Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1239:A503
Extra
PDB:
ATOM 1 O3' G A1238 21.415 -90.041 -7.597 1.00 61.14 O
ATOM 2 P A A1239 21.426 -91.624 -7.289 1.00 62.27 P
ATOM 3 OP1 A A1239 21.808 -92.338 -8.542 1.00 56.09 O
ATOM 4 OP2 A A1239 20.145 -91.951 -6.613 1.00 50.68 O
ATOM 5 O5' A A1239 22.578 -91.814 -6.192 1.00 57.12 O
ATOM 6 C5' A A1239 22.665 -93.015 -5.412 1.00 53.16 C
ATOM 7 C4' A A1239 24.113 -93.449 -5.218 1.00 52.83 C
ATOM 8 O4' A A1239 24.760 -93.667 -6.497 1.00 55.34 O
ATOM 9 C3' A A1239 25.021 -92.480 -4.485 1.00 47.94 C
ATOM 10 O3' A A1239 24.894 -92.710 -3.098 1.00 45.11 O
ATOM 11 C2' A A1239 26.421 -92.850 -4.972 1.00 52.91 C
ATOM 12 O2' A A1239 27.035 -93.834 -4.167 1.00 56.21 O
ATOM 13 C1' A A1239 26.146 -93.384 -6.382 1.00 55.19 C
ATOM 14 N9 A A1239 26.527 -92.465 -7.453 1.00 52.75 N
ATOM 15 C8 A A1239 25.714 -91.848 -8.369 1.00 57.01 C
ATOM 16 N7 A A1239 26.356 -91.087 -9.218 1.00 61.00 N
ATOM 17 C5 A A1239 27.681 -91.209 -8.839 1.00 65.30 C
ATOM 18 C6 A A1239 28.863 -90.662 -9.357 1.00 66.58 C
ATOM 19 N6 A A1239 28.897 -89.855 -10.422 1.00 62.62 N
ATOM 20 N1 A A1239 30.026 -90.987 -8.746 1.00 61.30 N
ATOM 21 C2 A A1239 29.986 -91.817 -7.690 1.00 60.53 C
ATOM 22 N3 A A1239 28.935 -92.403 -7.119 1.00 61.94 N
ATOM 23 C4 A A1239 27.800 -92.053 -7.748 1.00 60.75 C
ATOM 24 P G A1240 24.635 -91.475 -2.119 1.00 60.04 P
ATOM 25 OP1 G A1240 24.361 -91.999 -0.746 1.00 57.07 O
ATOM 26 OP2 G A1240 23.629 -90.605 -2.806 1.00 55.74 O
ATOM 27 O5' G A1240 26.036 -90.720 -2.074 1.00 56.23 O
TER
ATOM 1 O3' G B 502 29.446 -97.915 -9.000 1.00 56.07 O
ATOM 2 P G B 503 27.919 -97.459 -8.715 1.00 70.00 P
ATOM 3 OP1 G B 503 27.941 -96.451 -7.616 1.00 60.87 O
ATOM 4 OP2 G B 503 27.036 -98.654 -8.602 1.00 58.13 O
ATOM 5 O5' G B 503 27.469 -96.746 -10.064 1.00 55.40 O
ATOM 6 C5' G B 503 26.114 -96.382 -10.288 1.00 55.13 C
ATOM 7 C4' G B 503 26.066 -95.190 -11.206 1.00 59.16 C
ATOM 8 O4' G B 503 26.556 -94.018 -10.495 1.00 61.34 O
ATOM 9 C3' G B 503 26.958 -95.341 -12.426 1.00 56.69 C
ATOM 10 O3' G B 503 26.248 -95.922 -13.508 1.00 54.77 O
ATOM 11 C2' G B 503 27.387 -93.908 -12.710 1.00 57.98 C
ATOM 12 O2' G B 503 26.415 -93.184 -13.443 1.00 55.19 O
ATOM 13 C1' G B 503 27.504 -93.335 -11.292 1.00 60.05 C
ATOM 14 N9 G B 503 28.818 -93.570 -10.692 1.00 62.83 N
ATOM 15 C8 G B 503 29.109 -94.474 -9.694 1.00 59.87 C
ATOM 16 N7 G B 503 30.363 -94.473 -9.348 1.00 59.73 N
ATOM 17 C5 G B 503 30.941 -93.513 -10.157 1.00 63.59 C
ATOM 18 C6 G B 503 32.261 -93.062 -10.202 1.00 67.31 C
ATOM 19 O6 G B 503 33.213 -93.428 -9.505 1.00 60.51 O
ATOM 20 N1 G B 503 32.435 -92.074 -11.168 1.00 65.74 N
ATOM 21 C2 G B 503 31.440 -91.576 -11.977 1.00 62.11 C
ATOM 22 N2 G B 503 31.813 -90.630 -12.852 1.00 65.09 N
ATOM 23 N3 G B 503 30.179 -91.982 -11.929 1.00 56.94 N
ATOM 24 C4 G B 503 30.004 -92.949 -11.002 1.00 61.31 C
ATOM 25 P G B 504 27.033 -96.736 -14.647 1.00 62.69 P
ATOM 26 OP1 G B 504 26.055 -97.046 -15.722 1.00 56.41 O
ATOM 27 OP2 G B 504 27.782 -97.848 -13.987 1.00 58.84 O
ATOM 28 O5' G B 504 28.056 -95.674 -15.255 1.00 60.34 O
TER
ATOM 2 P A A1239 21.426 -91.624 -7.289 1.00 62.27 P
ATOM 3 OP1 A A1239 21.808 -92.338 -8.542 1.00 56.09 O
ATOM 4 OP2 A A1239 20.145 -91.951 -6.613 1.00 50.68 O
ATOM 5 O5' A A1239 22.578 -91.814 -6.192 1.00 57.12 O
ATOM 6 C5' A A1239 22.665 -93.015 -5.412 1.00 53.16 C
ATOM 7 C4' A A1239 24.113 -93.449 -5.218 1.00 52.83 C
ATOM 8 O4' A A1239 24.760 -93.667 -6.497 1.00 55.34 O
ATOM 9 C3' A A1239 25.021 -92.480 -4.485 1.00 47.94 C
ATOM 10 O3' A A1239 24.894 -92.710 -3.098 1.00 45.11 O
ATOM 11 C2' A A1239 26.421 -92.850 -4.972 1.00 52.91 C
ATOM 12 O2' A A1239 27.035 -93.834 -4.167 1.00 56.21 O
ATOM 13 C1' A A1239 26.146 -93.384 -6.382 1.00 55.19 C
ATOM 14 N9 A A1239 26.527 -92.465 -7.453 1.00 52.75 N
ATOM 15 C8 A A1239 25.714 -91.848 -8.369 1.00 57.01 C
ATOM 16 N7 A A1239 26.356 -91.087 -9.218 1.00 61.00 N
ATOM 17 C5 A A1239 27.681 -91.209 -8.839 1.00 65.30 C
ATOM 18 C6 A A1239 28.863 -90.662 -9.357 1.00 66.58 C
ATOM 19 N6 A A1239 28.897 -89.855 -10.422 1.00 62.62 N
ATOM 20 N1 A A1239 30.026 -90.987 -8.746 1.00 61.30 N
ATOM 21 C2 A A1239 29.986 -91.817 -7.690 1.00 60.53 C
ATOM 22 N3 A A1239 28.935 -92.403 -7.119 1.00 61.94 N
ATOM 23 C4 A A1239 27.800 -92.053 -7.748 1.00 60.75 C
ATOM 24 P G A1240 24.635 -91.475 -2.119 1.00 60.04 P
ATOM 25 OP1 G A1240 24.361 -91.999 -0.746 1.00 57.07 O
ATOM 26 OP2 G A1240 23.629 -90.605 -2.806 1.00 55.74 O
ATOM 27 O5' G A1240 26.036 -90.720 -2.074 1.00 56.23 O
TER
ATOM 1 O3' G B 502 29.446 -97.915 -9.000 1.00 56.07 O
ATOM 2 P G B 503 27.919 -97.459 -8.715 1.00 70.00 P
ATOM 3 OP1 G B 503 27.941 -96.451 -7.616 1.00 60.87 O
ATOM 4 OP2 G B 503 27.036 -98.654 -8.602 1.00 58.13 O
ATOM 5 O5' G B 503 27.469 -96.746 -10.064 1.00 55.40 O
ATOM 6 C5' G B 503 26.114 -96.382 -10.288 1.00 55.13 C
ATOM 7 C4' G B 503 26.066 -95.190 -11.206 1.00 59.16 C
ATOM 8 O4' G B 503 26.556 -94.018 -10.495 1.00 61.34 O
ATOM 9 C3' G B 503 26.958 -95.341 -12.426 1.00 56.69 C
ATOM 10 O3' G B 503 26.248 -95.922 -13.508 1.00 54.77 O
ATOM 11 C2' G B 503 27.387 -93.908 -12.710 1.00 57.98 C
ATOM 12 O2' G B 503 26.415 -93.184 -13.443 1.00 55.19 O
ATOM 13 C1' G B 503 27.504 -93.335 -11.292 1.00 60.05 C
ATOM 14 N9 G B 503 28.818 -93.570 -10.692 1.00 62.83 N
ATOM 15 C8 G B 503 29.109 -94.474 -9.694 1.00 59.87 C
ATOM 16 N7 G B 503 30.363 -94.473 -9.348 1.00 59.73 N
ATOM 17 C5 G B 503 30.941 -93.513 -10.157 1.00 63.59 C
ATOM 18 C6 G B 503 32.261 -93.062 -10.202 1.00 67.31 C
ATOM 19 O6 G B 503 33.213 -93.428 -9.505 1.00 60.51 O
ATOM 20 N1 G B 503 32.435 -92.074 -11.168 1.00 65.74 N
ATOM 21 C2 G B 503 31.440 -91.576 -11.977 1.00 62.11 C
ATOM 22 N2 G B 503 31.813 -90.630 -12.852 1.00 65.09 N
ATOM 23 N3 G B 503 30.179 -91.982 -11.929 1.00 56.94 N
ATOM 24 C4 G B 503 30.004 -92.949 -11.002 1.00 61.31 C
ATOM 25 P G B 504 27.033 -96.736 -14.647 1.00 62.69 P
ATOM 26 OP1 G B 504 26.055 -97.046 -15.722 1.00 56.41 O
ATOM 27 OP2 G B 504 27.782 -97.848 -13.987 1.00 58.84 O
ATOM 28 O5' G B 504 28.056 -95.674 -15.255 1.00 60.34 O
TER
Atoms:
OP1: (21.808,-92.338,-8.542)
OP2: (20.145,-91.951,-6.613)
C3': (25.021,-92.480,-4.485)
C1': (26.146,-93.384,-6.382)
C5': (22.665,-93.015,-5.412)
O4': (24.760,-93.667,-6.497)
C8: (25.714,-91.848,-8.369)
O2': (27.035,-93.834,-4.167)
C6: (28.863,-90.662,-9.357)
C5: (27.681,-91.209,-8.839)
C4: (27.800,-92.053,-7.748)
P: (21.426,-91.624,-7.289)
C4': (24.113,-93.449,-5.218)
C2': (26.421,-92.850,-4.972)
C2: (29.986,-91.817,-7.690)
N1: (30.026,-90.987,-8.746)
N3: (28.935,-92.403,-7.119)
N6: (28.897,-89.855,-10.422)
N7: (26.356,-91.087,-9.218)
N9: (26.527,-92.465,-7.453)
O5': (22.578,-91.814,-6.192)
O3': (24.894,-92.710,-3.098)
OP2: (20.145,-91.951,-6.613)
C3': (25.021,-92.480,-4.485)
C1': (26.146,-93.384,-6.382)
C5': (22.665,-93.015,-5.412)
O4': (24.760,-93.667,-6.497)
C8: (25.714,-91.848,-8.369)
O2': (27.035,-93.834,-4.167)
C6: (28.863,-90.662,-9.357)
C5: (27.681,-91.209,-8.839)
C4: (27.800,-92.053,-7.748)
P: (21.426,-91.624,-7.289)
C4': (24.113,-93.449,-5.218)
C2': (26.421,-92.850,-4.972)
C2: (29.986,-91.817,-7.690)
N1: (30.026,-90.987,-8.746)
N3: (28.935,-92.403,-7.119)
N6: (28.897,-89.855,-10.422)
N7: (26.356,-91.087,-9.218)
N9: (26.527,-92.465,-7.453)
O5': (22.578,-91.814,-6.192)
O3': (24.894,-92.710,-3.098)
OP1: (27.941,-96.451,-7.616)
OP2: (27.036,-98.654,-8.602)
C3': (26.958,-95.341,-12.426)
C1': (27.504,-93.335,-11.292)
C5': (26.114,-96.382,-10.288)
O6: (33.213,-93.428,-9.505)
O4': (26.556,-94.018,-10.495)
C8: (29.109,-94.474,-9.694)
C2: (31.440,-91.576,-11.977)
C6: (32.261,-93.062,-10.202)
C5: (30.941,-93.513,-10.157)
C4: (30.004,-92.949,-11.002)
P: (27.919,-97.459,-8.715)
C4': (26.066,-95.190,-11.206)
C2': (27.387,-93.908,-12.710)
O2': (26.415,-93.184,-13.443)
N1: (32.435,-92.074,-11.168)
N2: (31.813,-90.630,-12.852)
N3: (30.179,-91.982,-11.929)
N7: (30.363,-94.473,-9.348)
N9: (28.818,-93.570,-10.692)
O5': (27.469,-96.746,-10.064)
O3': (26.248,-95.922,-13.508)
OP2: (27.036,-98.654,-8.602)
C3': (26.958,-95.341,-12.426)
C1': (27.504,-93.335,-11.292)
C5': (26.114,-96.382,-10.288)
O6: (33.213,-93.428,-9.505)
O4': (26.556,-94.018,-10.495)
C8: (29.109,-94.474,-9.694)
C2: (31.440,-91.576,-11.977)
C6: (32.261,-93.062,-10.202)
C5: (30.941,-93.513,-10.157)
C4: (30.004,-92.949,-11.002)
P: (27.919,-97.459,-8.715)
C4': (26.066,-95.190,-11.206)
C2': (27.387,-93.908,-12.710)
O2': (26.415,-93.184,-13.443)
N1: (32.435,-92.074,-11.168)
N2: (31.813,-90.630,-12.852)
N3: (30.179,-91.982,-11.929)
N7: (30.363,-94.473,-9.348)
N9: (28.818,-93.570,-10.692)
O5': (27.469,-96.746,-10.064)
O3': (26.248,-95.922,-13.508)
Image (generated by PyMOL):