ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIX:A163:A109

Extra

PDB:
ATOM 1 O3' G A 162 27.181 11.155 13.945 1.00 29.72 O
ATOM 2 P A A 163 25.756 10.845 13.293 1.00 30.03 P
ATOM 3 OP1 A A 163 25.444 11.868 12.262 1.00 29.39 O
ATOM 4 OP2 A A 163 24.791 10.644 14.402 1.00 31.15 O
ATOM 5 O5' A A 163 26.063 9.430 12.630 1.00 29.96 O
ATOM 6 C5' A A 163 25.859 8.198 13.328 1.00 30.87 C
ATOM 7 C4' A A 163 26.033 7.025 12.368 1.00 31.66 C
ATOM 8 O4' A A 163 25.198 7.192 11.183 1.00 32.46 O
ATOM 9 C3' A A 163 27.448 6.856 11.835 1.00 31.54 C
ATOM 10 O3' A A 163 27.726 5.490 11.606 1.00 31.30 O
ATOM 11 C2' A A 163 27.397 7.657 10.538 1.00 32.01 C
ATOM 12 O2' A A 163 28.408 7.353 9.598 1.00 32.04 O
ATOM 13 C1' A A 163 26.007 7.297 10.027 1.00 32.81 C
ATOM 14 N9 A A 163 25.519 8.361 9.164 1.00 33.79 N
ATOM 15 C8 A A 163 25.450 9.694 9.479 1.00 34.37 C
ATOM 16 N7 A A 163 24.991 10.453 8.514 1.00 34.74 N
ATOM 17 C5 A A 163 24.753 9.553 7.487 1.00 34.85 C
ATOM 18 C6 A A 163 24.260 9.730 6.178 1.00 34.50 C
ATOM 19 N6 A A 163 23.919 10.932 5.703 1.00 33.76 N
ATOM 20 N1 A A 163 24.132 8.628 5.395 1.00 34.93 N
ATOM 21 C2 A A 163 24.483 7.425 5.887 1.00 35.34 C
ATOM 22 N3 A A 163 24.962 7.133 7.106 1.00 35.56 N
ATOM 23 C4 A A 163 25.076 8.252 7.864 1.00 34.96 C
ATOM 24 P G A 164 28.643 4.695 12.645 1.00 31.81 P
ATOM 25 OP1 G A 164 29.066 3.416 12.024 1.00 31.15 O
ATOM 26 OP2 G A 164 27.927 4.705 13.945 1.00 31.80 O
ATOM 27 O5' G A 164 29.923 5.643 12.813 1.00 31.11 O
TER

ATOM 1 O3' U B 108 14.511 11.358 6.877 1.00 46.86 O
ATOM 2 P G B 109 15.225 10.113 7.590 1.00 49.75 P
ATOM 3 OP1 G B 109 15.473 9.096 6.537 1.00 49.26 O
ATOM 4 OP2 G B 109 14.457 9.751 8.806 1.00 49.89 O
ATOM 5 O5' G B 109 16.607 10.739 8.090 1.00 50.70 O
ATOM 6 C5' G B 109 17.738 10.645 7.258 1.00 53.18 C
ATOM 7 C4' G B 109 18.756 11.706 7.612 1.00 54.93 C
ATOM 8 O4' G B 109 19.419 11.298 8.839 1.00 56.73 O
ATOM 9 C3' G B 109 19.835 11.881 6.546 1.00 55.10 C
ATOM 10 O3' G B 109 19.513 12.996 5.669 1.00 52.98 O
ATOM 11 C2' G B 109 21.132 12.027 7.365 1.00 56.83 C
ATOM 12 O2' G B 109 21.494 13.370 7.660 1.00 57.06 O
ATOM 13 C1' G B 109 20.829 11.267 8.670 1.00 57.92 C
ATOM 14 N9 G B 109 21.303 9.870 8.782 1.00 59.00 N
ATOM 15 C8 G B 109 22.034 9.341 9.828 1.00 59.44 C
ATOM 16 N7 G B 109 22.328 8.072 9.692 1.00 59.18 N
ATOM 17 C5 G B 109 21.753 7.725 8.477 1.00 59.11 C
ATOM 18 C6 G B 109 21.737 6.481 7.797 1.00 59.25 C
ATOM 19 O6 G B 109 22.247 5.413 8.152 1.00 58.99 O
ATOM 20 N1 G B 109 21.047 6.548 6.583 1.00 59.75 N
ATOM 21 C2 G B 109 20.440 7.687 6.088 1.00 59.92 C
ATOM 22 N2 G B 109 19.806 7.595 4.905 1.00 59.85 N
ATOM 23 N3 G B 109 20.453 8.853 6.719 1.00 59.57 N
ATOM 24 C4 G B 109 21.120 8.812 7.904 1.00 59.26 C
ATOM 25 P C B 110 18.646 12.777 4.324 1.00 50.87 P
ATOM 26 OP1 C B 110 17.224 12.662 4.726 1.00 50.53 O
ATOM 27 OP2 C B 110 19.304 11.701 3.542 1.00 50.58 O
ATOM 28 O5' C B 110 18.766 14.158 3.519 1.00 47.90 O
TER

Atoms:
OP1: (25.444,11.868,12.262)
OP2: (24.791,10.644,14.402)
C3': (27.448,6.856,11.835)
C1': (26.007,7.297,10.027)
C5': (25.859,8.198,13.328)
O4': (25.198,7.192,11.183)
C8: (25.450,9.694,9.479)
O2': (28.408,7.353,9.598)
C6: (24.260,9.730,6.178)
C5: (24.753,9.553,7.487)
C4: (25.076,8.252,7.864)
P: (25.756,10.845,13.293)
C4': (26.033,7.025,12.368)
C2': (27.397,7.657,10.538)
C2: (24.483,7.425,5.887)
N1: (24.132,8.628,5.395)
N3: (24.962,7.133,7.106)
N6: (23.919,10.932,5.703)
N7: (24.991,10.453,8.514)
N9: (25.519,8.361,9.164)
O5': (26.063,9.430,12.630)
O3': (27.726,5.490,11.606)
OP1: (15.473,9.096,6.537)
OP2: (14.457,9.751,8.806)
C3': (19.835,11.881,6.546)
C1': (20.829,11.267,8.670)
C5': (17.738,10.645,7.258)
O6: (22.247,5.413,8.152)
O4': (19.419,11.298,8.839)
C8: (22.034,9.341,9.828)
C2: (20.440,7.687,6.088)
C6: (21.737,6.481,7.797)
C5: (21.753,7.725,8.477)
C4: (21.120,8.812,7.904)
P: (15.225,10.113,7.590)
C4': (18.756,11.706,7.612)
C2': (21.132,12.027,7.365)
O2': (21.494,13.370,7.660)
N1: (21.047,6.548,6.583)
N2: (19.806,7.595,4.905)
N3: (20.453,8.853,6.719)
N7: (22.328,8.072,9.692)
N9: (21.303,9.870,8.782)
O5': (16.607,10.739,8.090)
O3': (19.513,12.996,5.669)
Image (generated by PyMOL):
PyMOL image
show in jmol