ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:52213:52624

Extra

PDB:
ATOM 1 O3' A A2212 138.691 5.728 221.790 1.00121.58 O
ATOM 2 P A A2213 137.148 5.338 221.459 1.00 83.27 P
ATOM 3 OP1 A A2213 137.023 5.201 219.980 1.00 83.55 O
ATOM 4 OP2 A A2213 136.261 6.313 222.167 1.00 83.18 O
ATOM 5 O5' A A2213 137.051 3.899 222.154 1.00 83.21 O
ATOM 6 C5' A A2213 138.249 3.210 222.546 1.00 83.09 C
ATOM 7 C4' A A2213 138.157 2.599 223.929 1.00 82.90 C
ATOM 8 O4' A A2213 136.805 2.087 224.148 1.00 82.96 O
ATOM 9 C3' A A2213 139.107 1.409 224.178 1.00 82.86 C
ATOM 10 O3' A A2213 139.518 1.408 225.564 1.00 82.62 O
ATOM 11 C2' A A2213 138.186 0.211 223.880 1.00 83.02 C
ATOM 12 O2' A A2213 138.580 -1.025 224.436 1.00 82.98 O
ATOM 13 C1' A A2213 136.873 0.705 224.467 1.00 82.98 C
ATOM 14 N9 A A2213 135.677 0.033 223.943 1.00 83.18 N
ATOM 15 C8 A A2213 134.891 0.359 222.861 1.00 83.39 C
ATOM 16 N7 A A2213 133.883 -0.467 222.686 1.00 83.54 N
ATOM 17 C5 A A2213 133.996 -1.388 223.724 1.00 83.42 C
ATOM 18 C6 A A2213 133.217 -2.506 224.097 1.00 83.49 C
ATOM 19 N6 A A2213 132.123 -2.922 223.456 1.00 83.71 N
ATOM 20 N1 A A2213 133.639 -3.190 225.181 1.00 83.33 N
ATOM 21 C2 A A2213 134.748 -2.797 225.854 1.00 83.12 C
ATOM 22 N3 A A2213 135.556 -1.774 225.615 1.00 83.03 N
ATOM 23 C4 A A2213 135.106 -1.092 224.521 1.00 83.19 C
ATOM 24 P G A2214 140.718 0.468 226.089 1.00101.83 P
ATOM 25 OP1 G A2214 141.718 0.378 224.981 1.00101.96 O
ATOM 26 OP2 G A2214 140.109 -0.804 226.630 1.00101.85 O
ATOM 27 O5' G A2214 141.307 1.309 227.308 1.00101.58 O
TER

ATOM 1 O3' C B2623 140.120 1.091 231.183 1.00 54.80 O
ATOM 2 P G B2624 138.910 0.490 230.254 1.00104.48 P
ATOM 3 OP1 G B2624 137.646 0.581 231.043 1.00104.45 O
ATOM 4 OP2 G B2624 139.349 -0.858 229.741 1.00104.60 O
ATOM 5 O5' G B2624 138.866 1.516 229.040 1.00104.59 O
ATOM 6 C5' G B2624 138.506 2.871 229.236 1.00104.53 C
ATOM 7 C4' G B2624 137.554 3.361 228.164 1.00104.71 C
ATOM 8 O4' G B2624 136.837 2.251 227.565 1.00104.88 O
ATOM 9 C3' G B2624 136.481 4.319 228.641 1.00104.68 C
ATOM 10 O3' G B2624 136.955 5.651 228.646 1.00104.61 O
ATOM 11 C2' G B2624 135.285 4.074 227.690 1.00104.90 C
ATOM 12 O2' G B2624 135.302 4.992 226.600 1.00105.03 O
ATOM 13 C1' G B2624 135.553 2.659 227.145 1.00105.01 C
ATOM 14 N9 G B2624 134.563 1.635 227.575 1.00105.07 N
ATOM 15 C8 G B2624 134.651 0.837 228.699 1.00104.94 C
ATOM 16 N7 G B2624 133.698 -0.044 228.833 1.00105.05 N
ATOM 17 C5 G B2624 132.922 0.159 227.694 1.00105.25 C
ATOM 18 C6 G B2624 131.728 -0.508 227.276 1.00105.45 C
ATOM 19 O6 G B2624 131.117 -1.423 227.843 1.00105.48 O
ATOM 20 N1 G B2624 131.238 -0.019 226.066 1.00105.64 N
ATOM 21 C2 G B2624 131.818 0.996 225.343 1.00105.65 C
ATOM 22 N2 G B2624 131.169 1.313 224.205 1.00105.87 N
ATOM 23 N3 G B2624 132.939 1.627 225.719 1.00105.47 N
ATOM 24 C4 G B2624 133.444 1.172 226.899 1.00105.27 C
ATOM 25 P A B2625 136.281 6.753 229.576 1.00126.37 P
ATOM 26 OP1 A B2625 136.150 6.162 230.929 1.00126.22 O
ATOM 27 OP2 A B2625 135.046 7.226 228.874 1.00126.54 O
ATOM 28 O5' A B2625 137.367 7.911 229.581 1.00126.28 O
TER

Atoms:
OP1: (137.023,5.201,219.980)
OP2: (136.261,6.313,222.167)
C3': (139.107,1.409,224.178)
C1': (136.873,0.705,224.467)
C5': (138.249,3.210,222.546)
O4': (136.805,2.087,224.148)
C8: (134.891,0.359,222.861)
O2': (138.580,-1.025,224.436)
C6: (133.217,-2.506,224.097)
C5: (133.996,-1.388,223.724)
C4: (135.106,-1.092,224.521)
P: (137.148,5.338,221.459)
C4': (138.157,2.599,223.929)
C2': (138.186,0.211,223.880)
C2: (134.748,-2.797,225.854)
N1: (133.639,-3.190,225.181)
N3: (135.556,-1.774,225.615)
N6: (132.123,-2.922,223.456)
N7: (133.883,-0.467,222.686)
N9: (135.677,0.033,223.943)
O5': (137.051,3.899,222.154)
O3': (139.518,1.408,225.564)
OP1: (137.646,0.581,231.043)
OP2: (139.349,-0.858,229.741)
C3': (136.481,4.319,228.641)
C1': (135.553,2.659,227.145)
C5': (138.506,2.871,229.236)
O6: (131.117,-1.423,227.843)
O4': (136.837,2.251,227.565)
C8: (134.651,0.837,228.699)
C2: (131.818,0.996,225.343)
C6: (131.728,-0.508,227.276)
C5: (132.922,0.159,227.694)
C4: (133.444,1.172,226.899)
P: (138.910,0.490,230.254)
C4': (137.554,3.361,228.164)
C2': (135.285,4.074,227.690)
O2': (135.302,4.992,226.600)
N1: (131.238,-0.019,226.066)
N2: (131.169,1.313,224.205)
N3: (132.939,1.627,225.719)
N7: (133.698,-0.044,228.833)
N9: (134.563,1.635,227.575)
O5': (138.866,1.516,229.040)
O3': (136.955,5.651,228.646)
Image (generated by PyMOL):
PyMOL image
show in jmol