Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKZ:A21:A23
Extra
PDB:
ATOM 1 O3' A A 20 5.933 9.284 -25.052 1.00 61.50 O
ATOM 2 P A A 21 4.618 9.605 -24.189 1.00 62.83 P
ATOM 3 OP1 A A 21 4.589 11.067 -23.982 1.00 66.75 O
ATOM 4 OP2 A A 21 4.640 8.716 -23.000 1.00 64.55 O
ATOM 5 O5' A A 21 3.436 9.176 -25.167 1.00 65.21 O
ATOM 6 C5' A A 21 3.166 9.917 -26.354 1.00 55.82 C
ATOM 7 C4' A A 21 1.724 9.794 -26.784 1.00 47.31 C
ATOM 8 O4' A A 21 1.444 8.416 -27.154 1.00 43.06 O
ATOM 9 C3' A A 21 0.685 10.173 -25.729 1.00 51.17 C
ATOM 10 O3' A A 21 -0.400 10.850 -26.365 1.00 59.03 O
ATOM 11 C2' A A 21 0.213 8.809 -25.212 1.00 50.37 C
ATOM 12 O2' A A 21 -1.087 8.799 -24.643 1.00 52.78 O
ATOM 13 C1' A A 21 0.284 7.974 -26.482 1.00 41.26 C
ATOM 14 N9 A A 21 0.405 6.537 -26.256 1.00 40.86 N
ATOM 15 C8 A A 21 1.557 5.843 -26.023 1.00 47.13 C
ATOM 16 N7 A A 21 1.370 4.558 -25.862 1.00 45.73 N
ATOM 17 C5 A A 21 0.009 4.392 -26.008 1.00 36.38 C
ATOM 18 C6 A A 21 -0.799 3.250 -25.948 1.00 39.12 C
ATOM 19 N6 A A 21 -0.307 2.036 -25.725 1.00 18.84 N
ATOM 20 N1 A A 21 -2.131 3.397 -26.139 1.00 40.94 N
ATOM 21 C2 A A 21 -2.586 4.638 -26.371 1.00 44.16 C
ATOM 22 N3 A A 21 -1.919 5.796 -26.447 1.00 44.66 N
ATOM 23 C4 A A 21 -0.604 5.603 -26.258 1.00 40.12 C
ATOM 24 P U A 22 -0.357 12.447 -26.556 1.00 98.31 P
ATOM 25 OP1 U A 22 0.915 12.925 -25.959 1.00 96.57 O
ATOM 26 OP2 U A 22 -1.634 12.980 -26.032 1.00100.38 O
ATOM 27 O5' U A 22 -0.305 12.621 -28.137 1.00103.95 O
TER
ATOM 1 O3' U B 22 1.500 13.133 -32.403 1.00106.51 O
ATOM 2 P G B 23 1.390 11.609 -32.848 1.00 89.42 P
ATOM 3 OP1 G B 23 2.171 11.456 -34.099 1.00 90.63 O
ATOM 4 OP2 G B 23 -0.047 11.248 -32.846 1.00 87.98 O
ATOM 5 O5' G B 23 2.125 10.874 -31.652 1.00 77.13 O
ATOM 6 C5' G B 23 3.535 10.723 -31.638 1.00 66.14 C
ATOM 7 C4' G B 23 3.914 9.422 -30.994 1.00 54.65 C
ATOM 8 O4' G B 23 3.070 9.208 -29.829 1.00 53.15 O
ATOM 9 C3' G B 23 3.671 8.176 -31.831 1.00 49.50 C
ATOM 10 O3' G B 23 4.675 7.933 -32.799 1.00 43.69 O
ATOM 11 C2' G B 23 3.553 7.093 -30.770 1.00 44.39 C
ATOM 12 O2' G B 23 4.822 6.777 -30.232 1.00 44.57 O
ATOM 13 C1' G B 23 2.771 7.833 -29.700 1.00 47.53 C
ATOM 14 N9 G B 23 1.320 7.637 -29.856 1.00 44.15 N
ATOM 15 C8 G B 23 0.333 8.546 -30.152 1.00 44.62 C
ATOM 16 N7 G B 23 -0.850 7.984 -30.196 1.00 46.11 N
ATOM 17 C5 G B 23 -0.623 6.639 -29.916 1.00 42.07 C
ATOM 18 C6 G B 23 -1.507 5.531 -29.820 1.00 37.01 C
ATOM 19 O6 G B 23 -2.721 5.494 -29.969 1.00 41.52 O
ATOM 20 N1 G B 23 -0.853 4.346 -29.514 1.00 37.79 N
ATOM 21 C2 G B 23 0.502 4.233 -29.316 1.00 40.02 C
ATOM 22 N2 G B 23 0.950 2.999 -29.031 1.00 35.63 N
ATOM 23 N3 G B 23 1.342 5.254 -29.396 1.00 40.87 N
ATOM 24 C4 G B 23 0.716 6.414 -29.702 1.00 43.32 C
ATOM 25 P G B 24 4.280 7.278 -34.205 1.00 62.28 P
ATOM 26 OP1 G B 24 5.514 7.240 -35.038 1.00 61.82 O
ATOM 27 OP2 G B 24 3.103 8.019 -34.702 1.00 64.06 O
ATOM 28 O5' G B 24 3.863 5.802 -33.800 1.00 36.03 O
TER
ATOM 2 P A A 21 4.618 9.605 -24.189 1.00 62.83 P
ATOM 3 OP1 A A 21 4.589 11.067 -23.982 1.00 66.75 O
ATOM 4 OP2 A A 21 4.640 8.716 -23.000 1.00 64.55 O
ATOM 5 O5' A A 21 3.436 9.176 -25.167 1.00 65.21 O
ATOM 6 C5' A A 21 3.166 9.917 -26.354 1.00 55.82 C
ATOM 7 C4' A A 21 1.724 9.794 -26.784 1.00 47.31 C
ATOM 8 O4' A A 21 1.444 8.416 -27.154 1.00 43.06 O
ATOM 9 C3' A A 21 0.685 10.173 -25.729 1.00 51.17 C
ATOM 10 O3' A A 21 -0.400 10.850 -26.365 1.00 59.03 O
ATOM 11 C2' A A 21 0.213 8.809 -25.212 1.00 50.37 C
ATOM 12 O2' A A 21 -1.087 8.799 -24.643 1.00 52.78 O
ATOM 13 C1' A A 21 0.284 7.974 -26.482 1.00 41.26 C
ATOM 14 N9 A A 21 0.405 6.537 -26.256 1.00 40.86 N
ATOM 15 C8 A A 21 1.557 5.843 -26.023 1.00 47.13 C
ATOM 16 N7 A A 21 1.370 4.558 -25.862 1.00 45.73 N
ATOM 17 C5 A A 21 0.009 4.392 -26.008 1.00 36.38 C
ATOM 18 C6 A A 21 -0.799 3.250 -25.948 1.00 39.12 C
ATOM 19 N6 A A 21 -0.307 2.036 -25.725 1.00 18.84 N
ATOM 20 N1 A A 21 -2.131 3.397 -26.139 1.00 40.94 N
ATOM 21 C2 A A 21 -2.586 4.638 -26.371 1.00 44.16 C
ATOM 22 N3 A A 21 -1.919 5.796 -26.447 1.00 44.66 N
ATOM 23 C4 A A 21 -0.604 5.603 -26.258 1.00 40.12 C
ATOM 24 P U A 22 -0.357 12.447 -26.556 1.00 98.31 P
ATOM 25 OP1 U A 22 0.915 12.925 -25.959 1.00 96.57 O
ATOM 26 OP2 U A 22 -1.634 12.980 -26.032 1.00100.38 O
ATOM 27 O5' U A 22 -0.305 12.621 -28.137 1.00103.95 O
TER
ATOM 1 O3' U B 22 1.500 13.133 -32.403 1.00106.51 O
ATOM 2 P G B 23 1.390 11.609 -32.848 1.00 89.42 P
ATOM 3 OP1 G B 23 2.171 11.456 -34.099 1.00 90.63 O
ATOM 4 OP2 G B 23 -0.047 11.248 -32.846 1.00 87.98 O
ATOM 5 O5' G B 23 2.125 10.874 -31.652 1.00 77.13 O
ATOM 6 C5' G B 23 3.535 10.723 -31.638 1.00 66.14 C
ATOM 7 C4' G B 23 3.914 9.422 -30.994 1.00 54.65 C
ATOM 8 O4' G B 23 3.070 9.208 -29.829 1.00 53.15 O
ATOM 9 C3' G B 23 3.671 8.176 -31.831 1.00 49.50 C
ATOM 10 O3' G B 23 4.675 7.933 -32.799 1.00 43.69 O
ATOM 11 C2' G B 23 3.553 7.093 -30.770 1.00 44.39 C
ATOM 12 O2' G B 23 4.822 6.777 -30.232 1.00 44.57 O
ATOM 13 C1' G B 23 2.771 7.833 -29.700 1.00 47.53 C
ATOM 14 N9 G B 23 1.320 7.637 -29.856 1.00 44.15 N
ATOM 15 C8 G B 23 0.333 8.546 -30.152 1.00 44.62 C
ATOM 16 N7 G B 23 -0.850 7.984 -30.196 1.00 46.11 N
ATOM 17 C5 G B 23 -0.623 6.639 -29.916 1.00 42.07 C
ATOM 18 C6 G B 23 -1.507 5.531 -29.820 1.00 37.01 C
ATOM 19 O6 G B 23 -2.721 5.494 -29.969 1.00 41.52 O
ATOM 20 N1 G B 23 -0.853 4.346 -29.514 1.00 37.79 N
ATOM 21 C2 G B 23 0.502 4.233 -29.316 1.00 40.02 C
ATOM 22 N2 G B 23 0.950 2.999 -29.031 1.00 35.63 N
ATOM 23 N3 G B 23 1.342 5.254 -29.396 1.00 40.87 N
ATOM 24 C4 G B 23 0.716 6.414 -29.702 1.00 43.32 C
ATOM 25 P G B 24 4.280 7.278 -34.205 1.00 62.28 P
ATOM 26 OP1 G B 24 5.514 7.240 -35.038 1.00 61.82 O
ATOM 27 OP2 G B 24 3.103 8.019 -34.702 1.00 64.06 O
ATOM 28 O5' G B 24 3.863 5.802 -33.800 1.00 36.03 O
TER
Atoms:
OP1: (4.589,11.067,-23.982)
OP2: (4.640,8.716,-23.000)
C3': (0.685,10.173,-25.729)
C1': (0.284,7.974,-26.482)
C5': (3.166,9.917,-26.354)
O4': (1.444,8.416,-27.154)
C8: (1.557,5.843,-26.023)
O2': (-1.087,8.799,-24.643)
C6: (-0.799,3.250,-25.948)
C5: (0.009,4.392,-26.008)
C4: (-0.604,5.603,-26.258)
P: (4.618,9.605,-24.189)
C4': (1.724,9.794,-26.784)
C2': (0.213,8.809,-25.212)
C2: (-2.586,4.638,-26.371)
N1: (-2.131,3.397,-26.139)
N3: (-1.919,5.796,-26.447)
N6: (-0.307,2.036,-25.725)
N7: (1.370,4.558,-25.862)
N9: (0.405,6.537,-26.256)
O5': (3.436,9.176,-25.167)
O3': (-0.400,10.850,-26.365)
OP2: (4.640,8.716,-23.000)
C3': (0.685,10.173,-25.729)
C1': (0.284,7.974,-26.482)
C5': (3.166,9.917,-26.354)
O4': (1.444,8.416,-27.154)
C8: (1.557,5.843,-26.023)
O2': (-1.087,8.799,-24.643)
C6: (-0.799,3.250,-25.948)
C5: (0.009,4.392,-26.008)
C4: (-0.604,5.603,-26.258)
P: (4.618,9.605,-24.189)
C4': (1.724,9.794,-26.784)
C2': (0.213,8.809,-25.212)
C2: (-2.586,4.638,-26.371)
N1: (-2.131,3.397,-26.139)
N3: (-1.919,5.796,-26.447)
N6: (-0.307,2.036,-25.725)
N7: (1.370,4.558,-25.862)
N9: (0.405,6.537,-26.256)
O5': (3.436,9.176,-25.167)
O3': (-0.400,10.850,-26.365)
OP1: (2.171,11.456,-34.099)
OP2: (-0.047,11.248,-32.846)
C3': (3.671,8.176,-31.831)
C1': (2.771,7.833,-29.700)
C5': (3.535,10.723,-31.638)
O6: (-2.721,5.494,-29.969)
O4': (3.070,9.208,-29.829)
C8: (0.333,8.546,-30.152)
C2: (0.502,4.233,-29.316)
C6: (-1.507,5.531,-29.820)
C5: (-0.623,6.639,-29.916)
C4: (0.716,6.414,-29.702)
P: (1.390,11.609,-32.848)
C4': (3.914,9.422,-30.994)
C2': (3.553,7.093,-30.770)
O2': (4.822,6.777,-30.232)
N1: (-0.853,4.346,-29.514)
N2: (0.950,2.999,-29.031)
N3: (1.342,5.254,-29.396)
N7: (-0.850,7.984,-30.196)
N9: (1.320,7.637,-29.856)
O5': (2.125,10.874,-31.652)
O3': (4.675,7.933,-32.799)
OP2: (-0.047,11.248,-32.846)
C3': (3.671,8.176,-31.831)
C1': (2.771,7.833,-29.700)
C5': (3.535,10.723,-31.638)
O6: (-2.721,5.494,-29.969)
O4': (3.070,9.208,-29.829)
C8: (0.333,8.546,-30.152)
C2: (0.502,4.233,-29.316)
C6: (-1.507,5.531,-29.820)
C5: (-0.623,6.639,-29.916)
C4: (0.716,6.414,-29.702)
P: (1.390,11.609,-32.848)
C4': (3.914,9.422,-30.994)
C2': (3.553,7.093,-30.770)
O2': (4.822,6.777,-30.232)
N1: (-0.853,4.346,-29.514)
N2: (0.950,2.999,-29.031)
N3: (1.342,5.254,-29.396)
N7: (-0.850,7.984,-30.196)
N9: (1.320,7.637,-29.856)
O5': (2.125,10.874,-31.652)
O3': (4.675,7.933,-32.799)
Image (generated by PyMOL):