Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NJ7:F3:E7
Extra
PDB:
ATOM 1 O3' C A 2 -11.575 -32.438 3.429 1.00 30.88 O
ATOM 2 P A A 3 -10.798 -32.449 4.830 1.00 37.20 P
ATOM 3 OP1 A A 3 -11.769 -32.907 5.844 1.00 39.42 O
ATOM 4 OP2 A A 3 -10.092 -31.155 4.978 1.00 33.55 O
ATOM 5 O5' A A 3 -9.707 -33.607 4.690 1.00 28.57 O
ATOM 6 C5' A A 3 -10.123 -34.959 4.763 1.00 29.19 C
ATOM 7 C4' A A 3 -8.949 -35.853 4.466 1.00 28.37 C
ATOM 8 O4' A A 3 -8.328 -35.445 3.219 1.00 27.85 O
ATOM 9 C3' A A 3 -7.833 -35.732 5.484 1.00 31.25 C
ATOM 10 O3' A A 3 -8.164 -36.502 6.637 1.00 31.27 O
ATOM 11 C2' A A 3 -6.686 -36.333 4.688 1.00 32.13 C
ATOM 12 O2' A A 3 -6.781 -37.741 4.601 1.00 35.53 O
ATOM 13 C1' A A 3 -6.932 -35.685 3.328 1.00 29.31 C
ATOM 14 N9 A A 3 -6.223 -34.419 3.212 1.00 28.45 N
ATOM 15 C8 A A 3 -6.725 -33.151 3.317 1.00 29.41 C
ATOM 16 N7 A A 3 -5.814 -32.213 3.169 1.00 30.30 N
ATOM 17 C5 A A 3 -4.640 -32.917 2.963 1.00 27.91 C
ATOM 18 C6 A A 3 -3.311 -32.511 2.739 1.00 24.69 C
ATOM 19 N6 A A 3 -2.913 -31.234 2.684 1.00 20.38 N
ATOM 20 N1 A A 3 -2.398 -33.486 2.572 1.00 26.91 N
ATOM 21 C2 A A 3 -2.778 -34.767 2.624 1.00 27.34 C
ATOM 22 N3 A A 3 -3.989 -35.274 2.830 1.00 27.02 N
ATOM 23 C4 A A 3 -4.877 -34.280 2.992 1.00 28.70 C
ATOM 24 P G A 4 -7.253 -36.350 7.933 1.00 38.97 P
ATOM 25 OP1 G A 4 -7.719 -37.271 8.993 1.00 41.45 O
ATOM 26 OP2 G A 4 -7.156 -34.891 8.196 1.00 32.10 O
ATOM 27 O5' G A 4 -5.884 -36.959 7.375 1.00 40.15 O
TER
ATOM 1 O3' A B 6 4.529 -37.713 -1.951 1.00 30.69 O
ATOM 2 P G B 7 3.618 -37.441 -3.232 1.00 29.72 P
ATOM 3 OP1 G B 7 4.114 -38.309 -4.328 1.00 30.15 O
ATOM 4 OP2 G B 7 3.487 -35.984 -3.445 1.00 28.63 O
ATOM 5 O5' G B 7 2.176 -37.967 -2.775 1.00 25.27 O
ATOM 6 C5' G B 7 1.925 -39.349 -2.605 1.00 26.69 C
ATOM 7 C4' G B 7 0.455 -39.575 -2.315 1.00 24.07 C
ATOM 8 O4' G B 7 0.073 -38.912 -1.079 1.00 22.62 O
ATOM 9 C3' G B 7 -0.496 -38.977 -3.333 1.00 22.67 C
ATOM 10 O3' G B 7 -0.523 -39.810 -4.472 1.00 26.52 O
ATOM 11 C2' G B 7 -1.778 -39.092 -2.525 1.00 24.56 C
ATOM 12 O2' G B 7 -2.189 -40.435 -2.336 1.00 23.32 O
ATOM 13 C1' G B 7 -1.289 -38.520 -1.198 1.00 23.05 C
ATOM 14 N9 G B 7 -1.380 -37.070 -1.136 1.00 23.19 N
ATOM 15 C8 G B 7 -0.348 -36.176 -1.279 1.00 23.40 C
ATOM 16 N7 G B 7 -0.725 -34.929 -1.172 1.00 24.79 N
ATOM 17 C5 G B 7 -2.094 -35.004 -0.946 1.00 25.54 C
ATOM 18 C6 G B 7 -3.046 -33.968 -0.752 1.00 23.27 C
ATOM 19 O6 G B 7 -2.856 -32.744 -0.733 1.00 23.55 O
ATOM 20 N1 G B 7 -4.325 -34.462 -0.553 1.00 20.06 N
ATOM 21 C2 G B 7 -4.658 -35.800 -0.550 1.00 22.65 C
ATOM 22 N2 G B 7 -5.959 -36.079 -0.351 1.00 20.86 N
ATOM 23 N3 G B 7 -3.776 -36.784 -0.726 1.00 22.82 N
ATOM 24 C4 G B 7 -2.515 -36.317 -0.919 1.00 25.32 C
ATOM 25 P C B 8 -0.844 -39.266 -5.937 1.00 26.34 P
ATOM 26 OP1 C B 8 -0.647 -40.416 -6.840 1.00 26.84 O
ATOM 27 OP2 C B 8 -0.110 -38.013 -6.187 1.00 28.14 O
ATOM 28 O5' C B 8 -2.408 -38.893 -5.842 1.00 20.68 O
TER
ATOM 2 P A A 3 -10.798 -32.449 4.830 1.00 37.20 P
ATOM 3 OP1 A A 3 -11.769 -32.907 5.844 1.00 39.42 O
ATOM 4 OP2 A A 3 -10.092 -31.155 4.978 1.00 33.55 O
ATOM 5 O5' A A 3 -9.707 -33.607 4.690 1.00 28.57 O
ATOM 6 C5' A A 3 -10.123 -34.959 4.763 1.00 29.19 C
ATOM 7 C4' A A 3 -8.949 -35.853 4.466 1.00 28.37 C
ATOM 8 O4' A A 3 -8.328 -35.445 3.219 1.00 27.85 O
ATOM 9 C3' A A 3 -7.833 -35.732 5.484 1.00 31.25 C
ATOM 10 O3' A A 3 -8.164 -36.502 6.637 1.00 31.27 O
ATOM 11 C2' A A 3 -6.686 -36.333 4.688 1.00 32.13 C
ATOM 12 O2' A A 3 -6.781 -37.741 4.601 1.00 35.53 O
ATOM 13 C1' A A 3 -6.932 -35.685 3.328 1.00 29.31 C
ATOM 14 N9 A A 3 -6.223 -34.419 3.212 1.00 28.45 N
ATOM 15 C8 A A 3 -6.725 -33.151 3.317 1.00 29.41 C
ATOM 16 N7 A A 3 -5.814 -32.213 3.169 1.00 30.30 N
ATOM 17 C5 A A 3 -4.640 -32.917 2.963 1.00 27.91 C
ATOM 18 C6 A A 3 -3.311 -32.511 2.739 1.00 24.69 C
ATOM 19 N6 A A 3 -2.913 -31.234 2.684 1.00 20.38 N
ATOM 20 N1 A A 3 -2.398 -33.486 2.572 1.00 26.91 N
ATOM 21 C2 A A 3 -2.778 -34.767 2.624 1.00 27.34 C
ATOM 22 N3 A A 3 -3.989 -35.274 2.830 1.00 27.02 N
ATOM 23 C4 A A 3 -4.877 -34.280 2.992 1.00 28.70 C
ATOM 24 P G A 4 -7.253 -36.350 7.933 1.00 38.97 P
ATOM 25 OP1 G A 4 -7.719 -37.271 8.993 1.00 41.45 O
ATOM 26 OP2 G A 4 -7.156 -34.891 8.196 1.00 32.10 O
ATOM 27 O5' G A 4 -5.884 -36.959 7.375 1.00 40.15 O
TER
ATOM 1 O3' A B 6 4.529 -37.713 -1.951 1.00 30.69 O
ATOM 2 P G B 7 3.618 -37.441 -3.232 1.00 29.72 P
ATOM 3 OP1 G B 7 4.114 -38.309 -4.328 1.00 30.15 O
ATOM 4 OP2 G B 7 3.487 -35.984 -3.445 1.00 28.63 O
ATOM 5 O5' G B 7 2.176 -37.967 -2.775 1.00 25.27 O
ATOM 6 C5' G B 7 1.925 -39.349 -2.605 1.00 26.69 C
ATOM 7 C4' G B 7 0.455 -39.575 -2.315 1.00 24.07 C
ATOM 8 O4' G B 7 0.073 -38.912 -1.079 1.00 22.62 O
ATOM 9 C3' G B 7 -0.496 -38.977 -3.333 1.00 22.67 C
ATOM 10 O3' G B 7 -0.523 -39.810 -4.472 1.00 26.52 O
ATOM 11 C2' G B 7 -1.778 -39.092 -2.525 1.00 24.56 C
ATOM 12 O2' G B 7 -2.189 -40.435 -2.336 1.00 23.32 O
ATOM 13 C1' G B 7 -1.289 -38.520 -1.198 1.00 23.05 C
ATOM 14 N9 G B 7 -1.380 -37.070 -1.136 1.00 23.19 N
ATOM 15 C8 G B 7 -0.348 -36.176 -1.279 1.00 23.40 C
ATOM 16 N7 G B 7 -0.725 -34.929 -1.172 1.00 24.79 N
ATOM 17 C5 G B 7 -2.094 -35.004 -0.946 1.00 25.54 C
ATOM 18 C6 G B 7 -3.046 -33.968 -0.752 1.00 23.27 C
ATOM 19 O6 G B 7 -2.856 -32.744 -0.733 1.00 23.55 O
ATOM 20 N1 G B 7 -4.325 -34.462 -0.553 1.00 20.06 N
ATOM 21 C2 G B 7 -4.658 -35.800 -0.550 1.00 22.65 C
ATOM 22 N2 G B 7 -5.959 -36.079 -0.351 1.00 20.86 N
ATOM 23 N3 G B 7 -3.776 -36.784 -0.726 1.00 22.82 N
ATOM 24 C4 G B 7 -2.515 -36.317 -0.919 1.00 25.32 C
ATOM 25 P C B 8 -0.844 -39.266 -5.937 1.00 26.34 P
ATOM 26 OP1 C B 8 -0.647 -40.416 -6.840 1.00 26.84 O
ATOM 27 OP2 C B 8 -0.110 -38.013 -6.187 1.00 28.14 O
ATOM 28 O5' C B 8 -2.408 -38.893 -5.842 1.00 20.68 O
TER
Atoms:
OP1: (-11.769,-32.907,5.844)
OP2: (-10.092,-31.155,4.978)
C3': (-7.833,-35.732,5.484)
C1': (-6.932,-35.685,3.328)
C5': (-10.123,-34.959,4.763)
O4': (-8.328,-35.445,3.219)
C8: (-6.725,-33.151,3.317)
O2': (-6.781,-37.741,4.601)
C6: (-3.311,-32.511,2.739)
C5: (-4.640,-32.917,2.963)
C4: (-4.877,-34.280,2.992)
P: (-10.798,-32.449,4.830)
C4': (-8.949,-35.853,4.466)
C2': (-6.686,-36.333,4.688)
C2: (-2.778,-34.767,2.624)
N1: (-2.398,-33.486,2.572)
N3: (-3.989,-35.274,2.830)
N6: (-2.913,-31.234,2.684)
N7: (-5.814,-32.213,3.169)
N9: (-6.223,-34.419,3.212)
O5': (-9.707,-33.607,4.690)
O3': (-8.164,-36.502,6.637)
OP2: (-10.092,-31.155,4.978)
C3': (-7.833,-35.732,5.484)
C1': (-6.932,-35.685,3.328)
C5': (-10.123,-34.959,4.763)
O4': (-8.328,-35.445,3.219)
C8: (-6.725,-33.151,3.317)
O2': (-6.781,-37.741,4.601)
C6: (-3.311,-32.511,2.739)
C5: (-4.640,-32.917,2.963)
C4: (-4.877,-34.280,2.992)
P: (-10.798,-32.449,4.830)
C4': (-8.949,-35.853,4.466)
C2': (-6.686,-36.333,4.688)
C2: (-2.778,-34.767,2.624)
N1: (-2.398,-33.486,2.572)
N3: (-3.989,-35.274,2.830)
N6: (-2.913,-31.234,2.684)
N7: (-5.814,-32.213,3.169)
N9: (-6.223,-34.419,3.212)
O5': (-9.707,-33.607,4.690)
O3': (-8.164,-36.502,6.637)
OP1: (4.114,-38.309,-4.328)
OP2: (3.487,-35.984,-3.445)
C3': (-0.496,-38.977,-3.333)
C1': (-1.289,-38.520,-1.198)
C5': (1.925,-39.349,-2.605)
O6: (-2.856,-32.744,-0.733)
O4': (0.073,-38.912,-1.079)
C8: (-0.348,-36.176,-1.279)
C2: (-4.658,-35.800,-0.550)
C6: (-3.046,-33.968,-0.752)
C5: (-2.094,-35.004,-0.946)
C4: (-2.515,-36.317,-0.919)
P: (3.618,-37.441,-3.232)
C4': (0.455,-39.575,-2.315)
C2': (-1.778,-39.092,-2.525)
O2': (-2.189,-40.435,-2.336)
N1: (-4.325,-34.462,-0.553)
N2: (-5.959,-36.079,-0.351)
N3: (-3.776,-36.784,-0.726)
N7: (-0.725,-34.929,-1.172)
N9: (-1.380,-37.070,-1.136)
O5': (2.176,-37.967,-2.775)
O3': (-0.523,-39.810,-4.472)
OP2: (3.487,-35.984,-3.445)
C3': (-0.496,-38.977,-3.333)
C1': (-1.289,-38.520,-1.198)
C5': (1.925,-39.349,-2.605)
O6: (-2.856,-32.744,-0.733)
O4': (0.073,-38.912,-1.079)
C8: (-0.348,-36.176,-1.279)
C2: (-4.658,-35.800,-0.550)
C6: (-3.046,-33.968,-0.752)
C5: (-2.094,-35.004,-0.946)
C4: (-2.515,-36.317,-0.919)
P: (3.618,-37.441,-3.232)
C4': (0.455,-39.575,-2.315)
C2': (-1.778,-39.092,-2.525)
O2': (-2.189,-40.435,-2.336)
N1: (-4.325,-34.462,-0.553)
N2: (-5.959,-36.079,-0.351)
N3: (-3.776,-36.784,-0.726)
N7: (-0.725,-34.929,-1.172)
N9: (-1.380,-37.070,-1.136)
O5': (2.176,-37.967,-2.775)
O3': (-0.523,-39.810,-4.472)
Image (generated by PyMOL):