Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1T0D:A5:A4
Extra
PDB:
ATOM 1 O3' G A 4 -2.039 1.321 11.467 1.00 16.28 O
ATOM 2 P U A 5 -2.100 -0.101 10.750 1.00 19.39 P
ATOM 3 OP1 U A 5 -2.400 -1.121 11.778 1.00 18.11 O
ATOM 4 OP2 U A 5 -0.885 -0.239 9.902 1.00 19.69 O
ATOM 5 O5' U A 5 -3.368 0.012 9.790 1.00 19.12 O
ATOM 6 C5' U A 5 -4.643 0.343 10.324 1.00 22.56 C
ATOM 7 C4' U A 5 -5.615 0.657 9.211 1.00 23.32 C
ATOM 8 O4' U A 5 -5.164 1.824 8.478 1.00 22.61 O
ATOM 9 C3' U A 5 -5.756 -0.398 8.132 1.00 24.45 C
ATOM 10 O3' U A 5 -6.628 -1.431 8.552 1.00 28.95 O
ATOM 11 C2' U A 5 -6.354 0.417 6.998 1.00 22.90 C
ATOM 12 O2' U A 5 -7.718 0.692 7.212 1.00 25.31 O
ATOM 13 C1' U A 5 -5.570 1.721 7.127 1.00 21.18 C
ATOM 14 N1 U A 5 -4.372 1.723 6.279 1.00 20.70 N
ATOM 15 C2 U A 5 -4.562 1.962 4.935 1.00 20.61 C
ATOM 16 O2 U A 5 -5.655 2.179 4.458 1.00 23.07 O
ATOM 17 N3 U A 5 -3.428 1.933 4.168 1.00 20.19 N
ATOM 18 C4 U A 5 -2.143 1.697 4.597 1.00 19.76 C
ATOM 19 O4 U A 5 -1.238 1.640 3.768 1.00 21.02 O
ATOM 20 C5 U A 5 -2.014 1.468 6.012 1.00 19.30 C
ATOM 21 C6 U A 5 -3.109 1.487 6.787 1.00 19.67 C
ATOM 22 P G A 6 -6.632 -2.836 7.773 1.00 34.14 P
ATOM 23 OP1 G A 6 -7.632 -3.674 8.481 1.00 32.76 O
ATOM 24 OP2 G A 6 -5.240 -3.329 7.608 1.00 31.18 O
ATOM 25 O5' G A 6 -7.206 -2.473 6.328 1.00 33.85 O
TER
ATOM 1 O3' G B 3 3.407 4.210 11.054 1.00 17.21 O
ATOM 2 P G B 4 2.828 2.792 10.570 1.00 21.10 P
ATOM 3 OP1 G B 4 3.214 1.839 11.645 1.00 19.14 O
ATOM 4 OP2 G B 4 3.240 2.537 9.173 1.00 15.38 O
ATOM 5 O5' G B 4 1.240 2.980 10.582 1.00 17.63 O
ATOM 6 C5' G B 4 0.544 3.180 11.809 1.00 17.32 C
ATOM 7 C4' G B 4 -0.922 3.468 11.558 1.00 17.48 C
ATOM 8 O4' G B 4 -1.069 4.702 10.802 1.00 16.75 O
ATOM 9 C3' G B 4 -1.674 2.459 10.713 1.00 17.15 C
ATOM 10 O3' G B 4 -2.039 1.321 11.467 1.00 16.28 O
ATOM 11 C2' G B 4 -2.878 3.275 10.258 1.00 17.99 C
ATOM 12 O2' G B 4 -3.882 3.437 11.239 1.00 19.35 O
ATOM 13 C1' G B 4 -2.223 4.625 9.982 1.00 15.85 C
ATOM 14 N9 G B 4 -1.824 4.694 8.582 1.00 16.82 N
ATOM 15 C8 G B 4 -0.565 4.545 8.039 1.00 16.15 C
ATOM 16 N7 G B 4 -0.560 4.633 6.735 1.00 15.17 N
ATOM 17 C5 G B 4 -1.890 4.857 6.401 1.00 15.45 C
ATOM 18 C6 G B 4 -2.508 5.032 5.139 1.00 14.39 C
ATOM 19 O6 G B 4 -1.980 5.046 4.016 1.00 12.59 O
ATOM 20 N1 G B 4 -3.887 5.218 5.266 1.00 12.69 N
ATOM 21 C2 G B 4 -4.577 5.248 6.451 1.00 13.88 C
ATOM 22 N2 G B 4 -5.909 5.439 6.377 1.00 12.07 N
ATOM 23 N3 G B 4 -4.012 5.098 7.628 1.00 13.84 N
ATOM 24 C4 G B 4 -2.679 4.903 7.531 1.00 15.71 C
ATOM 25 P U B 5 -2.100 -0.101 10.750 1.00 19.39 P
ATOM 26 OP1 U B 5 -2.400 -1.121 11.778 1.00 18.11 O
ATOM 27 OP2 U B 5 -0.885 -0.239 9.902 1.00 19.69 O
ATOM 28 O5' U B 5 -3.368 0.012 9.790 1.00 19.12 O
TER
ATOM 2 P U A 5 -2.100 -0.101 10.750 1.00 19.39 P
ATOM 3 OP1 U A 5 -2.400 -1.121 11.778 1.00 18.11 O
ATOM 4 OP2 U A 5 -0.885 -0.239 9.902 1.00 19.69 O
ATOM 5 O5' U A 5 -3.368 0.012 9.790 1.00 19.12 O
ATOM 6 C5' U A 5 -4.643 0.343 10.324 1.00 22.56 C
ATOM 7 C4' U A 5 -5.615 0.657 9.211 1.00 23.32 C
ATOM 8 O4' U A 5 -5.164 1.824 8.478 1.00 22.61 O
ATOM 9 C3' U A 5 -5.756 -0.398 8.132 1.00 24.45 C
ATOM 10 O3' U A 5 -6.628 -1.431 8.552 1.00 28.95 O
ATOM 11 C2' U A 5 -6.354 0.417 6.998 1.00 22.90 C
ATOM 12 O2' U A 5 -7.718 0.692 7.212 1.00 25.31 O
ATOM 13 C1' U A 5 -5.570 1.721 7.127 1.00 21.18 C
ATOM 14 N1 U A 5 -4.372 1.723 6.279 1.00 20.70 N
ATOM 15 C2 U A 5 -4.562 1.962 4.935 1.00 20.61 C
ATOM 16 O2 U A 5 -5.655 2.179 4.458 1.00 23.07 O
ATOM 17 N3 U A 5 -3.428 1.933 4.168 1.00 20.19 N
ATOM 18 C4 U A 5 -2.143 1.697 4.597 1.00 19.76 C
ATOM 19 O4 U A 5 -1.238 1.640 3.768 1.00 21.02 O
ATOM 20 C5 U A 5 -2.014 1.468 6.012 1.00 19.30 C
ATOM 21 C6 U A 5 -3.109 1.487 6.787 1.00 19.67 C
ATOM 22 P G A 6 -6.632 -2.836 7.773 1.00 34.14 P
ATOM 23 OP1 G A 6 -7.632 -3.674 8.481 1.00 32.76 O
ATOM 24 OP2 G A 6 -5.240 -3.329 7.608 1.00 31.18 O
ATOM 25 O5' G A 6 -7.206 -2.473 6.328 1.00 33.85 O
TER
ATOM 1 O3' G B 3 3.407 4.210 11.054 1.00 17.21 O
ATOM 2 P G B 4 2.828 2.792 10.570 1.00 21.10 P
ATOM 3 OP1 G B 4 3.214 1.839 11.645 1.00 19.14 O
ATOM 4 OP2 G B 4 3.240 2.537 9.173 1.00 15.38 O
ATOM 5 O5' G B 4 1.240 2.980 10.582 1.00 17.63 O
ATOM 6 C5' G B 4 0.544 3.180 11.809 1.00 17.32 C
ATOM 7 C4' G B 4 -0.922 3.468 11.558 1.00 17.48 C
ATOM 8 O4' G B 4 -1.069 4.702 10.802 1.00 16.75 O
ATOM 9 C3' G B 4 -1.674 2.459 10.713 1.00 17.15 C
ATOM 10 O3' G B 4 -2.039 1.321 11.467 1.00 16.28 O
ATOM 11 C2' G B 4 -2.878 3.275 10.258 1.00 17.99 C
ATOM 12 O2' G B 4 -3.882 3.437 11.239 1.00 19.35 O
ATOM 13 C1' G B 4 -2.223 4.625 9.982 1.00 15.85 C
ATOM 14 N9 G B 4 -1.824 4.694 8.582 1.00 16.82 N
ATOM 15 C8 G B 4 -0.565 4.545 8.039 1.00 16.15 C
ATOM 16 N7 G B 4 -0.560 4.633 6.735 1.00 15.17 N
ATOM 17 C5 G B 4 -1.890 4.857 6.401 1.00 15.45 C
ATOM 18 C6 G B 4 -2.508 5.032 5.139 1.00 14.39 C
ATOM 19 O6 G B 4 -1.980 5.046 4.016 1.00 12.59 O
ATOM 20 N1 G B 4 -3.887 5.218 5.266 1.00 12.69 N
ATOM 21 C2 G B 4 -4.577 5.248 6.451 1.00 13.88 C
ATOM 22 N2 G B 4 -5.909 5.439 6.377 1.00 12.07 N
ATOM 23 N3 G B 4 -4.012 5.098 7.628 1.00 13.84 N
ATOM 24 C4 G B 4 -2.679 4.903 7.531 1.00 15.71 C
ATOM 25 P U B 5 -2.100 -0.101 10.750 1.00 19.39 P
ATOM 26 OP1 U B 5 -2.400 -1.121 11.778 1.00 18.11 O
ATOM 27 OP2 U B 5 -0.885 -0.239 9.902 1.00 19.69 O
ATOM 28 O5' U B 5 -3.368 0.012 9.790 1.00 19.12 O
TER
Atoms:
C4: (-2.143,1.697,4.597)
N3: (-3.428,1.933,4.168)
OP1: (-2.400,-1.121,11.778)
OP2: (-0.885,-0.239,9.902)
C2: (-4.562,1.962,4.935)
C1': (-5.570,1.721,7.127)
C3': (-5.756,-0.398,8.132)
O5': (-3.368,0.012,9.790)
O4': (-5.164,1.824,8.478)
C5': (-4.643,0.343,10.324)
P: (-2.100,-0.101,10.750)
C4': (-5.615,0.657,9.211)
C2': (-6.354,0.417,6.998)
O2': (-7.718,0.692,7.212)
N1: (-4.372,1.723,6.279)
O4: (-1.238,1.640,3.768)
O2: (-5.655,2.179,4.458)
C6: (-3.109,1.487,6.787)
C5: (-2.014,1.468,6.012)
O3': (-6.628,-1.431,8.552)
N3: (-3.428,1.933,4.168)
OP1: (-2.400,-1.121,11.778)
OP2: (-0.885,-0.239,9.902)
C2: (-4.562,1.962,4.935)
C1': (-5.570,1.721,7.127)
C3': (-5.756,-0.398,8.132)
O5': (-3.368,0.012,9.790)
O4': (-5.164,1.824,8.478)
C5': (-4.643,0.343,10.324)
P: (-2.100,-0.101,10.750)
C4': (-5.615,0.657,9.211)
C2': (-6.354,0.417,6.998)
O2': (-7.718,0.692,7.212)
N1: (-4.372,1.723,6.279)
O4: (-1.238,1.640,3.768)
O2: (-5.655,2.179,4.458)
C6: (-3.109,1.487,6.787)
C5: (-2.014,1.468,6.012)
O3': (-6.628,-1.431,8.552)
OP1: (3.214,1.839,11.645)
OP2: (3.240,2.537,9.173)
C3': (-1.674,2.459,10.713)
C1': (-2.223,4.625,9.982)
C5': (0.544,3.180,11.809)
O6: (-1.980,5.046,4.016)
O4': (-1.069,4.702,10.802)
C8: (-0.565,4.545,8.039)
C2: (-4.577,5.248,6.451)
C6: (-2.508,5.032,5.139)
C5: (-1.890,4.857,6.401)
C4: (-2.679,4.903,7.531)
P: (2.828,2.792,10.570)
C4': (-0.922,3.468,11.558)
C2': (-2.878,3.275,10.258)
O2': (-3.882,3.437,11.239)
N1: (-3.887,5.218,5.266)
N2: (-5.909,5.439,6.377)
N3: (-4.012,5.098,7.628)
N7: (-0.560,4.633,6.735)
N9: (-1.824,4.694,8.582)
O5': (1.240,2.980,10.582)
O3': (-2.039,1.321,11.467)
OP2: (3.240,2.537,9.173)
C3': (-1.674,2.459,10.713)
C1': (-2.223,4.625,9.982)
C5': (0.544,3.180,11.809)
O6: (-1.980,5.046,4.016)
O4': (-1.069,4.702,10.802)
C8: (-0.565,4.545,8.039)
C2: (-4.577,5.248,6.451)
C6: (-2.508,5.032,5.139)
C5: (-1.890,4.857,6.401)
C4: (-2.679,4.903,7.531)
P: (2.828,2.792,10.570)
C4': (-0.922,3.468,11.558)
C2': (-2.878,3.275,10.258)
O2': (-3.882,3.437,11.239)
N1: (-3.887,5.218,5.266)
N2: (-5.909,5.439,6.377)
N3: (-4.012,5.098,7.628)
N7: (-0.560,4.633,6.735)
N9: (-1.824,4.694,8.582)
O5': (1.240,2.980,10.582)
O3': (-2.039,1.321,11.467)
Image (generated by PyMOL):