Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02453:02043
Extra
PDB:
ATOM 1 O3' G A2452 62.895 134.794 105.363 1.00 31.93 O
ATOM 2 P A A2453 61.480 134.311 104.782 1.00 32.42 P
ATOM 3 OP1 A A2453 60.685 133.764 105.889 1.00 31.40 O
ATOM 4 OP2 A A2453 61.731 133.484 103.596 1.00 35.35 O
ATOM 5 O5' A A2453 60.796 135.657 104.281 1.00 36.18 O
ATOM 6 C5' A A2453 61.465 136.507 103.325 1.00 37.68 C
ATOM 7 C4' A A2453 60.462 137.259 102.477 1.00 37.87 C
ATOM 8 O4' A A2453 59.565 136.316 101.845 1.00 38.82 O
ATOM 9 C3' A A2453 59.517 138.200 103.192 1.00 38.19 C
ATOM 10 O3' A A2453 60.120 139.450 103.432 1.00 40.66 O
ATOM 11 C2' A A2453 58.400 138.343 102.179 1.00 38.36 C
ATOM 12 O2' A A2453 58.778 139.180 101.105 1.00 40.33 O
ATOM 13 C1' A A2453 58.292 136.913 101.666 1.00 37.80 C
ATOM 14 N9 A A2453 57.313 136.131 102.412 1.00 37.55 N
ATOM 15 C8 A A2453 57.540 135.327 103.496 1.00 40.26 C
ATOM 16 N7 A A2453 56.465 134.744 103.955 1.00 40.97 N
ATOM 17 C5 A A2453 55.457 135.197 103.118 1.00 39.00 C
ATOM 18 C6 A A2453 54.079 134.938 103.074 1.00 37.89 C
ATOM 19 N6 A A2453 53.451 134.115 103.916 1.00 36.26 N
ATOM 20 N1 A A2453 53.359 135.555 102.116 1.00 38.93 N
ATOM 21 C2 A A2453 53.991 136.364 101.260 1.00 39.22 C
ATOM 22 N3 A A2453 55.280 136.677 101.195 1.00 39.94 N
ATOM 23 C4 A A2453 55.967 136.054 102.164 1.00 38.22 C
ATOM 24 P G A2454 60.280 139.958 104.936 1.00 42.23 P
ATOM 25 OP1 G A2454 58.927 139.968 105.557 1.00 42.16 O
ATOM 26 OP2 G A2454 61.072 141.210 104.892 1.00 39.92 O
ATOM 27 O5' G A2454 61.155 138.787 105.568 1.00 40.20 O
TER
ATOM 1 O3' A B2042 54.194 126.893 101.480 1.00 32.21 O
ATOM 2 P G B2043 55.179 127.625 100.456 1.00 34.61 P
ATOM 3 OP1 G B2043 55.324 126.800 99.237 1.00 34.15 O
ATOM 4 OP2 G B2043 56.381 128.044 101.206 1.00 35.60 O
ATOM 5 O5' G B2043 54.348 128.926 100.076 1.00 36.37 O
ATOM 6 C5' G B2043 52.897 128.883 100.048 1.00 37.64 C
ATOM 7 C4' G B2043 52.335 130.222 99.652 1.00 36.07 C
ATOM 8 O4' G B2043 52.713 131.200 100.651 1.00 35.41 O
ATOM 9 C3' G B2043 52.858 130.784 98.339 1.00 35.87 C
ATOM 10 O3' G B2043 52.112 130.281 97.231 1.00 38.25 O
ATOM 11 C2' G B2043 52.649 132.274 98.537 1.00 37.13 C
ATOM 12 O2' G B2043 51.300 132.649 98.353 1.00 40.75 O
ATOM 13 C1' G B2043 53.008 132.432 100.020 1.00 36.30 C
ATOM 14 N9 G B2043 54.424 132.719 100.229 1.00 35.41 N
ATOM 15 C8 G B2043 55.296 132.077 101.082 1.00 35.53 C
ATOM 16 N7 G B2043 56.516 132.538 101.008 1.00 33.20 N
ATOM 17 C5 G B2043 56.443 133.547 100.060 1.00 34.19 C
ATOM 18 C6 G B2043 57.448 134.387 99.539 1.00 35.38 C
ATOM 19 O6 G B2043 58.658 134.394 99.796 1.00 37.19 O
ATOM 20 N1 G B2043 56.931 135.279 98.604 1.00 36.11 N
ATOM 21 C2 G B2043 55.620 135.337 98.203 1.00 33.45 C
ATOM 22 N2 G B2043 55.312 136.269 97.294 1.00 32.09 N
ATOM 23 N3 G B2043 54.680 134.541 98.662 1.00 33.68 N
ATOM 24 C4 G B2043 55.155 133.679 99.582 1.00 34.51 C
ATOM 25 P C B2044 52.864 129.871 95.862 1.00 39.37 P
ATOM 26 OP1 C B2044 51.849 129.260 94.982 1.00 36.80 O
ATOM 27 OP2 C B2044 54.109 129.113 96.179 1.00 37.39 O
ATOM 28 O5' C B2044 53.281 131.266 95.225 1.00 37.82 O
TER
ATOM 2 P A A2453 61.480 134.311 104.782 1.00 32.42 P
ATOM 3 OP1 A A2453 60.685 133.764 105.889 1.00 31.40 O
ATOM 4 OP2 A A2453 61.731 133.484 103.596 1.00 35.35 O
ATOM 5 O5' A A2453 60.796 135.657 104.281 1.00 36.18 O
ATOM 6 C5' A A2453 61.465 136.507 103.325 1.00 37.68 C
ATOM 7 C4' A A2453 60.462 137.259 102.477 1.00 37.87 C
ATOM 8 O4' A A2453 59.565 136.316 101.845 1.00 38.82 O
ATOM 9 C3' A A2453 59.517 138.200 103.192 1.00 38.19 C
ATOM 10 O3' A A2453 60.120 139.450 103.432 1.00 40.66 O
ATOM 11 C2' A A2453 58.400 138.343 102.179 1.00 38.36 C
ATOM 12 O2' A A2453 58.778 139.180 101.105 1.00 40.33 O
ATOM 13 C1' A A2453 58.292 136.913 101.666 1.00 37.80 C
ATOM 14 N9 A A2453 57.313 136.131 102.412 1.00 37.55 N
ATOM 15 C8 A A2453 57.540 135.327 103.496 1.00 40.26 C
ATOM 16 N7 A A2453 56.465 134.744 103.955 1.00 40.97 N
ATOM 17 C5 A A2453 55.457 135.197 103.118 1.00 39.00 C
ATOM 18 C6 A A2453 54.079 134.938 103.074 1.00 37.89 C
ATOM 19 N6 A A2453 53.451 134.115 103.916 1.00 36.26 N
ATOM 20 N1 A A2453 53.359 135.555 102.116 1.00 38.93 N
ATOM 21 C2 A A2453 53.991 136.364 101.260 1.00 39.22 C
ATOM 22 N3 A A2453 55.280 136.677 101.195 1.00 39.94 N
ATOM 23 C4 A A2453 55.967 136.054 102.164 1.00 38.22 C
ATOM 24 P G A2454 60.280 139.958 104.936 1.00 42.23 P
ATOM 25 OP1 G A2454 58.927 139.968 105.557 1.00 42.16 O
ATOM 26 OP2 G A2454 61.072 141.210 104.892 1.00 39.92 O
ATOM 27 O5' G A2454 61.155 138.787 105.568 1.00 40.20 O
TER
ATOM 1 O3' A B2042 54.194 126.893 101.480 1.00 32.21 O
ATOM 2 P G B2043 55.179 127.625 100.456 1.00 34.61 P
ATOM 3 OP1 G B2043 55.324 126.800 99.237 1.00 34.15 O
ATOM 4 OP2 G B2043 56.381 128.044 101.206 1.00 35.60 O
ATOM 5 O5' G B2043 54.348 128.926 100.076 1.00 36.37 O
ATOM 6 C5' G B2043 52.897 128.883 100.048 1.00 37.64 C
ATOM 7 C4' G B2043 52.335 130.222 99.652 1.00 36.07 C
ATOM 8 O4' G B2043 52.713 131.200 100.651 1.00 35.41 O
ATOM 9 C3' G B2043 52.858 130.784 98.339 1.00 35.87 C
ATOM 10 O3' G B2043 52.112 130.281 97.231 1.00 38.25 O
ATOM 11 C2' G B2043 52.649 132.274 98.537 1.00 37.13 C
ATOM 12 O2' G B2043 51.300 132.649 98.353 1.00 40.75 O
ATOM 13 C1' G B2043 53.008 132.432 100.020 1.00 36.30 C
ATOM 14 N9 G B2043 54.424 132.719 100.229 1.00 35.41 N
ATOM 15 C8 G B2043 55.296 132.077 101.082 1.00 35.53 C
ATOM 16 N7 G B2043 56.516 132.538 101.008 1.00 33.20 N
ATOM 17 C5 G B2043 56.443 133.547 100.060 1.00 34.19 C
ATOM 18 C6 G B2043 57.448 134.387 99.539 1.00 35.38 C
ATOM 19 O6 G B2043 58.658 134.394 99.796 1.00 37.19 O
ATOM 20 N1 G B2043 56.931 135.279 98.604 1.00 36.11 N
ATOM 21 C2 G B2043 55.620 135.337 98.203 1.00 33.45 C
ATOM 22 N2 G B2043 55.312 136.269 97.294 1.00 32.09 N
ATOM 23 N3 G B2043 54.680 134.541 98.662 1.00 33.68 N
ATOM 24 C4 G B2043 55.155 133.679 99.582 1.00 34.51 C
ATOM 25 P C B2044 52.864 129.871 95.862 1.00 39.37 P
ATOM 26 OP1 C B2044 51.849 129.260 94.982 1.00 36.80 O
ATOM 27 OP2 C B2044 54.109 129.113 96.179 1.00 37.39 O
ATOM 28 O5' C B2044 53.281 131.266 95.225 1.00 37.82 O
TER
Atoms:
OP1: (60.685,133.764,105.889)
OP2: (61.731,133.484,103.596)
C3': (59.517,138.200,103.192)
C1': (58.292,136.913,101.666)
C5': (61.465,136.507,103.325)
O4': (59.565,136.316,101.845)
C8: (57.540,135.327,103.496)
O2': (58.778,139.180,101.105)
C6: (54.079,134.938,103.074)
C5: (55.457,135.197,103.118)
C4: (55.967,136.054,102.164)
P: (61.480,134.311,104.782)
C4': (60.462,137.259,102.477)
C2': (58.400,138.343,102.179)
C2: (53.991,136.364,101.260)
N1: (53.359,135.555,102.116)
N3: (55.280,136.677,101.195)
N6: (53.451,134.115,103.916)
N7: (56.465,134.744,103.955)
N9: (57.313,136.131,102.412)
O5': (60.796,135.657,104.281)
O3': (60.120,139.450,103.432)
OP2: (61.731,133.484,103.596)
C3': (59.517,138.200,103.192)
C1': (58.292,136.913,101.666)
C5': (61.465,136.507,103.325)
O4': (59.565,136.316,101.845)
C8: (57.540,135.327,103.496)
O2': (58.778,139.180,101.105)
C6: (54.079,134.938,103.074)
C5: (55.457,135.197,103.118)
C4: (55.967,136.054,102.164)
P: (61.480,134.311,104.782)
C4': (60.462,137.259,102.477)
C2': (58.400,138.343,102.179)
C2: (53.991,136.364,101.260)
N1: (53.359,135.555,102.116)
N3: (55.280,136.677,101.195)
N6: (53.451,134.115,103.916)
N7: (56.465,134.744,103.955)
N9: (57.313,136.131,102.412)
O5': (60.796,135.657,104.281)
O3': (60.120,139.450,103.432)
OP1: (55.324,126.800,99.237)
OP2: (56.381,128.044,101.206)
C3': (52.858,130.784,98.339)
C1': (53.008,132.432,100.020)
C5': (52.897,128.883,100.048)
O6: (58.658,134.394,99.796)
O4': (52.713,131.200,100.651)
C8: (55.296,132.077,101.082)
C2: (55.620,135.337,98.203)
C6: (57.448,134.387,99.539)
C5: (56.443,133.547,100.060)
C4: (55.155,133.679,99.582)
P: (55.179,127.625,100.456)
C4': (52.335,130.222,99.652)
C2': (52.649,132.274,98.537)
O2': (51.300,132.649,98.353)
N1: (56.931,135.279,98.604)
N2: (55.312,136.269,97.294)
N3: (54.680,134.541,98.662)
N7: (56.516,132.538,101.008)
N9: (54.424,132.719,100.229)
O5': (54.348,128.926,100.076)
O3': (52.112,130.281,97.231)
OP2: (56.381,128.044,101.206)
C3': (52.858,130.784,98.339)
C1': (53.008,132.432,100.020)
C5': (52.897,128.883,100.048)
O6: (58.658,134.394,99.796)
O4': (52.713,131.200,100.651)
C8: (55.296,132.077,101.082)
C2: (55.620,135.337,98.203)
C6: (57.448,134.387,99.539)
C5: (56.443,133.547,100.060)
C4: (55.155,133.679,99.582)
P: (55.179,127.625,100.456)
C4': (52.335,130.222,99.652)
C2': (52.649,132.274,98.537)
O2': (51.300,132.649,98.353)
N1: (56.931,135.279,98.604)
N2: (55.312,136.269,97.294)
N3: (54.680,134.541,98.662)
N7: (56.516,132.538,101.008)
N9: (54.424,132.719,100.229)
O5': (54.348,128.926,100.076)
O3': (52.112,130.281,97.231)
Image (generated by PyMOL):