Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DXI:C56:C16
Extra
PDB:
ATOM 1 O3' G A 55 -6.565 74.949 49.225 1.00 84.71 O
ATOM 2 P A A 56 -5.971 76.117 50.152 1.00 91.19 P
ATOM 3 OP1 A A 56 -7.107 76.876 50.750 1.00 99.01 O
ATOM 4 OP2 A A 56 -4.962 76.837 49.341 1.00 90.44 O
ATOM 5 O5' A A 56 -5.214 75.346 51.321 1.00 88.10 O
ATOM 6 C5' A A 56 -3.854 75.643 51.643 1.00 88.08 C
ATOM 7 C4' A A 56 -2.956 74.529 51.152 1.00 85.43 C
ATOM 8 O4' A A 56 -2.670 74.739 49.736 1.00 83.89 O
ATOM 9 C3' A A 56 -1.593 74.478 51.810 1.00 82.59 C
ATOM 10 O3' A A 56 -1.310 73.553 52.858 1.00 80.68 O
ATOM 11 C2' A A 56 -0.593 75.161 50.888 1.00 85.39 C
ATOM 12 O2' A A 56 0.592 74.410 50.730 1.00 94.53 O
ATOM 13 C1' A A 56 -1.322 75.154 49.545 1.00 82.21 C
ATOM 14 N9 A A 56 -1.315 76.487 48.935 1.00 85.56 N
ATOM 15 C8 A A 56 -1.979 77.611 49.368 1.00 86.55 C
ATOM 16 N7 A A 56 -1.761 78.673 48.628 1.00 81.73 N
ATOM 17 C5 A A 56 -0.900 78.220 47.640 1.00 83.83 C
ATOM 18 C6 A A 56 -0.296 78.862 46.543 1.00 85.09 C
ATOM 19 N6 A A 56 -0.473 80.148 46.245 1.00 84.56 N
ATOM 20 N1 A A 56 0.507 78.125 45.750 1.00 86.98 N
ATOM 21 C2 A A 56 0.686 76.835 46.044 1.00 86.30 C
ATOM 22 N3 A A 56 0.176 76.118 47.042 1.00 90.30 N
ATOM 23 C4 A A 56 -0.618 76.877 47.814 1.00 85.19 C
ATOM 24 P U A 57 -0.819 72.067 52.508 1.00 72.68 P
ATOM 25 OP1 U A 57 -1.335 71.696 51.162 1.00 73.05 O
ATOM 26 OP2 U A 57 -1.175 71.242 53.687 1.00 78.43 O
ATOM 27 O5' U A 57 0.770 72.163 52.413 1.00 79.41 O
TER
ATOM 1 O3' C B 15 5.244 74.995 41.700 1.00 86.60 O
ATOM 2 P G B 16 4.156 75.383 40.595 1.00 88.71 P
ATOM 3 OP1 G B 16 4.586 74.828 39.284 1.00 84.81 O
ATOM 4 OP2 G B 16 3.899 76.838 40.730 1.00 88.14 O
ATOM 5 O5' G B 16 2.855 74.611 41.067 1.00 79.75 O
ATOM 6 C5' G B 16 2.067 75.142 42.107 1.00 81.69 C
ATOM 7 C4' G B 16 1.331 74.043 42.812 1.00 83.91 C
ATOM 8 O4' G B 16 0.552 74.669 43.858 1.00 84.61 O
ATOM 9 C3' G B 16 0.325 73.285 41.962 1.00 86.32 C
ATOM 10 O3' G B 16 0.578 71.978 41.425 1.00 81.47 O
ATOM 11 C2' G B 16 -1.041 73.913 42.204 1.00 86.94 C
ATOM 12 O2' G B 16 -2.061 72.956 42.423 1.00 89.60 O
ATOM 13 C1' G B 16 -0.820 74.682 43.510 1.00 86.00 C
ATOM 14 N9 G B 16 -1.224 76.074 43.371 1.00 80.71 N
ATOM 15 C8 G B 16 -0.859 76.950 42.379 1.00 77.84 C
ATOM 16 N7 G B 16 -1.405 78.125 42.513 1.00 76.93 N
ATOM 17 C5 G B 16 -2.175 78.015 43.662 1.00 81.88 C
ATOM 18 C6 G B 16 -3.010 78.961 44.304 1.00 83.34 C
ATOM 19 O6 G B 16 -3.261 80.122 43.961 1.00 90.86 O
ATOM 20 N1 G B 16 -3.592 78.434 45.453 1.00 78.21 N
ATOM 21 C2 G B 16 -3.405 77.154 45.916 1.00 77.47 C
ATOM 22 N2 G B 16 -4.044 76.827 47.040 1.00 74.05 N
ATOM 23 N3 G B 16 -2.645 76.262 45.319 1.00 79.79 N
ATOM 24 C4 G B 16 -2.064 76.758 44.207 1.00 81.93 C
ATOM 25 P G B 17 0.484 70.670 42.369 1.00 76.15 P
ATOM 26 OP1 G B 17 1.411 70.845 43.520 1.00 76.99 O
ATOM 27 OP2 G B 17 0.650 69.508 41.463 1.00 86.12 O
ATOM 28 O5' G B 17 -1.007 70.612 42.931 1.00 72.69 O
TER
ATOM 2 P A A 56 -5.971 76.117 50.152 1.00 91.19 P
ATOM 3 OP1 A A 56 -7.107 76.876 50.750 1.00 99.01 O
ATOM 4 OP2 A A 56 -4.962 76.837 49.341 1.00 90.44 O
ATOM 5 O5' A A 56 -5.214 75.346 51.321 1.00 88.10 O
ATOM 6 C5' A A 56 -3.854 75.643 51.643 1.00 88.08 C
ATOM 7 C4' A A 56 -2.956 74.529 51.152 1.00 85.43 C
ATOM 8 O4' A A 56 -2.670 74.739 49.736 1.00 83.89 O
ATOM 9 C3' A A 56 -1.593 74.478 51.810 1.00 82.59 C
ATOM 10 O3' A A 56 -1.310 73.553 52.858 1.00 80.68 O
ATOM 11 C2' A A 56 -0.593 75.161 50.888 1.00 85.39 C
ATOM 12 O2' A A 56 0.592 74.410 50.730 1.00 94.53 O
ATOM 13 C1' A A 56 -1.322 75.154 49.545 1.00 82.21 C
ATOM 14 N9 A A 56 -1.315 76.487 48.935 1.00 85.56 N
ATOM 15 C8 A A 56 -1.979 77.611 49.368 1.00 86.55 C
ATOM 16 N7 A A 56 -1.761 78.673 48.628 1.00 81.73 N
ATOM 17 C5 A A 56 -0.900 78.220 47.640 1.00 83.83 C
ATOM 18 C6 A A 56 -0.296 78.862 46.543 1.00 85.09 C
ATOM 19 N6 A A 56 -0.473 80.148 46.245 1.00 84.56 N
ATOM 20 N1 A A 56 0.507 78.125 45.750 1.00 86.98 N
ATOM 21 C2 A A 56 0.686 76.835 46.044 1.00 86.30 C
ATOM 22 N3 A A 56 0.176 76.118 47.042 1.00 90.30 N
ATOM 23 C4 A A 56 -0.618 76.877 47.814 1.00 85.19 C
ATOM 24 P U A 57 -0.819 72.067 52.508 1.00 72.68 P
ATOM 25 OP1 U A 57 -1.335 71.696 51.162 1.00 73.05 O
ATOM 26 OP2 U A 57 -1.175 71.242 53.687 1.00 78.43 O
ATOM 27 O5' U A 57 0.770 72.163 52.413 1.00 79.41 O
TER
ATOM 1 O3' C B 15 5.244 74.995 41.700 1.00 86.60 O
ATOM 2 P G B 16 4.156 75.383 40.595 1.00 88.71 P
ATOM 3 OP1 G B 16 4.586 74.828 39.284 1.00 84.81 O
ATOM 4 OP2 G B 16 3.899 76.838 40.730 1.00 88.14 O
ATOM 5 O5' G B 16 2.855 74.611 41.067 1.00 79.75 O
ATOM 6 C5' G B 16 2.067 75.142 42.107 1.00 81.69 C
ATOM 7 C4' G B 16 1.331 74.043 42.812 1.00 83.91 C
ATOM 8 O4' G B 16 0.552 74.669 43.858 1.00 84.61 O
ATOM 9 C3' G B 16 0.325 73.285 41.962 1.00 86.32 C
ATOM 10 O3' G B 16 0.578 71.978 41.425 1.00 81.47 O
ATOM 11 C2' G B 16 -1.041 73.913 42.204 1.00 86.94 C
ATOM 12 O2' G B 16 -2.061 72.956 42.423 1.00 89.60 O
ATOM 13 C1' G B 16 -0.820 74.682 43.510 1.00 86.00 C
ATOM 14 N9 G B 16 -1.224 76.074 43.371 1.00 80.71 N
ATOM 15 C8 G B 16 -0.859 76.950 42.379 1.00 77.84 C
ATOM 16 N7 G B 16 -1.405 78.125 42.513 1.00 76.93 N
ATOM 17 C5 G B 16 -2.175 78.015 43.662 1.00 81.88 C
ATOM 18 C6 G B 16 -3.010 78.961 44.304 1.00 83.34 C
ATOM 19 O6 G B 16 -3.261 80.122 43.961 1.00 90.86 O
ATOM 20 N1 G B 16 -3.592 78.434 45.453 1.00 78.21 N
ATOM 21 C2 G B 16 -3.405 77.154 45.916 1.00 77.47 C
ATOM 22 N2 G B 16 -4.044 76.827 47.040 1.00 74.05 N
ATOM 23 N3 G B 16 -2.645 76.262 45.319 1.00 79.79 N
ATOM 24 C4 G B 16 -2.064 76.758 44.207 1.00 81.93 C
ATOM 25 P G B 17 0.484 70.670 42.369 1.00 76.15 P
ATOM 26 OP1 G B 17 1.411 70.845 43.520 1.00 76.99 O
ATOM 27 OP2 G B 17 0.650 69.508 41.463 1.00 86.12 O
ATOM 28 O5' G B 17 -1.007 70.612 42.931 1.00 72.69 O
TER
Atoms:
OP1: (-7.107,76.876,50.750)
OP2: (-4.962,76.837,49.341)
C3': (-1.593,74.478,51.810)
C1': (-1.322,75.154,49.545)
C5': (-3.854,75.643,51.643)
O4': (-2.670,74.739,49.736)
C8: (-1.979,77.611,49.368)
O2': (0.592,74.410,50.730)
C6: (-0.296,78.862,46.543)
C5: (-0.900,78.220,47.640)
C4: (-0.618,76.877,47.814)
P: (-5.971,76.117,50.152)
C4': (-2.956,74.529,51.152)
C2': (-0.593,75.161,50.888)
C2: (0.686,76.835,46.044)
N1: (0.507,78.125,45.750)
N3: (0.176,76.118,47.042)
N6: (-0.473,80.148,46.245)
N7: (-1.761,78.673,48.628)
N9: (-1.315,76.487,48.935)
O5': (-5.214,75.346,51.321)
O3': (-1.310,73.553,52.858)
OP2: (-4.962,76.837,49.341)
C3': (-1.593,74.478,51.810)
C1': (-1.322,75.154,49.545)
C5': (-3.854,75.643,51.643)
O4': (-2.670,74.739,49.736)
C8: (-1.979,77.611,49.368)
O2': (0.592,74.410,50.730)
C6: (-0.296,78.862,46.543)
C5: (-0.900,78.220,47.640)
C4: (-0.618,76.877,47.814)
P: (-5.971,76.117,50.152)
C4': (-2.956,74.529,51.152)
C2': (-0.593,75.161,50.888)
C2: (0.686,76.835,46.044)
N1: (0.507,78.125,45.750)
N3: (0.176,76.118,47.042)
N6: (-0.473,80.148,46.245)
N7: (-1.761,78.673,48.628)
N9: (-1.315,76.487,48.935)
O5': (-5.214,75.346,51.321)
O3': (-1.310,73.553,52.858)
OP1: (4.586,74.828,39.284)
OP2: (3.899,76.838,40.730)
C3': (0.325,73.285,41.962)
C1': (-0.820,74.682,43.510)
C5': (2.067,75.142,42.107)
O6: (-3.261,80.122,43.961)
O4': (0.552,74.669,43.858)
C8: (-0.859,76.950,42.379)
C2: (-3.405,77.154,45.916)
C6: (-3.010,78.961,44.304)
C5: (-2.175,78.015,43.662)
C4: (-2.064,76.758,44.207)
P: (4.156,75.383,40.595)
C4': (1.331,74.043,42.812)
C2': (-1.041,73.913,42.204)
O2': (-2.061,72.956,42.423)
N1: (-3.592,78.434,45.453)
N2: (-4.044,76.827,47.040)
N3: (-2.645,76.262,45.319)
N7: (-1.405,78.125,42.513)
N9: (-1.224,76.074,43.371)
O5': (2.855,74.611,41.067)
O3': (0.578,71.978,41.425)
OP2: (3.899,76.838,40.730)
C3': (0.325,73.285,41.962)
C1': (-0.820,74.682,43.510)
C5': (2.067,75.142,42.107)
O6: (-3.261,80.122,43.961)
O4': (0.552,74.669,43.858)
C8: (-0.859,76.950,42.379)
C2: (-3.405,77.154,45.916)
C6: (-3.010,78.961,44.304)
C5: (-2.175,78.015,43.662)
C4: (-2.064,76.758,44.207)
P: (4.156,75.383,40.595)
C4': (1.331,74.043,42.812)
C2': (-1.041,73.913,42.204)
O2': (-2.061,72.956,42.423)
N1: (-3.592,78.434,45.453)
N2: (-4.044,76.827,47.040)
N3: (-2.645,76.262,45.319)
N7: (-1.405,78.125,42.513)
N9: (-1.224,76.074,43.371)
O5': (2.855,74.611,41.067)
O3': (0.578,71.978,41.425)
Image (generated by PyMOL):