.893 0.50 75.90 C
ATOM 10 O3' A A 4 131.426 -5.783 40.043 0.50 73.90 O
ATOM 11 C2' A A 4 133.656 -4.962 40.768 0.50 76.72 C
ATOM 12 O2' A A 4 133.186 -4.957 42.098 0.50 76.29 O
ATOM 13 C1' A A 4 135.057 -5.587 40.712 0.50 79.42 C
ATOM 14 N9 A A 4 135.777 -5.192 39.497 1.00 81.15 N
ATOM 15 C8 A A 4 136.026 -5.976 38.398 1.00 82.01 C
ATOM 16 N7 A A 4 136.652 -5.359 37.414 1.00 81.96 N
ATOM 17 C5 A A 4 136.823 -4.068 37.872 0.50 81.26 C
ATOM 18 C6 A A 4 137.431 -2.931 37.281 0.50 81.30 C
ATOM 19 N6 A A 4 137.993 -2.926 36.056 1.00 80.84 N
ATOM 20 N1 A A 4 137.438 -1.791 38.012 0.50 81.41 N
ATOM 21 C2 A A 4 136.880 -1.794 39.236 0.50 81.39 C
ATOM 22 N3 A A 4 136.285 -2.799 39.885 0.50 81.12 N
ATOM 23 C4 A A 4 136.285 -3.935 39.150 0.50 81.56 C
TER
ATOM 1 O3' U B 0 141.680 5.536 38.455 0.50102.49 O
ATOM 2 P G B 1 143.118 4.865 38.183 1.00105.43 P
ATOM 3 OP1 G B 1 143.997 5.942 37.653 1.00105.22 O
ATOM 4 OP2 G B 1 142.932 3.654 37.338 1.00105.99 O
ATOM 5 O5' G B 1 143.637 4.434 39.652 1.00103.89 O
ATOM 6 C5' G B 1 143.808 3.065 39.996 1.00102.00 C
ATOM 7 C4' G B 1 142.597 2.515 40.737 1.00100.98 C
ATOM 8 O4' G B 1 141.402 2.498 39.904 1.00 99.78 O
ATOM 9 C3' G B 1 142.773 1.079 41.198 1.00100.28 C
ATOM 10 O3' G B 1 143.354 1.073 42.474 1.00102.17 O
ATOM 11 C2' G B 1 141.347 0.559 41.234 1.00 99.18 C
ATOM 12 O2' G B 1 140.667 0.869 42.422 1.00 98.55 O
ATOM 13 C1' G B 1 140.719 1.262 40.035 1.00 98.18 C
ATOM 14 N9 G B 1 140.893 0.469 38.812 1.00 97.94 N
ATOM 15 C8 G B 1 141.228 0.931 37.556 1.00 97.38 C
ATOM 16 N7 G B 1 141.323 -0.008 36.658 1.00 97.20 N
ATOM 17 C5 G B 1 141.043 -1.179 37.359 1.00 97.87 C
ATOM 18 C6 G B 1 140.993 -2.533 36.920 1.00 97.32 C
ATOM 19 O6 G B 1 141.198 -2.970 35.793 1.00 96.96 O
ATOM 20 N1 G B 1 140.662 -3.428 37.939 1.00 97.58 N
ATOM 21 C2 G B 1 140.402 -3.066 39.242 1.00 97.66 C
ATOM 22 N2 G B 1 140.096 -4.067 40.081 1.00 97.32 N
ATOM 23 N3 G B 1 140.451 -1.804 39.680 1.00 97.65 N
ATOM 24 C4 G B 1 140.775 -0.908 38.692 1.00 98.04 C
ATOM 25 P U B 2 144.869 0.581 42.645 1.00104.81 P
ATOM 26 OP1 U B 2 145.394 1.043 43.954 1.00104.79 O
ATOM 27 OP2 U B 2 145.606 0.915 41.394 1.00102.99 O
ATOM 28 O5' U B 2 144.644 -1.005 42.801 1.00105.51 O
TER
ATOM 2 P A A 4 134.093 -9.756 37.470 0.50 64.70 P
ATOM 3 OP1 A A 4 132.922 -10.623 37.716 0.50 63.45 O
ATOM 4 OP2 A A 4 134.436 -9.379 36.088 0.50 63.79 O
ATOM 5 O5' A A 4 134.058 -8.441 38.390 0.50 67.11 O
ATOM 6 C5' A A 4 133.225 -8.446 39.557 0.50 72.71 C
ATOM 7 C4' A A 4 133.390 -7.229 40.451 0.50 75.24 C
ATOM 8 O4' A A 4 134.812 -6.985 40.700 0.50 77.42 O
ATOM 9 C3' A A 4 132.850 -5.915 39.893 0.50 75.90 C
ATOM 10 O3' A A 4 131.426 -5.783 40.043 0.50 73.90 O
ATOM 11 C2' A A 4 133.656 -4.962 40.768 0.50 76.72 C
ATOM 12 O2' A A 4 133.186 -4.957 42.098 0.50 76.29 O
ATOM 13 C1' A A 4 135.057 -5.587 40.712 0.50 79.42 C
ATOM 14 N9 A A 4 135.777 -5.192 39.497 1.00 81.15 N
ATOM 15 C8 A A 4 136.026 -5.976 38.398 1.00 82.01 C
ATOM 16 N7 A A 4 136.652 -5.359 37.414 1.00 81.96 N
ATOM 17 C5 A A 4 136.823 -4.068 37.872 0.50 81.26 C
ATOM 18 C6 A A 4 137.431 -2.931 37.281 0.50 81.30 C
ATOM 19 N6 A A 4 137.993 -2.926 36.056 1.00 80.84 N
ATOM 20 N1 A A 4 137.438 -1.791 38.012 0.50 81.41 N
ATOM 21 C2 A A 4 136.880 -1.794 39.236 0.50 81.39 C
ATOM 22 N3 A A 4 136.285 -2.799 39.885 0.50 81.12 N
ATOM 23 C4 A A 4 136.285 -3.935 39.150 0.50 81.56 C
TER
ATOM 1 O3' U B 0 141.680 5.536 38.455 0.50102.49 O
ATOM 2 P G B 1 143.118 4.865 38.183 1.00105.43 P
ATOM 3 OP1 G B 1 143.997 5.942 37.653 1.00105.22 O
ATOM 4 OP2 G B 1 142.932 3.654 37.338 1.00105.99 O
ATOM 5 O5' G B 1 143.637 4.434 39.652 1.00103.89 O
ATOM 6 C5' G B 1 143.808 3.065 39.996 1.00102.00 C
ATOM 7 C4' G B 1 142.597 2.515 40.737 1.00100.98 C
ATOM 8 O4' G B 1 141.402 2.498 39.904 1.00 99.78 O
ATOM 9 C3' G B 1 142.773 1.079 41.198 1.00100.28 C
ATOM 10 O3' G B 1 143.354 1.073 42.474 1.00102.17 O
ATOM 11 C2' G B 1 141.347 0.559 41.234 1.00 99.18 C
ATOM 12 O2' G B 1 140.667 0.869 42.422 1.00 98.55 O
ATOM 13 C1' G B 1 140.719 1.262 40.035 1.00 98.18 C
ATOM 14 N9 G B 1 140.893 0.469 38.812 1.00 97.94 N
ATOM 15 C8 G B 1 141.228 0.931 37.556 1.00 97.38 C
ATOM 16 N7 G B 1 141.323 -0.008 36.658 1.00 97.20 N
ATOM 17 C5 G B 1 141.043 -1.179 37.359 1.00 97.87 C
ATOM 18 C6 G B 1 140.993 -2.533 36.920 1.00 97.32 C
ATOM 19 O6 G B 1 141.198 -2.970 35.793 1.00 96.96 O
ATOM 20 N1 G B 1 140.662 -3.428 37.939 1.00 97.58 N
ATOM 21 C2 G B 1 140.402 -3.066 39.242 1.00 97.66 C
ATOM 22 N2 G B 1 140.096 -4.067 40.081 1.00 97.32 N
ATOM 23 N3 G B 1 140.451 -1.804 39.680 1.00 97.65 N
ATOM 24 C4 G B 1 140.775 -0.908 38.692 1.00 98.04 C
ATOM 25 P U B 2 144.869 0.581 42.645 1.00104.81 P
ATOM 26 OP1 U B 2 145.394 1.043 43.954 1.00104.79 O
ATOM 27 OP2 U B 2 145.606 0.915 41.394 1.00102.99 O
ATOM 28 O5' U B 2 144.644 -1.005 42.801 1.00105.51 O
TER
Atoms:
OP1: (132.922,-10.623,37.716)
OP2: (134.436,-9.379,36.088)
C3': (132.850,-5.915,39.893)
C1': (135.057,-5.587,40.712)
C5': (133.225,-8.446,39.557)
O4': (134.812,-6.985,40.700)
C8: (136.026,-5.976,38.398)
O2': (133.186,-4.957,42.098)
C6: (137.431,-2.931,37.281)
C5: (136.823,-4.068,37.872)
C4: (136.285,-3.935,39.150)
P: (134.093,-9.756,37.470)
C4': (133.390,-7.229,40.451)
C2': (133.656,-4.962,40.768)
C2: (136.880,-1.794,39.236)
N1: (137.438,-1.791,38.012)
N3: (136.285,-2.799,39.885)
N6: (137.993,-2.926,36.056)
N7: (136.652,-5.359,37.414)
N9: (135.777,-5.192,39.497)
O5': (134.058,-8.441,38.390)
O3': (131.426,-5.783,40.043)
OP2: (134.436,-9.379,36.088)
C3': (132.850,-5.915,39.893)
C1': (135.057,-5.587,40.712)
C5': (133.225,-8.446,39.557)
O4': (134.812,-6.985,40.700)
C8: (136.026,-5.976,38.398)
O2': (133.186,-4.957,42.098)
C6: (137.431,-2.931,37.281)
C5: (136.823,-4.068,37.872)
C4: (136.285,-3.935,39.150)
P: (134.093,-9.756,37.470)
C4': (133.390,-7.229,40.451)
C2': (133.656,-4.962,40.768)
C2: (136.880,-1.794,39.236)
N1: (137.438,-1.791,38.012)
N3: (136.285,-2.799,39.885)
N6: (137.993,-2.926,36.056)
N7: (136.652,-5.359,37.414)
N9: (135.777,-5.192,39.497)
O5': (134.058,-8.441,38.390)
O3': (131.426,-5.783,40.043)
OP1: (143.997,5.942,37.653)
OP2: (142.932,3.654,37.338)
C3': (142.773,1.079,41.198)
C1': (140.719,1.262,40.035)
C5': (143.808,3.065,39.996)
O6: (141.198,-2.970,35.793)
O4': (141.402,2.498,39.904)
C8: (141.228,0.931,37.556)
C2: (140.402,-3.066,39.242)
C6: (140.993,-2.533,36.920)
C5: (141.043,-1.179,37.359)
C4: (140.775,-0.908,38.692)
P: (143.118,4.865,38.183)
C4': (142.597,2.515,40.737)
C2': (141.347,0.559,41.234)
O2': (140.667,0.869,42.422)
N1: (140.662,-3.428,37.939)
N2: (140.096,-4.067,40.081)
N3: (140.451,-1.804,39.680)
N7: (141.323,-0.008,36.658)
N9: (140.893,0.469,38.812)
O5': (143.637,4.434,39.652)
O3': (143.354,1.073,42.474)
OP2: (142.932,3.654,37.338)
C3': (142.773,1.079,41.198)
C1': (140.719,1.262,40.035)
C5': (143.808,3.065,39.996)
O6: (141.198,-2.970,35.793)
O4': (141.402,2.498,39.904)
C8: (141.228,0.931,37.556)
C2: (140.402,-3.066,39.242)
C6: (140.993,-2.533,36.920)
C5: (141.043,-1.179,37.359)
C4: (140.775,-0.908,38.692)
P: (143.118,4.865,38.183)
C4': (142.597,2.515,40.737)
C2': (141.347,0.559,41.234)
O2': (140.667,0.869,42.422)
N1: (140.662,-3.428,37.939)
N2: (140.096,-4.067,40.081)
N3: (140.451,-1.804,39.680)
N7: (141.323,-0.008,36.658)
N9: (140.893,0.469,38.812)
O5': (143.637,4.434,39.652)
O3': (143.354,1.073,42.474)
Image (generated by PyMOL):