ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIQ:A163:A109

Extra

PDB:
ATOM 1 O3' G A 162 27.224 11.559 13.677 1.00 13.31 O
ATOM 2 P A A 163 25.891 11.058 12.957 1.00 14.39 P
ATOM 3 OP1 A A 163 25.631 11.973 11.828 1.00 14.77 O
ATOM 4 OP2 A A 163 24.840 10.893 13.987 1.00 15.45 O
ATOM 5 O5' A A 163 26.270 9.586 12.456 1.00 15.60 O
ATOM 6 C5' A A 163 25.979 8.428 13.264 1.00 16.51 C
ATOM 7 C4' A A 163 26.026 7.145 12.440 1.00 18.05 C
ATOM 8 O4' A A 163 25.065 7.193 11.346 1.00 19.33 O
ATOM 9 C3' A A 163 27.369 6.852 11.778 1.00 18.37 C
ATOM 10 O3' A A 163 27.608 5.439 11.703 1.00 17.15 O
ATOM 11 C2' A A 163 27.180 7.485 10.405 1.00 19.32 C
ATOM 12 O2' A A 163 28.056 7.005 9.409 1.00 19.87 O
ATOM 13 C1' A A 163 25.745 7.072 10.108 1.00 21.00 C
ATOM 14 N9 A A 163 25.164 7.936 9.084 1.00 22.78 N
ATOM 15 C8 A A 163 24.988 9.293 9.158 1.00 23.61 C
ATOM 16 N7 A A 163 24.465 9.829 8.084 1.00 23.96 N
ATOM 17 C5 A A 163 24.289 8.745 7.241 1.00 24.18 C
ATOM 18 C6 A A 163 23.771 8.641 5.935 1.00 24.28 C
ATOM 19 N6 A A 163 23.323 9.702 5.259 1.00 23.54 N
ATOM 20 N1 A A 163 23.727 7.413 5.360 1.00 24.73 N
ATOM 21 C2 A A 163 24.177 6.354 6.052 1.00 24.77 C
ATOM 22 N3 A A 163 24.688 6.331 7.289 1.00 24.87 N
ATOM 23 C4 A A 163 24.717 7.568 7.835 1.00 23.99 C
ATOM 24 P G A 164 28.553 4.704 12.773 1.00 16.21 P
ATOM 25 OP1 G A 164 28.979 3.410 12.192 1.00 16.15 O
ATOM 26 OP2 G A 164 27.861 4.730 14.085 1.00 15.15 O
ATOM 27 O5' G A 164 29.825 5.677 12.860 1.00 15.03 O
TER

ATOM 1 O3' U B 108 14.750 11.594 7.216 1.00 30.96 O
ATOM 2 P G B 109 15.323 10.306 7.985 1.00 33.58 P
ATOM 3 OP1 G B 109 15.518 9.270 6.943 1.00 33.67 O
ATOM 4 OP2 G B 109 14.521 9.996 9.191 1.00 32.96 O
ATOM 5 O5' G B 109 16.728 10.837 8.532 1.00 35.68 O
ATOM 6 C5' G B 109 17.911 10.620 7.782 1.00 38.80 C
ATOM 7 C4' G B 109 18.898 11.752 7.988 1.00 40.69 C
ATOM 8 O4' G B 109 19.507 11.624 9.298 1.00 42.32 O
ATOM 9 C3' G B 109 20.015 11.766 6.951 1.00 41.14 C
ATOM 10 O3' G B 109 19.799 12.852 6.042 1.00 39.61 O
ATOM 11 C2' G B 109 21.314 11.895 7.761 1.00 42.57 C
ATOM 12 O2' G B 109 21.848 13.210 7.770 1.00 42.58 O
ATOM 13 C1' G B 109 20.911 11.482 9.186 1.00 43.93 C
ATOM 14 N9 G B 109 21.269 10.127 9.641 1.00 45.37 N
ATOM 15 C8 G B 109 21.728 9.827 10.904 1.00 46.03 C
ATOM 16 N7 G B 109 21.974 8.560 11.091 1.00 46.38 N
ATOM 17 C5 G B 109 21.657 7.968 9.874 1.00 46.10 C
ATOM 18 C6 G B 109 21.726 6.603 9.486 1.00 46.14 C
ATOM 19 O6 G B 109 22.094 5.637 10.169 1.00 45.58 O
ATOM 20 N1 G B 109 21.319 6.406 8.165 1.00 46.20 N
ATOM 21 C2 G B 109 20.893 7.415 7.326 1.00 46.37 C
ATOM 22 N2 G B 109 20.535 7.050 6.085 1.00 46.39 N
ATOM 23 N3 G B 109 20.825 8.697 7.680 1.00 45.99 N
ATOM 24 C4 G B 109 21.218 8.913 8.966 1.00 45.85 C
ATOM 25 P C B 110 18.917 12.662 4.714 1.00 38.11 P
ATOM 26 OP1 C B 110 17.499 12.500 5.119 1.00 38.40 O
ATOM 27 OP2 C B 110 19.578 11.635 3.872 1.00 38.05 O
ATOM 28 O5' C B 110 19.043 14.095 4.013 1.00 35.30 O
TER

Atoms:
OP1: (25.631,11.973,11.828)
OP2: (24.840,10.893,13.987)
C3': (27.369,6.852,11.778)
C1': (25.745,7.072,10.108)
C5': (25.979,8.428,13.264)
O4': (25.065,7.193,11.346)
C8: (24.988,9.293,9.158)
O2': (28.056,7.005,9.409)
C6: (23.771,8.641,5.935)
C5: (24.289,8.745,7.241)
C4: (24.717,7.568,7.835)
P: (25.891,11.058,12.957)
C4': (26.026,7.145,12.440)
C2': (27.180,7.485,10.405)
C2: (24.177,6.354,6.052)
N1: (23.727,7.413,5.360)
N3: (24.688,6.331,7.289)
N6: (23.323,9.702,5.259)
N7: (24.465,9.829,8.084)
N9: (25.164,7.936,9.084)
O5': (26.270,9.586,12.456)
O3': (27.608,5.439,11.703)
OP1: (15.518,9.270,6.943)
OP2: (14.521,9.996,9.191)
C3': (20.015,11.766,6.951)
C1': (20.911,11.482,9.186)
C5': (17.911,10.620,7.782)
O6: (22.094,5.637,10.169)
O4': (19.507,11.624,9.298)
C8: (21.728,9.827,10.904)
C2: (20.893,7.415,7.326)
C6: (21.726,6.603,9.486)
C5: (21.657,7.968,9.874)
C4: (21.218,8.913,8.966)
P: (15.323,10.306,7.985)
C4': (18.898,11.752,7.988)
C2': (21.314,11.895,7.761)
O2': (21.848,13.210,7.770)
N1: (21.319,6.406,8.165)
N2: (20.535,7.050,6.085)
N3: (20.825,8.697,7.680)
N7: (21.974,8.560,11.091)
N9: (21.269,10.127,9.641)
O5': (16.728,10.837,8.532)
O3': (19.799,12.852,6.042)
Image (generated by PyMOL):
PyMOL image
show in jmol