Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:V8:V45
Extra
PDB:
ATOM 1 O3' U A 7 -117.703 -6.430 28.791 1.00 56.87 O
ATOM 2 P A A 8 -117.345 -6.346 27.219 1.00 73.91 P
ATOM 3 OP1 A A 8 -117.543 -7.707 26.653 1.00 73.91 O
ATOM 4 OP2 A A 8 -116.003 -5.715 27.109 1.00 73.91 O
ATOM 5 O5' A A 8 -118.456 -5.354 26.639 1.00 73.91 O
ATOM 6 C5' A A 8 -119.803 -5.787 26.443 1.00 73.91 C
ATOM 7 C4' A A 8 -120.418 -5.202 25.187 1.00 73.91 C
ATOM 8 O4' A A 8 -120.398 -3.751 25.267 1.00 73.91 O
ATOM 9 C3' A A 8 -119.718 -5.562 23.877 1.00 73.91 C
ATOM 10 O3' A A 8 -120.691 -5.718 22.843 1.00 73.91 O
ATOM 11 C2' A A 8 -118.870 -4.327 23.598 1.00 73.91 C
ATOM 12 O2' A A 8 -118.536 -4.133 22.244 1.00 73.91 O
ATOM 13 C1' A A 8 -119.779 -3.224 24.112 1.00 73.91 C
ATOM 14 N9 A A 8 -119.076 -2.000 24.488 1.00 74.08 N
ATOM 15 C8 A A 8 -117.743 -1.864 24.782 1.00 74.08 C
ATOM 16 N7 A A 8 -117.402 -0.635 25.089 1.00 74.08 N
ATOM 17 C5 A A 8 -118.583 0.092 24.990 1.00 74.08 C
ATOM 18 C6 A A 8 -118.884 1.454 25.192 1.00 74.08 C
ATOM 19 N6 A A 8 -117.994 2.380 25.555 1.00 74.08 N
ATOM 20 N1 A A 8 -120.159 1.842 25.009 1.00 74.08 N
ATOM 21 C2 A A 8 -121.060 0.924 24.647 1.00 74.08 C
ATOM 22 N3 A A 8 -120.899 -0.380 24.433 1.00 74.08 N
ATOM 23 C4 A A 8 -119.621 -0.741 24.619 1.00 74.08 C
ATOM 24 P G A 9 -121.399 -7.146 22.594 1.00 88.39 P
ATOM 25 OP1 G A 9 -122.825 -6.878 22.275 1.00 88.39 O
ATOM 26 OP2 G A 9 -121.079 -8.010 23.758 1.00 88.39 O
ATOM 27 O5' G A 9 -120.650 -7.683 21.301 1.00 88.39 O
TER
ATOM 1 O3' U B 44 -126.642 -4.135 23.686 1.00 84.59 O
ATOM 2 P G B 45 -127.453 -3.612 24.982 1.00 85.66 P
ATOM 3 OP1 G B 45 -128.862 -3.381 24.569 1.00 85.66 O
ATOM 4 OP2 G B 45 -126.682 -2.483 25.552 1.00 85.66 O
ATOM 5 O5' G B 45 -127.376 -4.860 25.959 1.00 85.66 O
ATOM 6 C5' G B 45 -126.434 -5.895 25.725 1.00 85.66 C
ATOM 7 C4' G B 45 -125.394 -5.968 26.814 1.00 85.66 C
ATOM 8 O4' G B 45 -124.508 -4.806 26.754 1.00 85.66 O
ATOM 9 C3' G B 45 -125.943 -6.024 28.243 1.00 85.66 C
ATOM 10 O3' G B 45 -125.278 -7.053 28.963 1.00 85.66 O
ATOM 11 C2' G B 45 -125.562 -4.664 28.827 1.00 85.66 C
ATOM 12 O2' G B 45 -125.364 -4.662 30.226 1.00 85.66 O
ATOM 13 C1' G B 45 -124.273 -4.354 28.069 1.00 85.66 C
ATOM 14 N9 G B 45 -123.914 -2.924 28.049 1.00 85.31 N
ATOM 15 C8 G B 45 -124.817 -1.898 28.204 1.00 85.31 C
ATOM 16 N7 G B 45 -124.280 -0.714 28.212 1.00 85.31 N
ATOM 17 C5 G B 45 -122.923 -0.953 28.083 1.00 85.31 C
ATOM 18 C6 G B 45 -121.856 -0.015 28.035 1.00 85.31 C
ATOM 19 O6 G B 45 -121.929 1.221 28.096 1.00 85.31 O
ATOM 20 N1 G B 45 -120.615 -0.637 27.901 1.00 85.31 N
ATOM 21 C2 G B 45 -120.446 -1.998 27.821 1.00 85.31 C
ATOM 22 N2 G B 45 -119.170 -2.391 27.694 1.00 85.31 N
ATOM 23 N3 G B 45 -121.438 -2.890 27.865 1.00 85.31 N
ATOM 24 C4 G B 45 -122.661 -2.309 27.992 1.00 85.31 C
ATOM 25 P U B 46 -125.518 -8.588 28.566 1.00109.22 P
ATOM 26 OP1 U B 46 -124.811 -8.827 27.283 1.00109.22 O
ATOM 27 OP2 U B 46 -126.981 -8.828 28.628 1.00109.22 O
ATOM 28 O5' U B 46 -124.784 -9.370 29.745 1.00109.22 O
TER
ATOM 2 P A A 8 -117.345 -6.346 27.219 1.00 73.91 P
ATOM 3 OP1 A A 8 -117.543 -7.707 26.653 1.00 73.91 O
ATOM 4 OP2 A A 8 -116.003 -5.715 27.109 1.00 73.91 O
ATOM 5 O5' A A 8 -118.456 -5.354 26.639 1.00 73.91 O
ATOM 6 C5' A A 8 -119.803 -5.787 26.443 1.00 73.91 C
ATOM 7 C4' A A 8 -120.418 -5.202 25.187 1.00 73.91 C
ATOM 8 O4' A A 8 -120.398 -3.751 25.267 1.00 73.91 O
ATOM 9 C3' A A 8 -119.718 -5.562 23.877 1.00 73.91 C
ATOM 10 O3' A A 8 -120.691 -5.718 22.843 1.00 73.91 O
ATOM 11 C2' A A 8 -118.870 -4.327 23.598 1.00 73.91 C
ATOM 12 O2' A A 8 -118.536 -4.133 22.244 1.00 73.91 O
ATOM 13 C1' A A 8 -119.779 -3.224 24.112 1.00 73.91 C
ATOM 14 N9 A A 8 -119.076 -2.000 24.488 1.00 74.08 N
ATOM 15 C8 A A 8 -117.743 -1.864 24.782 1.00 74.08 C
ATOM 16 N7 A A 8 -117.402 -0.635 25.089 1.00 74.08 N
ATOM 17 C5 A A 8 -118.583 0.092 24.990 1.00 74.08 C
ATOM 18 C6 A A 8 -118.884 1.454 25.192 1.00 74.08 C
ATOM 19 N6 A A 8 -117.994 2.380 25.555 1.00 74.08 N
ATOM 20 N1 A A 8 -120.159 1.842 25.009 1.00 74.08 N
ATOM 21 C2 A A 8 -121.060 0.924 24.647 1.00 74.08 C
ATOM 22 N3 A A 8 -120.899 -0.380 24.433 1.00 74.08 N
ATOM 23 C4 A A 8 -119.621 -0.741 24.619 1.00 74.08 C
ATOM 24 P G A 9 -121.399 -7.146 22.594 1.00 88.39 P
ATOM 25 OP1 G A 9 -122.825 -6.878 22.275 1.00 88.39 O
ATOM 26 OP2 G A 9 -121.079 -8.010 23.758 1.00 88.39 O
ATOM 27 O5' G A 9 -120.650 -7.683 21.301 1.00 88.39 O
TER
ATOM 1 O3' U B 44 -126.642 -4.135 23.686 1.00 84.59 O
ATOM 2 P G B 45 -127.453 -3.612 24.982 1.00 85.66 P
ATOM 3 OP1 G B 45 -128.862 -3.381 24.569 1.00 85.66 O
ATOM 4 OP2 G B 45 -126.682 -2.483 25.552 1.00 85.66 O
ATOM 5 O5' G B 45 -127.376 -4.860 25.959 1.00 85.66 O
ATOM 6 C5' G B 45 -126.434 -5.895 25.725 1.00 85.66 C
ATOM 7 C4' G B 45 -125.394 -5.968 26.814 1.00 85.66 C
ATOM 8 O4' G B 45 -124.508 -4.806 26.754 1.00 85.66 O
ATOM 9 C3' G B 45 -125.943 -6.024 28.243 1.00 85.66 C
ATOM 10 O3' G B 45 -125.278 -7.053 28.963 1.00 85.66 O
ATOM 11 C2' G B 45 -125.562 -4.664 28.827 1.00 85.66 C
ATOM 12 O2' G B 45 -125.364 -4.662 30.226 1.00 85.66 O
ATOM 13 C1' G B 45 -124.273 -4.354 28.069 1.00 85.66 C
ATOM 14 N9 G B 45 -123.914 -2.924 28.049 1.00 85.31 N
ATOM 15 C8 G B 45 -124.817 -1.898 28.204 1.00 85.31 C
ATOM 16 N7 G B 45 -124.280 -0.714 28.212 1.00 85.31 N
ATOM 17 C5 G B 45 -122.923 -0.953 28.083 1.00 85.31 C
ATOM 18 C6 G B 45 -121.856 -0.015 28.035 1.00 85.31 C
ATOM 19 O6 G B 45 -121.929 1.221 28.096 1.00 85.31 O
ATOM 20 N1 G B 45 -120.615 -0.637 27.901 1.00 85.31 N
ATOM 21 C2 G B 45 -120.446 -1.998 27.821 1.00 85.31 C
ATOM 22 N2 G B 45 -119.170 -2.391 27.694 1.00 85.31 N
ATOM 23 N3 G B 45 -121.438 -2.890 27.865 1.00 85.31 N
ATOM 24 C4 G B 45 -122.661 -2.309 27.992 1.00 85.31 C
ATOM 25 P U B 46 -125.518 -8.588 28.566 1.00109.22 P
ATOM 26 OP1 U B 46 -124.811 -8.827 27.283 1.00109.22 O
ATOM 27 OP2 U B 46 -126.981 -8.828 28.628 1.00109.22 O
ATOM 28 O5' U B 46 -124.784 -9.370 29.745 1.00109.22 O
TER
Atoms:
OP1: (-117.543,-7.707,26.653)
OP2: (-116.003,-5.715,27.109)
C3': (-119.718,-5.562,23.877)
C1': (-119.779,-3.224,24.112)
C5': (-119.803,-5.787,26.443)
O4': (-120.398,-3.751,25.267)
C8: (-117.743,-1.864,24.782)
O2': (-118.536,-4.133,22.244)
C6: (-118.884,1.454,25.192)
C5: (-118.583,0.092,24.990)
C4: (-119.621,-0.741,24.619)
P: (-117.345,-6.346,27.219)
C4': (-120.418,-5.202,25.187)
C2': (-118.870,-4.327,23.598)
C2: (-121.060,0.924,24.647)
N1: (-120.159,1.842,25.009)
N3: (-120.899,-0.380,24.433)
N6: (-117.994,2.380,25.555)
N7: (-117.402,-0.635,25.089)
N9: (-119.076,-2.000,24.488)
O5': (-118.456,-5.354,26.639)
O3': (-120.691,-5.718,22.843)
OP2: (-116.003,-5.715,27.109)
C3': (-119.718,-5.562,23.877)
C1': (-119.779,-3.224,24.112)
C5': (-119.803,-5.787,26.443)
O4': (-120.398,-3.751,25.267)
C8: (-117.743,-1.864,24.782)
O2': (-118.536,-4.133,22.244)
C6: (-118.884,1.454,25.192)
C5: (-118.583,0.092,24.990)
C4: (-119.621,-0.741,24.619)
P: (-117.345,-6.346,27.219)
C4': (-120.418,-5.202,25.187)
C2': (-118.870,-4.327,23.598)
C2: (-121.060,0.924,24.647)
N1: (-120.159,1.842,25.009)
N3: (-120.899,-0.380,24.433)
N6: (-117.994,2.380,25.555)
N7: (-117.402,-0.635,25.089)
N9: (-119.076,-2.000,24.488)
O5': (-118.456,-5.354,26.639)
O3': (-120.691,-5.718,22.843)
OP1: (-128.862,-3.381,24.569)
OP2: (-126.682,-2.483,25.552)
C3': (-125.943,-6.024,28.243)
C1': (-124.273,-4.354,28.069)
C5': (-126.434,-5.895,25.725)
O6: (-121.929,1.221,28.096)
O4': (-124.508,-4.806,26.754)
C8: (-124.817,-1.898,28.204)
C2: (-120.446,-1.998,27.821)
C6: (-121.856,-0.015,28.035)
C5: (-122.923,-0.953,28.083)
C4: (-122.661,-2.309,27.992)
P: (-127.453,-3.612,24.982)
C4': (-125.394,-5.968,26.814)
C2': (-125.562,-4.664,28.827)
O2': (-125.364,-4.662,30.226)
N1: (-120.615,-0.637,27.901)
N2: (-119.170,-2.391,27.694)
N3: (-121.438,-2.890,27.865)
N7: (-124.280,-0.714,28.212)
N9: (-123.914,-2.924,28.049)
O5': (-127.376,-4.860,25.959)
O3': (-125.278,-7.053,28.963)
OP2: (-126.682,-2.483,25.552)
C3': (-125.943,-6.024,28.243)
C1': (-124.273,-4.354,28.069)
C5': (-126.434,-5.895,25.725)
O6: (-121.929,1.221,28.096)
O4': (-124.508,-4.806,26.754)
C8: (-124.817,-1.898,28.204)
C2: (-120.446,-1.998,27.821)
C6: (-121.856,-0.015,28.035)
C5: (-122.923,-0.953,28.083)
C4: (-122.661,-2.309,27.992)
P: (-127.453,-3.612,24.982)
C4': (-125.394,-5.968,26.814)
C2': (-125.562,-4.664,28.827)
O2': (-125.364,-4.662,30.226)
N1: (-120.615,-0.637,27.901)
N2: (-119.170,-2.391,27.694)
N3: (-121.438,-2.890,27.865)
N7: (-124.280,-0.714,28.212)
N9: (-123.914,-2.924,28.049)
O5': (-127.376,-4.860,25.959)
O3': (-125.278,-7.053,28.963)
Image (generated by PyMOL):