Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0647:0734
Extra
PDB:
ATOM 1 O3' C A 646 28.527 84.547 35.901 1.00 36.02 O
ATOM 2 P A A 647 27.932 83.082 36.236 1.00 35.82 P
ATOM 3 OP1 A A 647 27.400 82.572 34.944 1.00 37.56 O
ATOM 4 OP2 A A 647 27.031 83.173 37.410 1.00 32.42 O
ATOM 5 O5' A A 647 29.201 82.205 36.639 1.00 31.41 O
ATOM 6 C5' A A 647 30.341 82.110 35.767 1.00 31.78 C
ATOM 7 C4' A A 647 31.536 81.571 36.523 1.00 35.54 C
ATOM 8 O4' A A 647 31.798 82.411 37.675 1.00 38.58 O
ATOM 9 C3' A A 647 31.399 80.168 37.089 1.00 35.28 C
ATOM 10 O3' A A 647 31.804 79.243 36.079 1.00 38.73 O
ATOM 11 C2' A A 647 32.388 80.176 38.250 1.00 35.43 C
ATOM 12 O2' A A 647 33.707 79.957 37.803 1.00 34.93 O
ATOM 13 C1' A A 647 32.278 81.620 38.747 1.00 35.43 C
ATOM 14 N9 A A 647 31.409 81.848 39.903 1.00 34.89 N
ATOM 15 C8 A A 647 30.180 82.471 39.918 1.00 34.28 C
ATOM 16 N7 A A 647 29.653 82.569 41.111 1.00 32.70 N
ATOM 17 C5 A A 647 30.589 81.964 41.937 1.00 32.59 C
ATOM 18 C6 A A 647 30.619 81.756 43.318 1.00 33.72 C
ATOM 19 N6 A A 647 29.647 82.161 44.134 1.00 35.98 N
ATOM 20 N1 A A 647 31.691 81.116 43.840 1.00 33.28 N
ATOM 21 C2 A A 647 32.667 80.724 43.009 1.00 34.46 C
ATOM 22 N3 A A 647 32.755 80.871 41.687 1.00 34.98 N
ATOM 23 C4 A A 647 31.670 81.507 41.208 1.00 33.13 C
ATOM 24 P A A 648 31.261 77.725 36.087 1.00 37.08 P
ATOM 25 OP1 A A 648 31.119 77.349 34.646 1.00 40.19 O
ATOM 26 OP2 A A 648 30.084 77.626 36.986 1.00 34.67 O
ATOM 27 O5' A A 648 32.473 76.893 36.704 1.00 32.70 O
TER
ATOM 1 O3' A B 733 37.254 79.376 46.990 1.00 40.68 O
ATOM 2 P G B 734 38.295 80.023 48.032 1.00 38.02 P
ATOM 3 OP1 G B 734 39.182 78.964 48.574 1.00 34.87 O
ATOM 4 OP2 G B 734 37.519 80.886 48.961 1.00 35.08 O
ATOM 5 O5' G B 734 39.182 80.953 47.086 1.00 38.62 O
ATOM 6 C5' G B 734 40.090 80.367 46.132 1.00 37.67 C
ATOM 7 C4' G B 734 39.770 80.832 44.725 1.00 38.90 C
ATOM 8 O4' G B 734 38.411 80.463 44.353 1.00 36.55 O
ATOM 9 C3' G B 734 39.796 82.328 44.465 1.00 38.87 C
ATOM 10 O3' G B 734 41.135 82.798 44.330 1.00 39.44 O
ATOM 11 C2' G B 734 39.027 82.414 43.149 1.00 37.36 C
ATOM 12 O2' G B 734 39.805 82.013 42.037 1.00 38.06 O
ATOM 13 C1' G B 734 37.929 81.371 43.376 1.00 34.24 C
ATOM 14 N9 G B 734 36.692 81.969 43.862 1.00 31.56 N
ATOM 15 C8 G B 734 36.215 81.969 45.149 1.00 31.75 C
ATOM 16 N7 G B 734 35.084 82.611 45.275 1.00 31.09 N
ATOM 17 C5 G B 734 34.796 83.058 43.994 1.00 27.95 C
ATOM 18 C6 G B 734 33.700 83.807 43.517 1.00 27.94 C
ATOM 19 O6 G B 734 32.724 84.221 44.149 1.00 24.92 O
ATOM 20 N1 G B 734 33.804 84.055 42.152 1.00 26.69 N
ATOM 21 C2 G B 734 34.826 83.612 41.349 1.00 30.01 C
ATOM 22 N2 G B 734 34.750 83.936 40.050 1.00 31.09 N
ATOM 23 N3 G B 734 35.849 82.899 41.784 1.00 28.85 N
ATOM 24 C4 G B 734 35.772 82.665 43.108 1.00 29.42 C
ATOM 25 P C B 735 41.557 84.217 44.959 1.00 37.41 P
ATOM 26 OP1 C B 735 43.036 84.186 45.076 1.00 34.06 O
ATOM 27 OP2 C B 735 40.725 84.489 46.166 1.00 36.17 O
ATOM 28 O5' C B 735 41.130 85.283 43.858 1.00 35.48 O
TER
ATOM 2 P A A 647 27.932 83.082 36.236 1.00 35.82 P
ATOM 3 OP1 A A 647 27.400 82.572 34.944 1.00 37.56 O
ATOM 4 OP2 A A 647 27.031 83.173 37.410 1.00 32.42 O
ATOM 5 O5' A A 647 29.201 82.205 36.639 1.00 31.41 O
ATOM 6 C5' A A 647 30.341 82.110 35.767 1.00 31.78 C
ATOM 7 C4' A A 647 31.536 81.571 36.523 1.00 35.54 C
ATOM 8 O4' A A 647 31.798 82.411 37.675 1.00 38.58 O
ATOM 9 C3' A A 647 31.399 80.168 37.089 1.00 35.28 C
ATOM 10 O3' A A 647 31.804 79.243 36.079 1.00 38.73 O
ATOM 11 C2' A A 647 32.388 80.176 38.250 1.00 35.43 C
ATOM 12 O2' A A 647 33.707 79.957 37.803 1.00 34.93 O
ATOM 13 C1' A A 647 32.278 81.620 38.747 1.00 35.43 C
ATOM 14 N9 A A 647 31.409 81.848 39.903 1.00 34.89 N
ATOM 15 C8 A A 647 30.180 82.471 39.918 1.00 34.28 C
ATOM 16 N7 A A 647 29.653 82.569 41.111 1.00 32.70 N
ATOM 17 C5 A A 647 30.589 81.964 41.937 1.00 32.59 C
ATOM 18 C6 A A 647 30.619 81.756 43.318 1.00 33.72 C
ATOM 19 N6 A A 647 29.647 82.161 44.134 1.00 35.98 N
ATOM 20 N1 A A 647 31.691 81.116 43.840 1.00 33.28 N
ATOM 21 C2 A A 647 32.667 80.724 43.009 1.00 34.46 C
ATOM 22 N3 A A 647 32.755 80.871 41.687 1.00 34.98 N
ATOM 23 C4 A A 647 31.670 81.507 41.208 1.00 33.13 C
ATOM 24 P A A 648 31.261 77.725 36.087 1.00 37.08 P
ATOM 25 OP1 A A 648 31.119 77.349 34.646 1.00 40.19 O
ATOM 26 OP2 A A 648 30.084 77.626 36.986 1.00 34.67 O
ATOM 27 O5' A A 648 32.473 76.893 36.704 1.00 32.70 O
TER
ATOM 1 O3' A B 733 37.254 79.376 46.990 1.00 40.68 O
ATOM 2 P G B 734 38.295 80.023 48.032 1.00 38.02 P
ATOM 3 OP1 G B 734 39.182 78.964 48.574 1.00 34.87 O
ATOM 4 OP2 G B 734 37.519 80.886 48.961 1.00 35.08 O
ATOM 5 O5' G B 734 39.182 80.953 47.086 1.00 38.62 O
ATOM 6 C5' G B 734 40.090 80.367 46.132 1.00 37.67 C
ATOM 7 C4' G B 734 39.770 80.832 44.725 1.00 38.90 C
ATOM 8 O4' G B 734 38.411 80.463 44.353 1.00 36.55 O
ATOM 9 C3' G B 734 39.796 82.328 44.465 1.00 38.87 C
ATOM 10 O3' G B 734 41.135 82.798 44.330 1.00 39.44 O
ATOM 11 C2' G B 734 39.027 82.414 43.149 1.00 37.36 C
ATOM 12 O2' G B 734 39.805 82.013 42.037 1.00 38.06 O
ATOM 13 C1' G B 734 37.929 81.371 43.376 1.00 34.24 C
ATOM 14 N9 G B 734 36.692 81.969 43.862 1.00 31.56 N
ATOM 15 C8 G B 734 36.215 81.969 45.149 1.00 31.75 C
ATOM 16 N7 G B 734 35.084 82.611 45.275 1.00 31.09 N
ATOM 17 C5 G B 734 34.796 83.058 43.994 1.00 27.95 C
ATOM 18 C6 G B 734 33.700 83.807 43.517 1.00 27.94 C
ATOM 19 O6 G B 734 32.724 84.221 44.149 1.00 24.92 O
ATOM 20 N1 G B 734 33.804 84.055 42.152 1.00 26.69 N
ATOM 21 C2 G B 734 34.826 83.612 41.349 1.00 30.01 C
ATOM 22 N2 G B 734 34.750 83.936 40.050 1.00 31.09 N
ATOM 23 N3 G B 734 35.849 82.899 41.784 1.00 28.85 N
ATOM 24 C4 G B 734 35.772 82.665 43.108 1.00 29.42 C
ATOM 25 P C B 735 41.557 84.217 44.959 1.00 37.41 P
ATOM 26 OP1 C B 735 43.036 84.186 45.076 1.00 34.06 O
ATOM 27 OP2 C B 735 40.725 84.489 46.166 1.00 36.17 O
ATOM 28 O5' C B 735 41.130 85.283 43.858 1.00 35.48 O
TER
Atoms:
OP1: (27.400,82.572,34.944)
OP2: (27.031,83.173,37.410)
C3': (31.399,80.168,37.089)
C1': (32.278,81.620,38.747)
C5': (30.341,82.110,35.767)
O4': (31.798,82.411,37.675)
C8: (30.180,82.471,39.918)
O2': (33.707,79.957,37.803)
C6: (30.619,81.756,43.318)
C5: (30.589,81.964,41.937)
C4: (31.670,81.507,41.208)
P: (27.932,83.082,36.236)
C4': (31.536,81.571,36.523)
C2': (32.388,80.176,38.250)
C2: (32.667,80.724,43.009)
N1: (31.691,81.116,43.840)
N3: (32.755,80.871,41.687)
N6: (29.647,82.161,44.134)
N7: (29.653,82.569,41.111)
N9: (31.409,81.848,39.903)
O5': (29.201,82.205,36.639)
O3': (31.804,79.243,36.079)
OP2: (27.031,83.173,37.410)
C3': (31.399,80.168,37.089)
C1': (32.278,81.620,38.747)
C5': (30.341,82.110,35.767)
O4': (31.798,82.411,37.675)
C8: (30.180,82.471,39.918)
O2': (33.707,79.957,37.803)
C6: (30.619,81.756,43.318)
C5: (30.589,81.964,41.937)
C4: (31.670,81.507,41.208)
P: (27.932,83.082,36.236)
C4': (31.536,81.571,36.523)
C2': (32.388,80.176,38.250)
C2: (32.667,80.724,43.009)
N1: (31.691,81.116,43.840)
N3: (32.755,80.871,41.687)
N6: (29.647,82.161,44.134)
N7: (29.653,82.569,41.111)
N9: (31.409,81.848,39.903)
O5': (29.201,82.205,36.639)
O3': (31.804,79.243,36.079)
OP1: (39.182,78.964,48.574)
OP2: (37.519,80.886,48.961)
C3': (39.796,82.328,44.465)
C1': (37.929,81.371,43.376)
C5': (40.090,80.367,46.132)
O6: (32.724,84.221,44.149)
O4': (38.411,80.463,44.353)
C8: (36.215,81.969,45.149)
C2: (34.826,83.612,41.349)
C6: (33.700,83.807,43.517)
C5: (34.796,83.058,43.994)
C4: (35.772,82.665,43.108)
P: (38.295,80.023,48.032)
C4': (39.770,80.832,44.725)
C2': (39.027,82.414,43.149)
O2': (39.805,82.013,42.037)
N1: (33.804,84.055,42.152)
N2: (34.750,83.936,40.050)
N3: (35.849,82.899,41.784)
N7: (35.084,82.611,45.275)
N9: (36.692,81.969,43.862)
O5': (39.182,80.953,47.086)
O3': (41.135,82.798,44.330)
OP2: (37.519,80.886,48.961)
C3': (39.796,82.328,44.465)
C1': (37.929,81.371,43.376)
C5': (40.090,80.367,46.132)
O6: (32.724,84.221,44.149)
O4': (38.411,80.463,44.353)
C8: (36.215,81.969,45.149)
C2: (34.826,83.612,41.349)
C6: (33.700,83.807,43.517)
C5: (34.796,83.058,43.994)
C4: (35.772,82.665,43.108)
P: (38.295,80.023,48.032)
C4': (39.770,80.832,44.725)
C2': (39.027,82.414,43.149)
O2': (39.805,82.013,42.037)
N1: (33.804,84.055,42.152)
N2: (34.750,83.936,40.050)
N3: (35.849,82.899,41.784)
N7: (35.084,82.611,45.275)
N9: (36.692,81.969,43.862)
O5': (39.182,80.953,47.086)
O3': (41.135,82.798,44.330)
Image (generated by PyMOL):