ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A513:A483

Extra

PDB:
ATOM 1 O3' U A 512 178.879 102.175 19.230 1.00 51.84 O
ATOM 2 P A A 513 179.216 101.267 17.954 1.00 50.07 P
ATOM 3 OP1 A A 513 179.320 99.878 18.505 1.00 49.15 O
ATOM 4 OP2 A A 513 180.345 101.875 17.216 1.00 48.24 O
ATOM 5 O5' A A 513 177.923 101.373 17.031 1.00 48.60 O
ATOM 6 C5' A A 513 176.800 100.502 17.223 1.00 46.56 C
ATOM 7 C4' A A 513 176.639 99.582 16.034 1.00 45.02 C
ATOM 8 O4' A A 513 176.459 100.372 14.831 1.00 43.75 O
ATOM 9 C3' A A 513 177.783 98.615 15.742 1.00 44.77 C
ATOM 10 O3' A A 513 177.207 97.384 15.307 1.00 46.54 O
ATOM 11 C2' A A 513 178.509 99.282 14.574 1.00 43.85 C
ATOM 12 O2' A A 513 179.169 98.375 13.715 1.00 45.44 O
ATOM 13 C1' A A 513 177.342 99.917 13.835 1.00 42.73 C
ATOM 14 N9 A A 513 177.643 101.023 12.931 1.00 40.47 N
ATOM 15 C8 A A 513 178.117 102.276 13.218 1.00 41.58 C
ATOM 16 N7 A A 513 178.208 103.061 12.168 1.00 40.32 N
ATOM 17 C5 A A 513 177.777 102.262 11.120 1.00 39.28 C
ATOM 18 C6 A A 513 177.629 102.506 9.746 1.00 37.27 C
ATOM 19 N6 A A 513 177.895 103.675 9.171 1.00 36.23 N
ATOM 20 N1 A A 513 177.189 101.495 8.973 1.00 34.98 N
ATOM 21 C2 A A 513 176.912 100.325 9.548 1.00 37.95 C
ATOM 22 N3 A A 513 177.003 99.972 10.830 1.00 39.58 N
ATOM 23 C4 A A 513 177.447 100.999 11.572 1.00 39.88 C
ATOM 24 P C A 514 176.772 96.270 16.389 1.00 48.26 P
ATOM 25 OP1 C A 514 175.510 95.613 15.912 1.00 47.45 O
ATOM 26 OP2 C A 514 176.804 96.904 17.736 1.00 48.45 O
ATOM 27 O5' C A 514 177.927 95.190 16.309 1.00 49.42 O
TER

ATOM 1 O3' C B 482 171.659 102.765 17.661 1.00 46.88 O
ATOM 2 P G B 483 173.179 102.370 17.362 1.00 47.21 P
ATOM 3 OP1 G B 483 173.915 102.879 18.574 1.00 46.38 O
ATOM 4 OP2 G B 483 173.250 100.932 16.985 1.00 46.69 O
ATOM 5 O5' G B 483 173.553 103.263 16.102 1.00 44.29 O
ATOM 6 C5' G B 483 174.067 104.571 16.302 1.00 44.08 C
ATOM 7 C4' G B 483 174.427 105.210 14.997 1.00 43.72 C
ATOM 8 O4' G B 483 175.299 104.337 14.243 1.00 44.72 O
ATOM 9 C3' G B 483 173.290 105.517 14.051 1.00 44.01 C
ATOM 10 O3' G B 483 172.675 106.723 14.435 1.00 43.57 O
ATOM 11 C2' G B 483 174.016 105.616 12.711 1.00 44.49 C
ATOM 12 O2' G B 483 174.701 106.844 12.544 1.00 45.38 O
ATOM 13 C1' G B 483 175.081 104.529 12.855 1.00 43.95 C
ATOM 14 N9 G B 483 174.663 103.256 12.274 1.00 42.64 N
ATOM 15 C8 G B 483 174.478 102.065 12.936 1.00 42.44 C
ATOM 16 N7 G B 483 174.075 101.103 12.154 1.00 43.10 N
ATOM 17 C5 G B 483 173.997 101.690 10.897 1.00 40.63 C
ATOM 18 C6 G B 483 173.624 101.135 9.650 1.00 38.99 C
ATOM 19 O6 G B 483 173.303 99.968 9.394 1.00 38.59 O
ATOM 20 N1 G B 483 173.665 102.084 8.635 1.00 36.52 N
ATOM 21 C2 G B 483 174.036 103.394 8.799 1.00 36.13 C
ATOM 22 N2 G B 483 174.000 104.153 7.708 1.00 34.53 N
ATOM 23 N3 G B 483 174.410 103.920 9.952 1.00 38.13 N
ATOM 24 C4 G B 483 174.361 103.018 10.953 1.00 40.25 C
ATOM 25 P G B 484 171.095 106.907 14.240 1.00 43.45 P
ATOM 26 OP1 G B 484 170.737 108.192 14.909 1.00 44.39 O
ATOM 27 OP2 G B 484 170.415 105.661 14.656 1.00 42.66 O
ATOM 28 O5' G B 484 170.944 107.123 12.676 1.00 41.94 O
TER

Atoms:
OP1: (179.320,99.878,18.505)
OP2: (180.345,101.875,17.216)
C3': (177.783,98.615,15.742)
C1': (177.342,99.917,13.835)
C5': (176.800,100.502,17.223)
O4': (176.459,100.372,14.831)
C8: (178.117,102.276,13.218)
O2': (179.169,98.375,13.715)
C6: (177.629,102.506,9.746)
C5: (177.777,102.262,11.120)
C4: (177.447,100.999,11.572)
P: (179.216,101.267,17.954)
C4': (176.639,99.582,16.034)
C2': (178.509,99.282,14.574)
C2: (176.912,100.325,9.548)
N1: (177.189,101.495,8.973)
N3: (177.003,99.972,10.830)
N6: (177.895,103.675,9.171)
N7: (178.208,103.061,12.168)
N9: (177.643,101.023,12.931)
O5': (177.923,101.373,17.031)
O3': (177.207,97.384,15.307)
OP1: (173.915,102.879,18.574)
OP2: (173.250,100.932,16.985)
C3': (173.290,105.517,14.051)
C1': (175.081,104.529,12.855)
C5': (174.067,104.571,16.302)
O6: (173.303,99.968,9.394)
O4': (175.299,104.337,14.243)
C8: (174.478,102.065,12.936)
C2: (174.036,103.394,8.799)
C6: (173.624,101.135,9.650)
C5: (173.997,101.690,10.897)
C4: (174.361,103.018,10.953)
P: (173.179,102.370,17.362)
C4': (174.427,105.210,14.997)
C2': (174.016,105.616,12.711)
O2': (174.701,106.844,12.544)
N1: (173.665,102.084,8.635)
N2: (174.000,104.153,7.708)
N3: (174.410,103.920,9.952)
N7: (174.075,101.103,12.154)
N9: (174.663,103.256,12.274)
O5': (173.553,103.263,16.102)
O3': (172.675,106.723,14.435)
Image (generated by PyMOL):
PyMOL image
show in jmol