Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKI:A10:A12
Extra
PDB:
ATOM 1 O3' C A 9 -0.133 4.749 -53.289 1.00 15.45 O
ATOM 2 P A A 10 1.349 4.327 -52.855 1.00 15.60 P
ATOM 3 OP1 A A 10 2.285 5.409 -53.240 1.00 14.98 O
ATOM 4 OP2 A A 10 1.552 2.949 -53.354 1.00 14.58 O
ATOM 5 O5' A A 10 1.268 4.246 -51.269 1.00 15.95 O
ATOM 6 C5' A A 10 0.229 3.551 -50.600 1.00 16.56 C
ATOM 7 C4' A A 10 0.274 4.025 -49.166 1.00 16.72 C
ATOM 8 O4' A A 10 0.231 5.468 -49.212 1.00 17.45 O
ATOM 9 C3' A A 10 -0.877 3.610 -48.265 1.00 17.06 C
ATOM 10 O3' A A 10 -0.536 2.379 -47.614 1.00 17.04 O
ATOM 11 C2' A A 10 -0.925 4.776 -47.265 1.00 17.11 C
ATOM 12 O2' A A 10 -0.164 4.505 -46.100 1.00 18.23 O
ATOM 13 C1' A A 10 -0.272 5.955 -47.998 1.00 18.51 C
ATOM 14 N9 A A 10 -1.089 7.143 -48.307 1.00 19.91 N
ATOM 15 C8 A A 10 -0.614 8.433 -48.461 1.00 20.24 C
ATOM 16 N7 A A 10 -1.537 9.326 -48.748 1.00 20.90 N
ATOM 17 C5 A A 10 -2.702 8.567 -48.787 1.00 20.47 C
ATOM 18 C6 A A 10 -4.044 8.910 -49.041 1.00 21.33 C
ATOM 19 N6 A A 10 -4.456 10.153 -49.311 1.00 21.37 N
ATOM 20 N1 A A 10 -4.958 7.922 -49.005 1.00 20.59 N
ATOM 21 C2 A A 10 -4.559 6.667 -48.735 1.00 21.30 C
ATOM 22 N3 A A 10 -3.334 6.220 -48.481 1.00 20.45 N
ATOM 23 C4 A A 10 -2.443 7.226 -48.527 1.00 20.65 C
ATOM 24 P G A 11 -1.186 0.951 -47.982 1.00 18.25 P
ATOM 25 OP1 G A 11 -0.400 -0.080 -47.266 1.00 18.26 O
ATOM 26 OP2 G A 11 -1.341 0.816 -49.445 1.00 18.03 O
ATOM 27 O5' G A 11 -2.655 1.050 -47.358 1.00 17.80 O
TER
ATOM 1 O3' G B 11 -3.649 3.742 -43.880 1.00 19.31 O
ATOM 2 P G B 12 -2.333 4.054 -43.039 1.00 19.39 P
ATOM 3 OP1 G B 12 -1.207 3.303 -43.649 1.00 20.36 O
ATOM 4 OP2 G B 12 -2.636 3.911 -41.600 1.00 19.47 O
ATOM 5 O5' G B 12 -2.204 5.622 -43.339 1.00 17.73 O
ATOM 6 C5' G B 12 -0.961 6.306 -43.399 1.00 16.66 C
ATOM 7 C4' G B 12 -1.187 7.715 -43.927 1.00 15.73 C
ATOM 8 O4' G B 12 -1.882 7.669 -45.199 1.00 14.58 O
ATOM 9 C3' G B 12 -2.121 8.565 -43.089 1.00 15.71 C
ATOM 10 O3' G B 12 -1.459 9.092 -41.949 1.00 16.48 O
ATOM 11 C2' G B 12 -2.523 9.643 -44.088 1.00 15.31 C
ATOM 12 O2' G B 12 -1.477 10.565 -44.338 1.00 14.81 O
ATOM 13 C1' G B 12 -2.758 8.788 -45.319 1.00 14.56 C
ATOM 14 N9 G B 12 -4.148 8.332 -45.537 1.00 13.21 N
ATOM 15 C8 G B 12 -4.613 7.034 -45.449 1.00 12.17 C
ATOM 16 N7 G B 12 -5.888 6.911 -45.704 1.00 11.24 N
ATOM 17 C5 G B 12 -6.299 8.207 -45.994 1.00 11.67 C
ATOM 18 C6 G B 12 -7.584 8.697 -46.348 1.00 11.83 C
ATOM 19 O6 G B 12 -8.637 8.056 -46.483 1.00 12.19 O
ATOM 20 N1 G B 12 -7.585 10.081 -46.552 1.00 12.91 N
ATOM 21 C2 G B 12 -6.471 10.877 -46.431 1.00 12.35 C
ATOM 22 N2 G B 12 -6.640 12.186 -46.661 1.00 14.02 N
ATOM 23 N3 G B 12 -5.269 10.421 -46.101 1.00 12.66 N
ATOM 24 C4 G B 12 -5.246 9.087 -45.895 1.00 12.14 C
ATOM 25 P G B 13 -2.316 9.346 -40.629 1.00 16.18 P
ATOM 26 OP1 G B 13 -1.385 9.821 -39.584 1.00 17.30 O
ATOM 27 OP2 G B 13 -3.135 8.132 -40.404 1.00 16.21 O
ATOM 28 O5' G B 13 -3.316 10.537 -41.033 1.00 16.17 O
TER
ATOM 2 P A A 10 1.349 4.327 -52.855 1.00 15.60 P
ATOM 3 OP1 A A 10 2.285 5.409 -53.240 1.00 14.98 O
ATOM 4 OP2 A A 10 1.552 2.949 -53.354 1.00 14.58 O
ATOM 5 O5' A A 10 1.268 4.246 -51.269 1.00 15.95 O
ATOM 6 C5' A A 10 0.229 3.551 -50.600 1.00 16.56 C
ATOM 7 C4' A A 10 0.274 4.025 -49.166 1.00 16.72 C
ATOM 8 O4' A A 10 0.231 5.468 -49.212 1.00 17.45 O
ATOM 9 C3' A A 10 -0.877 3.610 -48.265 1.00 17.06 C
ATOM 10 O3' A A 10 -0.536 2.379 -47.614 1.00 17.04 O
ATOM 11 C2' A A 10 -0.925 4.776 -47.265 1.00 17.11 C
ATOM 12 O2' A A 10 -0.164 4.505 -46.100 1.00 18.23 O
ATOM 13 C1' A A 10 -0.272 5.955 -47.998 1.00 18.51 C
ATOM 14 N9 A A 10 -1.089 7.143 -48.307 1.00 19.91 N
ATOM 15 C8 A A 10 -0.614 8.433 -48.461 1.00 20.24 C
ATOM 16 N7 A A 10 -1.537 9.326 -48.748 1.00 20.90 N
ATOM 17 C5 A A 10 -2.702 8.567 -48.787 1.00 20.47 C
ATOM 18 C6 A A 10 -4.044 8.910 -49.041 1.00 21.33 C
ATOM 19 N6 A A 10 -4.456 10.153 -49.311 1.00 21.37 N
ATOM 20 N1 A A 10 -4.958 7.922 -49.005 1.00 20.59 N
ATOM 21 C2 A A 10 -4.559 6.667 -48.735 1.00 21.30 C
ATOM 22 N3 A A 10 -3.334 6.220 -48.481 1.00 20.45 N
ATOM 23 C4 A A 10 -2.443 7.226 -48.527 1.00 20.65 C
ATOM 24 P G A 11 -1.186 0.951 -47.982 1.00 18.25 P
ATOM 25 OP1 G A 11 -0.400 -0.080 -47.266 1.00 18.26 O
ATOM 26 OP2 G A 11 -1.341 0.816 -49.445 1.00 18.03 O
ATOM 27 O5' G A 11 -2.655 1.050 -47.358 1.00 17.80 O
TER
ATOM 1 O3' G B 11 -3.649 3.742 -43.880 1.00 19.31 O
ATOM 2 P G B 12 -2.333 4.054 -43.039 1.00 19.39 P
ATOM 3 OP1 G B 12 -1.207 3.303 -43.649 1.00 20.36 O
ATOM 4 OP2 G B 12 -2.636 3.911 -41.600 1.00 19.47 O
ATOM 5 O5' G B 12 -2.204 5.622 -43.339 1.00 17.73 O
ATOM 6 C5' G B 12 -0.961 6.306 -43.399 1.00 16.66 C
ATOM 7 C4' G B 12 -1.187 7.715 -43.927 1.00 15.73 C
ATOM 8 O4' G B 12 -1.882 7.669 -45.199 1.00 14.58 O
ATOM 9 C3' G B 12 -2.121 8.565 -43.089 1.00 15.71 C
ATOM 10 O3' G B 12 -1.459 9.092 -41.949 1.00 16.48 O
ATOM 11 C2' G B 12 -2.523 9.643 -44.088 1.00 15.31 C
ATOM 12 O2' G B 12 -1.477 10.565 -44.338 1.00 14.81 O
ATOM 13 C1' G B 12 -2.758 8.788 -45.319 1.00 14.56 C
ATOM 14 N9 G B 12 -4.148 8.332 -45.537 1.00 13.21 N
ATOM 15 C8 G B 12 -4.613 7.034 -45.449 1.00 12.17 C
ATOM 16 N7 G B 12 -5.888 6.911 -45.704 1.00 11.24 N
ATOM 17 C5 G B 12 -6.299 8.207 -45.994 1.00 11.67 C
ATOM 18 C6 G B 12 -7.584 8.697 -46.348 1.00 11.83 C
ATOM 19 O6 G B 12 -8.637 8.056 -46.483 1.00 12.19 O
ATOM 20 N1 G B 12 -7.585 10.081 -46.552 1.00 12.91 N
ATOM 21 C2 G B 12 -6.471 10.877 -46.431 1.00 12.35 C
ATOM 22 N2 G B 12 -6.640 12.186 -46.661 1.00 14.02 N
ATOM 23 N3 G B 12 -5.269 10.421 -46.101 1.00 12.66 N
ATOM 24 C4 G B 12 -5.246 9.087 -45.895 1.00 12.14 C
ATOM 25 P G B 13 -2.316 9.346 -40.629 1.00 16.18 P
ATOM 26 OP1 G B 13 -1.385 9.821 -39.584 1.00 17.30 O
ATOM 27 OP2 G B 13 -3.135 8.132 -40.404 1.00 16.21 O
ATOM 28 O5' G B 13 -3.316 10.537 -41.033 1.00 16.17 O
TER
Atoms:
OP1: (2.285,5.409,-53.240)
OP2: (1.552,2.949,-53.354)
C3': (-0.877,3.610,-48.265)
C1': (-0.272,5.955,-47.998)
C5': (0.229,3.551,-50.600)
O4': (0.231,5.468,-49.212)
C8: (-0.614,8.433,-48.461)
O2': (-0.164,4.505,-46.100)
C6: (-4.044,8.910,-49.041)
C5: (-2.702,8.567,-48.787)
C4: (-2.443,7.226,-48.527)
P: (1.349,4.327,-52.855)
C4': (0.274,4.025,-49.166)
C2': (-0.925,4.776,-47.265)
C2: (-4.559,6.667,-48.735)
N1: (-4.958,7.922,-49.005)
N3: (-3.334,6.220,-48.481)
N6: (-4.456,10.153,-49.311)
N7: (-1.537,9.326,-48.748)
N9: (-1.089,7.143,-48.307)
O5': (1.268,4.246,-51.269)
O3': (-0.536,2.379,-47.614)
OP2: (1.552,2.949,-53.354)
C3': (-0.877,3.610,-48.265)
C1': (-0.272,5.955,-47.998)
C5': (0.229,3.551,-50.600)
O4': (0.231,5.468,-49.212)
C8: (-0.614,8.433,-48.461)
O2': (-0.164,4.505,-46.100)
C6: (-4.044,8.910,-49.041)
C5: (-2.702,8.567,-48.787)
C4: (-2.443,7.226,-48.527)
P: (1.349,4.327,-52.855)
C4': (0.274,4.025,-49.166)
C2': (-0.925,4.776,-47.265)
C2: (-4.559,6.667,-48.735)
N1: (-4.958,7.922,-49.005)
N3: (-3.334,6.220,-48.481)
N6: (-4.456,10.153,-49.311)
N7: (-1.537,9.326,-48.748)
N9: (-1.089,7.143,-48.307)
O5': (1.268,4.246,-51.269)
O3': (-0.536,2.379,-47.614)
OP1: (-1.207,3.303,-43.649)
OP2: (-2.636,3.911,-41.600)
C3': (-2.121,8.565,-43.089)
C1': (-2.758,8.788,-45.319)
C5': (-0.961,6.306,-43.399)
O6: (-8.637,8.056,-46.483)
O4': (-1.882,7.669,-45.199)
C8: (-4.613,7.034,-45.449)
C2: (-6.471,10.877,-46.431)
C6: (-7.584,8.697,-46.348)
C5: (-6.299,8.207,-45.994)
C4: (-5.246,9.087,-45.895)
P: (-2.333,4.054,-43.039)
C4': (-1.187,7.715,-43.927)
C2': (-2.523,9.643,-44.088)
O2': (-1.477,10.565,-44.338)
N1: (-7.585,10.081,-46.552)
N2: (-6.640,12.186,-46.661)
N3: (-5.269,10.421,-46.101)
N7: (-5.888,6.911,-45.704)
N9: (-4.148,8.332,-45.537)
O5': (-2.204,5.622,-43.339)
O3': (-1.459,9.092,-41.949)
OP2: (-2.636,3.911,-41.600)
C3': (-2.121,8.565,-43.089)
C1': (-2.758,8.788,-45.319)
C5': (-0.961,6.306,-43.399)
O6: (-8.637,8.056,-46.483)
O4': (-1.882,7.669,-45.199)
C8: (-4.613,7.034,-45.449)
C2: (-6.471,10.877,-46.431)
C6: (-7.584,8.697,-46.348)
C5: (-6.299,8.207,-45.994)
C4: (-5.246,9.087,-45.895)
P: (-2.333,4.054,-43.039)
C4': (-1.187,7.715,-43.927)
C2': (-2.523,9.643,-44.088)
O2': (-1.477,10.565,-44.338)
N1: (-7.585,10.081,-46.552)
N2: (-6.640,12.186,-46.661)
N3: (-5.269,10.421,-46.101)
N7: (-5.888,6.911,-45.704)
N9: (-4.148,8.332,-45.537)
O5': (-2.204,5.622,-43.339)
O3': (-1.459,9.092,-41.949)
Image (generated by PyMOL):