ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2H1M:B2:A14

Extra

PDB:
ATOM 1 O3' C A 1 -27.198 27.752 13.977 1.00 22.12 O
ATOM 2 P A A 2 -26.803 28.189 12.495 1.00 23.49 P
ATOM 3 OP1 A A 2 -28.007 27.994 11.657 1.00 23.64 O
ATOM 4 OP2 A A 2 -25.533 27.528 12.113 1.00 23.52 O
ATOM 5 O5' A A 2 -26.504 29.751 12.667 1.00 24.10 O
ATOM 6 C5' A A 2 -27.579 30.651 12.902 1.00 25.16 C
ATOM 7 C4' A A 2 -27.074 32.064 13.108 1.00 25.90 C
ATOM 8 O4' A A 2 -26.295 32.134 14.328 1.00 26.06 O
ATOM 9 C3' A A 2 -26.111 32.585 12.056 1.00 26.30 C
ATOM 10 O3' A A 2 -26.800 33.010 10.904 1.00 27.00 O
ATOM 11 C2' A A 2 -25.483 33.742 12.812 1.00 26.26 C
ATOM 12 O2' A A 2 -26.376 34.827 12.972 1.00 26.49 O
ATOM 13 C1' A A 2 -25.236 33.058 14.151 1.00 26.18 C
ATOM 14 N9 A A 2 -23.961 32.343 14.213 1.00 26.12 N
ATOM 15 C8 A A 2 -23.759 30.995 14.104 1.00 26.20 C
ATOM 16 N7 A A 2 -22.502 30.635 14.199 1.00 26.26 N
ATOM 17 C5 A A 2 -21.831 31.829 14.384 1.00 25.98 C
ATOM 18 C6 A A 2 -20.466 32.135 14.556 1.00 25.96 C
ATOM 19 N6 A A 2 -19.506 31.208 14.567 1.00 25.97 N
ATOM 20 N1 A A 2 -20.121 33.434 14.716 1.00 26.22 N
ATOM 21 C2 A A 2 -21.087 34.364 14.706 1.00 26.21 C
ATOM 22 N3 A A 2 -22.405 34.194 14.553 1.00 26.21 N
ATOM 23 C4 A A 2 -22.714 32.893 14.394 1.00 26.09 C
TER

ATOM 1 O3' U B 13 -14.799 39.249 18.847 1.00 27.42 O
ATOM 2 P G B 14 -15.331 38.786 20.283 1.00 26.96 P
ATOM 3 OP1 G B 14 -14.728 39.674 21.301 1.00 26.91 O
ATOM 4 OP2 G B 14 -15.188 37.314 20.420 1.00 26.61 O
ATOM 5 O5' G B 14 -16.875 39.159 20.141 1.00 26.20 O
ATOM 6 C5' G B 14 -17.814 38.418 20.854 1.00 25.30 C
ATOM 7 C4' G B 14 -19.195 38.619 20.286 1.00 24.59 C
ATOM 8 O4' G B 14 -19.233 38.246 18.890 1.00 24.63 O
ATOM 9 C3' G B 14 -20.190 37.707 20.964 1.00 24.45 C
ATOM 10 O3' G B 14 -20.692 38.372 22.097 1.00 24.08 O
ATOM 11 C2' G B 14 -21.212 37.434 19.871 1.00 24.70 C
ATOM 12 O2' G B 14 -22.126 38.492 19.671 1.00 25.26 O
ATOM 13 C1' G B 14 -20.269 37.301 18.677 1.00 24.97 C
ATOM 14 N9 G B 14 -19.678 35.966 18.538 1.00 25.05 N
ATOM 15 C8 G B 14 -18.347 35.632 18.645 1.00 25.12 C
ATOM 16 N7 G B 14 -18.104 34.363 18.476 1.00 25.19 N
ATOM 17 C5 G B 14 -19.351 33.808 18.239 1.00 25.11 C
ATOM 18 C6 G B 14 -19.714 32.461 17.982 1.00 25.13 C
ATOM 19 O6 G B 14 -18.978 31.465 17.917 1.00 24.98 O
ATOM 20 N1 G B 14 -21.091 32.324 17.798 1.00 25.15 N
ATOM 21 C2 G B 14 -21.996 33.361 17.853 1.00 25.10 C
ATOM 22 N2 G B 14 -23.281 33.048 17.646 1.00 25.17 N
ATOM 23 N3 G B 14 -21.665 34.625 18.089 1.00 25.00 N
ATOM 24 C4 G B 14 -20.331 34.780 18.273 1.00 25.02 C
ATOM 25 P C B 15 -20.342 37.761 23.533 1.00 23.86 P
ATOM 26 OP1 C B 15 -20.591 38.797 24.558 1.00 23.54 O
ATOM 27 OP2 C B 15 -19.036 37.063 23.485 1.00 23.52 O
ATOM 28 O5' C B 15 -21.478 36.651 23.648 1.00 24.00 O
TER

Atoms:
OP1: (-28.007,27.994,11.657)
OP2: (-25.533,27.528,12.113)
C3': (-26.111,32.585,12.056)
C1': (-25.236,33.058,14.151)
C5': (-27.579,30.651,12.902)
O4': (-26.295,32.134,14.328)
C8: (-23.759,30.995,14.104)
O2': (-26.376,34.827,12.972)
C6: (-20.466,32.135,14.556)
C5: (-21.831,31.829,14.384)
C4: (-22.714,32.893,14.394)
P: (-26.803,28.189,12.495)
C4': (-27.074,32.064,13.108)
C2': (-25.483,33.742,12.812)
C2: (-21.087,34.364,14.706)
N1: (-20.121,33.434,14.716)
N3: (-22.405,34.194,14.553)
N6: (-19.506,31.208,14.567)
N7: (-22.502,30.635,14.199)
N9: (-23.961,32.343,14.213)
O5': (-26.504,29.751,12.667)
O3': (-26.800,33.010,10.904)
OP1: (-14.728,39.674,21.301)
OP2: (-15.188,37.314,20.420)
C3': (-20.190,37.707,20.964)
C1': (-20.269,37.301,18.677)
C5': (-17.814,38.418,20.854)
O6: (-18.978,31.465,17.917)
O4': (-19.233,38.246,18.890)
C8: (-18.347,35.632,18.645)
C2: (-21.996,33.361,17.853)
C6: (-19.714,32.461,17.982)
C5: (-19.351,33.808,18.239)
C4: (-20.331,34.780,18.273)
P: (-15.331,38.786,20.283)
C4': (-19.195,38.619,20.286)
C2': (-21.212,37.434,19.871)
O2': (-22.126,38.492,19.671)
N1: (-21.091,32.324,17.798)
N2: (-23.281,33.048,17.646)
N3: (-21.665,34.625,18.089)
N7: (-18.104,34.363,18.476)
N9: (-19.678,35.966,18.538)
O5': (-16.875,39.159,20.141)
O3': (-20.692,38.372,22.097)
Image (generated by PyMOL):
PyMOL image
show in jmol