ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A448:A22

Extra

PDB:
ATOM 1 O3' A A 447 45.764 138.794 53.455 1.00 34.93 O
ATOM 2 P A A 448 44.355 138.032 53.292 1.00 38.43 P
ATOM 3 OP1 A A 448 43.675 137.988 54.594 1.00 38.03 O
ATOM 4 OP2 A A 448 44.630 136.760 52.563 1.00 36.70 O
ATOM 5 O5' A A 448 43.504 139.001 52.364 1.00 38.54 O
ATOM 6 C5' A A 448 43.951 139.299 51.033 1.00 38.21 C
ATOM 7 C4' A A 448 42.794 139.740 50.186 1.00 39.07 C
ATOM 8 O4' A A 448 41.811 138.680 50.094 1.00 38.97 O
ATOM 9 C3' A A 448 42.039 140.970 50.664 1.00 38.86 C
ATOM 10 O3' A A 448 41.608 141.625 49.495 1.00 37.38 O
ATOM 11 C2' A A 448 40.847 140.384 51.403 1.00 39.48 C
ATOM 12 O2' A A 448 39.734 141.261 51.420 1.00 39.81 O
ATOM 13 C1' A A 448 40.556 139.163 50.537 1.00 39.64 C
ATOM 14 N9 A A 448 39.905 138.078 51.245 1.00 38.74 N
ATOM 15 C8 A A 448 40.237 137.523 52.446 1.00 38.99 C
ATOM 16 N7 A A 448 39.529 136.472 52.748 1.00 39.71 N
ATOM 17 C5 A A 448 38.649 136.349 51.687 1.00 39.54 C
ATOM 18 C6 A A 448 37.649 135.415 51.400 1.00 39.73 C
ATOM 19 N6 A A 448 37.359 134.381 52.192 1.00 39.37 N
ATOM 20 N1 A A 448 36.953 135.578 50.261 1.00 39.95 N
ATOM 21 C2 A A 448 37.256 136.617 49.474 1.00 40.04 C
ATOM 22 N3 A A 448 38.180 137.557 49.636 1.00 39.21 N
ATOM 23 C4 A A 448 38.851 137.355 50.774 1.00 39.01 C
ATOM 24 P C A 449 42.502 142.795 48.902 1.00 36.08 P
ATOM 25 OP1 C A 449 41.821 143.291 47.689 1.00 37.01 O
ATOM 26 OP2 C A 449 43.899 142.302 48.819 1.00 36.37 O
ATOM 27 O5' C A 449 42.412 143.891 50.044 1.00 36.53 O
TER

ATOM 1 O3' C B 21 38.786 139.530 44.236 1.00 53.35 O
ATOM 2 P G B 22 39.708 138.362 43.672 1.00 52.27 P
ATOM 3 OP1 G B 22 40.767 138.902 42.792 1.00 51.72 O
ATOM 4 OP2 G B 22 38.767 137.329 43.155 1.00 51.64 O
ATOM 5 O5' G B 22 40.411 137.831 44.990 1.00 52.07 O
ATOM 6 C5' G B 22 41.310 138.665 45.728 1.00 49.72 C
ATOM 7 C4' G B 22 41.850 137.913 46.921 1.00 48.86 C
ATOM 8 O4' G B 22 40.753 137.491 47.774 1.00 50.37 O
ATOM 9 C3' G B 22 42.570 136.624 46.577 1.00 48.08 C
ATOM 10 O3' G B 22 43.919 136.925 46.225 1.00 44.46 O
ATOM 11 C2' G B 22 42.427 135.807 47.859 1.00 49.50 C
ATOM 12 O2' G B 22 43.320 136.219 48.864 1.00 52.38 O
ATOM 13 C1' G B 22 41.023 136.200 48.316 1.00 51.06 C
ATOM 14 N9 G B 22 40.012 135.265 47.831 1.00 53.67 N
ATOM 15 C8 G B 22 39.281 135.369 46.673 1.00 53.82 C
ATOM 16 N7 G B 22 38.507 134.342 46.459 1.00 54.57 N
ATOM 17 C5 G B 22 38.725 133.514 47.552 1.00 54.85 C
ATOM 18 C6 G B 22 38.184 132.245 47.861 1.00 54.74 C
ATOM 19 O6 G B 22 37.369 131.569 47.219 1.00 54.34 O
ATOM 20 N1 G B 22 38.691 131.757 49.056 1.00 55.47 N
ATOM 21 C2 G B 22 39.599 132.403 49.855 1.00 55.26 C
ATOM 22 N2 G B 22 39.995 131.752 50.953 1.00 56.64 N
ATOM 23 N3 G B 22 40.097 133.595 49.589 1.00 55.33 N
ATOM 24 C4 G B 22 39.631 134.083 48.423 1.00 54.45 C
ATOM 25 P G B 23 44.886 135.771 45.661 1.00 43.69 P
ATOM 26 OP1 G B 23 46.186 136.402 45.347 1.00 42.78 O
ATOM 27 OP2 G B 23 44.167 135.015 44.611 1.00 41.38 O
ATOM 28 O5' G B 23 45.103 134.824 46.920 1.00 43.45 O
TER

Atoms:
OP1: (43.675,137.988,54.594)
OP2: (44.630,136.760,52.563)
C3': (42.039,140.970,50.664)
C1': (40.556,139.163,50.537)
C5': (43.951,139.299,51.033)
O4': (41.811,138.680,50.094)
C8: (40.237,137.523,52.446)
O2': (39.734,141.261,51.420)
C6: (37.649,135.415,51.400)
C5: (38.649,136.349,51.687)
C4: (38.851,137.355,50.774)
P: (44.355,138.032,53.292)
C4': (42.794,139.740,50.186)
C2': (40.847,140.384,51.403)
C2: (37.256,136.617,49.474)
N1: (36.953,135.578,50.261)
N3: (38.180,137.557,49.636)
N6: (37.359,134.381,52.192)
N7: (39.529,136.472,52.748)
N9: (39.905,138.078,51.245)
O5': (43.504,139.001,52.364)
O3': (41.608,141.625,49.495)
OP1: (40.767,138.902,42.792)
OP2: (38.767,137.329,43.155)
C3': (42.570,136.624,46.577)
C1': (41.023,136.200,48.316)
C5': (41.310,138.665,45.728)
O6: (37.369,131.569,47.219)
O4': (40.753,137.491,47.774)
C8: (39.281,135.369,46.673)
C2: (39.599,132.403,49.855)
C6: (38.184,132.245,47.861)
C5: (38.725,133.514,47.552)
C4: (39.631,134.083,48.423)
P: (39.708,138.362,43.672)
C4': (41.850,137.913,46.921)
C2': (42.427,135.807,47.859)
O2': (43.320,136.219,48.864)
N1: (38.691,131.757,49.056)
N2: (39.995,131.752,50.953)
N3: (40.097,133.595,49.589)
N7: (38.507,134.342,46.459)
N9: (40.012,135.265,47.831)
O5': (40.411,137.831,44.990)
O3': (43.919,136.925,46.225)
Image (generated by PyMOL):
PyMOL image
show in jmol