Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A561:A565
Extra
PDB:
ATOM 1 O3' U A 560 -17.841 73.162 82.234 1.00 15.97 O
ATOM 2 P A A 561 -17.327 71.845 81.471 1.00 18.11 P
ATOM 3 OP1 A A 561 -18.480 70.907 81.450 1.00 18.11 O
ATOM 4 OP2 A A 561 -16.062 71.400 82.113 1.00 18.11 O
ATOM 5 O5' A A 561 -17.018 72.391 80.003 1.00 18.11 O
ATOM 6 C5' A A 561 -18.024 72.394 79.018 1.00 18.11 C
ATOM 7 C4' A A 561 -17.574 73.054 77.748 1.00 18.11 C
ATOM 8 O4' A A 561 -18.694 73.723 77.153 1.00 18.11 O
ATOM 9 C3' A A 561 -16.483 74.108 77.877 1.00 18.11 C
ATOM 10 O3' A A 561 -15.197 73.531 77.686 1.00 18.11 O
ATOM 11 C2' A A 561 -16.825 75.152 76.806 1.00 18.11 C
ATOM 12 O2' A A 561 -16.008 74.960 75.656 1.00 18.11 O
ATOM 13 C1' A A 561 -18.280 74.839 76.434 1.00 18.11 C
ATOM 14 N9 A A 561 -19.236 75.924 76.709 1.00 17.99 N
ATOM 15 C8 A A 561 -20.329 76.149 75.896 1.00 17.99 C
ATOM 16 N7 A A 561 -21.164 77.077 76.281 1.00 17.99 N
ATOM 17 C5 A A 561 -20.588 77.457 77.466 1.00 17.99 C
ATOM 18 C6 A A 561 -21.013 78.421 78.361 1.00 17.99 C
ATOM 19 N6 A A 561 -22.111 79.139 78.143 1.00 17.99 N
ATOM 20 N1 A A 561 -20.250 78.610 79.466 1.00 17.99 N
ATOM 21 C2 A A 561 -19.145 77.848 79.635 1.00 17.99 C
ATOM 22 N3 A A 561 -18.637 76.888 78.845 1.00 17.99 N
ATOM 23 C4 A A 561 -19.421 76.749 77.768 1.00 17.99 C
ATOM 24 P C A 562 -13.855 74.264 78.184 1.00 18.49 P
ATOM 25 OP1 C A 562 -13.929 74.352 79.663 1.00 18.49 O
ATOM 26 OP2 C A 562 -13.719 75.515 77.404 1.00 18.49 O
ATOM 27 O5' C A 562 -12.721 73.221 77.752 1.00 18.49 O
TER
ATOM 1 O3' G B 564 -15.747 74.549 72.476 1.00 18.97 O
ATOM 2 P G B 565 -15.288 75.928 71.785 1.00 5.94 P
ATOM 3 OP1 G B 565 -15.103 75.655 70.331 1.00 5.94 O
ATOM 4 OP2 G B 565 -14.130 76.446 72.573 1.00 5.94 O
ATOM 5 O5' G B 565 -16.547 76.875 72.006 1.00 5.94 O
ATOM 6 C5' G B 565 -17.858 76.384 71.830 1.00 5.94 C
ATOM 7 C4' G B 565 -18.890 77.417 72.203 1.00 5.94 C
ATOM 8 O4' G B 565 -19.092 77.430 73.636 1.00 5.94 O
ATOM 9 C3' G B 565 -18.562 78.864 71.870 1.00 5.94 C
ATOM 10 O3' G B 565 -18.769 79.167 70.511 1.00 5.94 O
ATOM 11 C2' G B 565 -19.489 79.633 72.805 1.00 5.94 C
ATOM 12 O2' G B 565 -20.794 79.749 72.242 1.00 5.94 O
ATOM 13 C1' G B 565 -19.541 78.709 74.036 1.00 5.94 C
ATOM 14 N9 G B 565 -18.674 79.175 75.140 1.00 5.71 N
ATOM 15 C8 G B 565 -17.387 78.738 75.310 1.00 5.71 C
ATOM 16 N7 G B 565 -16.809 79.252 76.357 1.00 5.71 N
ATOM 17 C5 G B 565 -17.770 80.077 76.921 1.00 5.71 C
ATOM 18 C6 G B 565 -17.682 80.886 78.077 1.00 5.71 C
ATOM 19 O6 G B 565 -16.726 81.045 78.845 1.00 5.71 O
ATOM 20 N1 G B 565 -18.851 81.554 78.328 1.00 5.71 N
ATOM 21 C2 G B 565 -19.955 81.457 77.550 1.00 5.71 C
ATOM 22 N2 G B 565 -20.980 82.193 77.993 1.00 5.71 N
ATOM 23 N3 G B 565 -20.062 80.725 76.454 1.00 5.71 N
ATOM 24 C4 G B 565 -18.934 80.043 76.197 1.00 5.71 C
ATOM 25 P G B 566 -18.474 80.642 69.950 1.00 18.36 P
ATOM 26 OP1 G B 566 -19.720 81.108 69.247 1.00 18.36 O
ATOM 27 OP2 G B 566 -17.195 80.563 69.189 1.00 18.36 O
ATOM 28 O5' G B 566 -18.247 81.495 71.267 1.00 18.36 O
TER
ATOM 2 P A A 561 -17.327 71.845 81.471 1.00 18.11 P
ATOM 3 OP1 A A 561 -18.480 70.907 81.450 1.00 18.11 O
ATOM 4 OP2 A A 561 -16.062 71.400 82.113 1.00 18.11 O
ATOM 5 O5' A A 561 -17.018 72.391 80.003 1.00 18.11 O
ATOM 6 C5' A A 561 -18.024 72.394 79.018 1.00 18.11 C
ATOM 7 C4' A A 561 -17.574 73.054 77.748 1.00 18.11 C
ATOM 8 O4' A A 561 -18.694 73.723 77.153 1.00 18.11 O
ATOM 9 C3' A A 561 -16.483 74.108 77.877 1.00 18.11 C
ATOM 10 O3' A A 561 -15.197 73.531 77.686 1.00 18.11 O
ATOM 11 C2' A A 561 -16.825 75.152 76.806 1.00 18.11 C
ATOM 12 O2' A A 561 -16.008 74.960 75.656 1.00 18.11 O
ATOM 13 C1' A A 561 -18.280 74.839 76.434 1.00 18.11 C
ATOM 14 N9 A A 561 -19.236 75.924 76.709 1.00 17.99 N
ATOM 15 C8 A A 561 -20.329 76.149 75.896 1.00 17.99 C
ATOM 16 N7 A A 561 -21.164 77.077 76.281 1.00 17.99 N
ATOM 17 C5 A A 561 -20.588 77.457 77.466 1.00 17.99 C
ATOM 18 C6 A A 561 -21.013 78.421 78.361 1.00 17.99 C
ATOM 19 N6 A A 561 -22.111 79.139 78.143 1.00 17.99 N
ATOM 20 N1 A A 561 -20.250 78.610 79.466 1.00 17.99 N
ATOM 21 C2 A A 561 -19.145 77.848 79.635 1.00 17.99 C
ATOM 22 N3 A A 561 -18.637 76.888 78.845 1.00 17.99 N
ATOM 23 C4 A A 561 -19.421 76.749 77.768 1.00 17.99 C
ATOM 24 P C A 562 -13.855 74.264 78.184 1.00 18.49 P
ATOM 25 OP1 C A 562 -13.929 74.352 79.663 1.00 18.49 O
ATOM 26 OP2 C A 562 -13.719 75.515 77.404 1.00 18.49 O
ATOM 27 O5' C A 562 -12.721 73.221 77.752 1.00 18.49 O
TER
ATOM 1 O3' G B 564 -15.747 74.549 72.476 1.00 18.97 O
ATOM 2 P G B 565 -15.288 75.928 71.785 1.00 5.94 P
ATOM 3 OP1 G B 565 -15.103 75.655 70.331 1.00 5.94 O
ATOM 4 OP2 G B 565 -14.130 76.446 72.573 1.00 5.94 O
ATOM 5 O5' G B 565 -16.547 76.875 72.006 1.00 5.94 O
ATOM 6 C5' G B 565 -17.858 76.384 71.830 1.00 5.94 C
ATOM 7 C4' G B 565 -18.890 77.417 72.203 1.00 5.94 C
ATOM 8 O4' G B 565 -19.092 77.430 73.636 1.00 5.94 O
ATOM 9 C3' G B 565 -18.562 78.864 71.870 1.00 5.94 C
ATOM 10 O3' G B 565 -18.769 79.167 70.511 1.00 5.94 O
ATOM 11 C2' G B 565 -19.489 79.633 72.805 1.00 5.94 C
ATOM 12 O2' G B 565 -20.794 79.749 72.242 1.00 5.94 O
ATOM 13 C1' G B 565 -19.541 78.709 74.036 1.00 5.94 C
ATOM 14 N9 G B 565 -18.674 79.175 75.140 1.00 5.71 N
ATOM 15 C8 G B 565 -17.387 78.738 75.310 1.00 5.71 C
ATOM 16 N7 G B 565 -16.809 79.252 76.357 1.00 5.71 N
ATOM 17 C5 G B 565 -17.770 80.077 76.921 1.00 5.71 C
ATOM 18 C6 G B 565 -17.682 80.886 78.077 1.00 5.71 C
ATOM 19 O6 G B 565 -16.726 81.045 78.845 1.00 5.71 O
ATOM 20 N1 G B 565 -18.851 81.554 78.328 1.00 5.71 N
ATOM 21 C2 G B 565 -19.955 81.457 77.550 1.00 5.71 C
ATOM 22 N2 G B 565 -20.980 82.193 77.993 1.00 5.71 N
ATOM 23 N3 G B 565 -20.062 80.725 76.454 1.00 5.71 N
ATOM 24 C4 G B 565 -18.934 80.043 76.197 1.00 5.71 C
ATOM 25 P G B 566 -18.474 80.642 69.950 1.00 18.36 P
ATOM 26 OP1 G B 566 -19.720 81.108 69.247 1.00 18.36 O
ATOM 27 OP2 G B 566 -17.195 80.563 69.189 1.00 18.36 O
ATOM 28 O5' G B 566 -18.247 81.495 71.267 1.00 18.36 O
TER
Atoms:
OP1: (-18.480,70.907,81.450)
OP2: (-16.062,71.400,82.113)
C3': (-16.483,74.108,77.877)
C1': (-18.280,74.839,76.434)
C5': (-18.024,72.394,79.018)
O4': (-18.694,73.723,77.153)
C8: (-20.329,76.149,75.896)
O2': (-16.008,74.960,75.656)
C6: (-21.013,78.421,78.361)
C5: (-20.588,77.457,77.466)
C4: (-19.421,76.749,77.768)
P: (-17.327,71.845,81.471)
C4': (-17.574,73.054,77.748)
C2': (-16.825,75.152,76.806)
C2: (-19.145,77.848,79.635)
N1: (-20.250,78.610,79.466)
N3: (-18.637,76.888,78.845)
N6: (-22.111,79.139,78.143)
N7: (-21.164,77.077,76.281)
N9: (-19.236,75.924,76.709)
O5': (-17.018,72.391,80.003)
O3': (-15.197,73.531,77.686)
OP2: (-16.062,71.400,82.113)
C3': (-16.483,74.108,77.877)
C1': (-18.280,74.839,76.434)
C5': (-18.024,72.394,79.018)
O4': (-18.694,73.723,77.153)
C8: (-20.329,76.149,75.896)
O2': (-16.008,74.960,75.656)
C6: (-21.013,78.421,78.361)
C5: (-20.588,77.457,77.466)
C4: (-19.421,76.749,77.768)
P: (-17.327,71.845,81.471)
C4': (-17.574,73.054,77.748)
C2': (-16.825,75.152,76.806)
C2: (-19.145,77.848,79.635)
N1: (-20.250,78.610,79.466)
N3: (-18.637,76.888,78.845)
N6: (-22.111,79.139,78.143)
N7: (-21.164,77.077,76.281)
N9: (-19.236,75.924,76.709)
O5': (-17.018,72.391,80.003)
O3': (-15.197,73.531,77.686)
OP1: (-15.103,75.655,70.331)
OP2: (-14.130,76.446,72.573)
C3': (-18.562,78.864,71.870)
C1': (-19.541,78.709,74.036)
C5': (-17.858,76.384,71.830)
O6: (-16.726,81.045,78.845)
O4': (-19.092,77.430,73.636)
C8: (-17.387,78.738,75.310)
C2: (-19.955,81.457,77.550)
C6: (-17.682,80.886,78.077)
C5: (-17.770,80.077,76.921)
C4: (-18.934,80.043,76.197)
P: (-15.288,75.928,71.785)
C4': (-18.890,77.417,72.203)
C2': (-19.489,79.633,72.805)
O2': (-20.794,79.749,72.242)
N1: (-18.851,81.554,78.328)
N2: (-20.980,82.193,77.993)
N3: (-20.062,80.725,76.454)
N7: (-16.809,79.252,76.357)
N9: (-18.674,79.175,75.140)
O5': (-16.547,76.875,72.006)
O3': (-18.769,79.167,70.511)
OP2: (-14.130,76.446,72.573)
C3': (-18.562,78.864,71.870)
C1': (-19.541,78.709,74.036)
C5': (-17.858,76.384,71.830)
O6: (-16.726,81.045,78.845)
O4': (-19.092,77.430,73.636)
C8: (-17.387,78.738,75.310)
C2: (-19.955,81.457,77.550)
C6: (-17.682,80.886,78.077)
C5: (-17.770,80.077,76.921)
C4: (-18.934,80.043,76.197)
P: (-15.288,75.928,71.785)
C4': (-18.890,77.417,72.203)
C2': (-19.489,79.633,72.805)
O2': (-20.794,79.749,72.242)
N1: (-18.851,81.554,78.328)
N2: (-20.980,82.193,77.993)
N3: (-20.062,80.725,76.454)
N7: (-16.809,79.252,76.357)
N9: (-18.674,79.175,75.140)
O5': (-16.547,76.875,72.006)
O3': (-18.769,79.167,70.511)
Image (generated by PyMOL):