Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GJW:F3:E16
Extra
PDB:
ATOM 1 O3' C A 2 15.234 -0.673 39.870 1.00179.29 O
ATOM 2 P A A 3 16.256 -0.335 41.093 1.00176.21 P
ATOM 3 OP1 A A 3 16.544 1.124 41.100 1.00176.15 O
ATOM 4 OP2 A A 3 17.392 -1.281 40.994 1.00176.26 O
ATOM 5 O5' A A 3 15.391 -0.672 42.410 1.00172.23 O
ATOM 6 C5' A A 3 15.758 -0.239 43.730 1.00166.16 C
ATOM 7 C4' A A 3 16.466 -1.327 44.531 1.00162.11 C
ATOM 8 O4' A A 3 15.978 -2.661 44.216 1.00161.44 O
ATOM 9 C3' A A 3 17.942 -1.506 44.224 1.00159.49 C
ATOM 10 O3' A A 3 18.761 -0.420 44.638 1.00155.38 O
ATOM 11 C2' A A 3 18.229 -2.819 44.947 1.00159.53 C
ATOM 12 O2' A A 3 18.275 -2.733 46.361 1.00159.85 O
ATOM 13 C1' A A 3 17.013 -3.607 44.477 1.00159.84 C
ATOM 14 N9 A A 3 17.324 -4.395 43.283 1.00158.98 N
ATOM 15 C8 A A 3 17.007 -4.107 41.985 1.00158.68 C
ATOM 16 N7 A A 3 17.424 -4.997 41.119 1.00157.98 N
ATOM 17 C5 A A 3 18.063 -5.937 41.906 1.00157.66 C
ATOM 18 C6 A A 3 18.725 -7.139 41.595 1.00157.11 C
ATOM 19 N6 A A 3 18.841 -7.590 40.346 1.00156.78 N
ATOM 20 N1 A A 3 19.261 -7.858 42.607 1.00157.05 N
ATOM 21 C2 A A 3 19.141 -7.394 43.857 1.00157.60 C
ATOM 22 N3 A A 3 18.541 -6.276 44.272 1.00158.08 N
ATOM 23 C4 A A 3 18.020 -5.584 43.240 1.00158.23 C
ATOM 24 P G A 4 20.067 -0.131 43.758 1.00152.10 P
ATOM 25 OP1 G A 4 20.443 1.292 43.900 1.00152.97 O
ATOM 26 OP2 G A 4 19.825 -0.690 42.405 1.00152.66 O
ATOM 27 O5' G A 4 21.173 -1.022 44.499 1.00147.63 O
TER
ATOM 1 O3' U B 15 20.485 -14.121 48.351 1.00136.75 O
ATOM 2 P G B 16 19.247 -15.110 48.113 1.00137.61 P
ATOM 3 OP1 G B 16 19.739 -16.466 48.448 1.00137.25 O
ATOM 4 OP2 G B 16 18.730 -14.862 46.753 1.00136.87 O
ATOM 5 O5' G B 16 17.992 -14.725 49.051 1.00139.52 O
ATOM 6 C5' G B 16 17.743 -13.748 50.058 1.00143.43 C
ATOM 7 C4' G B 16 17.294 -12.337 49.664 1.00147.43 C
ATOM 8 O4' G B 16 18.222 -11.743 48.713 1.00146.79 O
ATOM 9 C3' G B 16 15.935 -12.072 49.001 1.00150.10 C
ATOM 10 O3' G B 16 14.779 -12.213 49.828 1.00155.70 O
ATOM 11 C2' G B 16 16.131 -10.621 48.549 1.00148.71 C
ATOM 12 O2' G B 16 15.996 -9.626 49.555 1.00146.17 O
ATOM 13 C1' G B 16 17.555 -10.715 47.998 1.00147.51 C
ATOM 14 N9 G B 16 17.454 -11.101 46.600 1.00147.47 N
ATOM 15 C8 G B 16 17.707 -12.325 46.035 1.00147.27 C
ATOM 16 N7 G B 16 17.489 -12.366 44.751 1.00147.84 N
ATOM 17 C5 G B 16 17.049 -11.087 44.446 1.00148.13 C
ATOM 18 C6 G B 16 16.659 -10.523 43.206 1.00148.54 C
ATOM 19 O6 G B 16 16.622 -11.062 42.087 1.00148.50 O
ATOM 20 N1 G B 16 16.287 -9.186 43.355 1.00149.15 N
ATOM 21 C2 G B 16 16.284 -8.491 44.547 1.00149.33 C
ATOM 22 N2 G B 16 15.890 -7.214 44.500 1.00149.98 N
ATOM 23 N3 G B 16 16.650 -9.006 45.709 1.00148.78 N
ATOM 24 C4 G B 16 17.016 -10.302 45.579 1.00148.01 C
ATOM 25 P C B 17 13.490 -12.926 49.189 1.00158.35 P
ATOM 26 OP1 C B 17 13.512 -14.333 49.662 1.00157.28 O
ATOM 27 OP2 C B 17 13.434 -12.621 47.739 1.00156.89 O
ATOM 28 O5' C B 17 12.252 -12.179 49.865 1.00161.51 O
TER
ATOM 2 P A A 3 16.256 -0.335 41.093 1.00176.21 P
ATOM 3 OP1 A A 3 16.544 1.124 41.100 1.00176.15 O
ATOM 4 OP2 A A 3 17.392 -1.281 40.994 1.00176.26 O
ATOM 5 O5' A A 3 15.391 -0.672 42.410 1.00172.23 O
ATOM 6 C5' A A 3 15.758 -0.239 43.730 1.00166.16 C
ATOM 7 C4' A A 3 16.466 -1.327 44.531 1.00162.11 C
ATOM 8 O4' A A 3 15.978 -2.661 44.216 1.00161.44 O
ATOM 9 C3' A A 3 17.942 -1.506 44.224 1.00159.49 C
ATOM 10 O3' A A 3 18.761 -0.420 44.638 1.00155.38 O
ATOM 11 C2' A A 3 18.229 -2.819 44.947 1.00159.53 C
ATOM 12 O2' A A 3 18.275 -2.733 46.361 1.00159.85 O
ATOM 13 C1' A A 3 17.013 -3.607 44.477 1.00159.84 C
ATOM 14 N9 A A 3 17.324 -4.395 43.283 1.00158.98 N
ATOM 15 C8 A A 3 17.007 -4.107 41.985 1.00158.68 C
ATOM 16 N7 A A 3 17.424 -4.997 41.119 1.00157.98 N
ATOM 17 C5 A A 3 18.063 -5.937 41.906 1.00157.66 C
ATOM 18 C6 A A 3 18.725 -7.139 41.595 1.00157.11 C
ATOM 19 N6 A A 3 18.841 -7.590 40.346 1.00156.78 N
ATOM 20 N1 A A 3 19.261 -7.858 42.607 1.00157.05 N
ATOM 21 C2 A A 3 19.141 -7.394 43.857 1.00157.60 C
ATOM 22 N3 A A 3 18.541 -6.276 44.272 1.00158.08 N
ATOM 23 C4 A A 3 18.020 -5.584 43.240 1.00158.23 C
ATOM 24 P G A 4 20.067 -0.131 43.758 1.00152.10 P
ATOM 25 OP1 G A 4 20.443 1.292 43.900 1.00152.97 O
ATOM 26 OP2 G A 4 19.825 -0.690 42.405 1.00152.66 O
ATOM 27 O5' G A 4 21.173 -1.022 44.499 1.00147.63 O
TER
ATOM 1 O3' U B 15 20.485 -14.121 48.351 1.00136.75 O
ATOM 2 P G B 16 19.247 -15.110 48.113 1.00137.61 P
ATOM 3 OP1 G B 16 19.739 -16.466 48.448 1.00137.25 O
ATOM 4 OP2 G B 16 18.730 -14.862 46.753 1.00136.87 O
ATOM 5 O5' G B 16 17.992 -14.725 49.051 1.00139.52 O
ATOM 6 C5' G B 16 17.743 -13.748 50.058 1.00143.43 C
ATOM 7 C4' G B 16 17.294 -12.337 49.664 1.00147.43 C
ATOM 8 O4' G B 16 18.222 -11.743 48.713 1.00146.79 O
ATOM 9 C3' G B 16 15.935 -12.072 49.001 1.00150.10 C
ATOM 10 O3' G B 16 14.779 -12.213 49.828 1.00155.70 O
ATOM 11 C2' G B 16 16.131 -10.621 48.549 1.00148.71 C
ATOM 12 O2' G B 16 15.996 -9.626 49.555 1.00146.17 O
ATOM 13 C1' G B 16 17.555 -10.715 47.998 1.00147.51 C
ATOM 14 N9 G B 16 17.454 -11.101 46.600 1.00147.47 N
ATOM 15 C8 G B 16 17.707 -12.325 46.035 1.00147.27 C
ATOM 16 N7 G B 16 17.489 -12.366 44.751 1.00147.84 N
ATOM 17 C5 G B 16 17.049 -11.087 44.446 1.00148.13 C
ATOM 18 C6 G B 16 16.659 -10.523 43.206 1.00148.54 C
ATOM 19 O6 G B 16 16.622 -11.062 42.087 1.00148.50 O
ATOM 20 N1 G B 16 16.287 -9.186 43.355 1.00149.15 N
ATOM 21 C2 G B 16 16.284 -8.491 44.547 1.00149.33 C
ATOM 22 N2 G B 16 15.890 -7.214 44.500 1.00149.98 N
ATOM 23 N3 G B 16 16.650 -9.006 45.709 1.00148.78 N
ATOM 24 C4 G B 16 17.016 -10.302 45.579 1.00148.01 C
ATOM 25 P C B 17 13.490 -12.926 49.189 1.00158.35 P
ATOM 26 OP1 C B 17 13.512 -14.333 49.662 1.00157.28 O
ATOM 27 OP2 C B 17 13.434 -12.621 47.739 1.00156.89 O
ATOM 28 O5' C B 17 12.252 -12.179 49.865 1.00161.51 O
TER
Atoms:
OP1: (16.544,1.124,41.100)
OP2: (17.392,-1.281,40.994)
C3': (17.942,-1.506,44.224)
C1': (17.013,-3.607,44.477)
C5': (15.758,-0.239,43.730)
O4': (15.978,-2.661,44.216)
C8: (17.007,-4.107,41.985)
O2': (18.275,-2.733,46.361)
C6: (18.725,-7.139,41.595)
C5: (18.063,-5.937,41.906)
C4: (18.020,-5.584,43.240)
P: (16.256,-0.335,41.093)
C4': (16.466,-1.327,44.531)
C2': (18.229,-2.819,44.947)
C2: (19.141,-7.394,43.857)
N1: (19.261,-7.858,42.607)
N3: (18.541,-6.276,44.272)
N6: (18.841,-7.590,40.346)
N7: (17.424,-4.997,41.119)
N9: (17.324,-4.395,43.283)
O5': (15.391,-0.672,42.410)
O3': (18.761,-0.420,44.638)
OP2: (17.392,-1.281,40.994)
C3': (17.942,-1.506,44.224)
C1': (17.013,-3.607,44.477)
C5': (15.758,-0.239,43.730)
O4': (15.978,-2.661,44.216)
C8: (17.007,-4.107,41.985)
O2': (18.275,-2.733,46.361)
C6: (18.725,-7.139,41.595)
C5: (18.063,-5.937,41.906)
C4: (18.020,-5.584,43.240)
P: (16.256,-0.335,41.093)
C4': (16.466,-1.327,44.531)
C2': (18.229,-2.819,44.947)
C2: (19.141,-7.394,43.857)
N1: (19.261,-7.858,42.607)
N3: (18.541,-6.276,44.272)
N6: (18.841,-7.590,40.346)
N7: (17.424,-4.997,41.119)
N9: (17.324,-4.395,43.283)
O5': (15.391,-0.672,42.410)
O3': (18.761,-0.420,44.638)
OP1: (19.739,-16.466,48.448)
OP2: (18.730,-14.862,46.753)
C3': (15.935,-12.072,49.001)
C1': (17.555,-10.715,47.998)
C5': (17.743,-13.748,50.058)
O6: (16.622,-11.062,42.087)
O4': (18.222,-11.743,48.713)
C8: (17.707,-12.325,46.035)
C2: (16.284,-8.491,44.547)
C6: (16.659,-10.523,43.206)
C5: (17.049,-11.087,44.446)
C4: (17.016,-10.302,45.579)
P: (19.247,-15.110,48.113)
C4': (17.294,-12.337,49.664)
C2': (16.131,-10.621,48.549)
O2': (15.996,-9.626,49.555)
N1: (16.287,-9.186,43.355)
N2: (15.890,-7.214,44.500)
N3: (16.650,-9.006,45.709)
N7: (17.489,-12.366,44.751)
N9: (17.454,-11.101,46.600)
O5': (17.992,-14.725,49.051)
O3': (14.779,-12.213,49.828)
OP2: (18.730,-14.862,46.753)
C3': (15.935,-12.072,49.001)
C1': (17.555,-10.715,47.998)
C5': (17.743,-13.748,50.058)
O6: (16.622,-11.062,42.087)
O4': (18.222,-11.743,48.713)
C8: (17.707,-12.325,46.035)
C2: (16.284,-8.491,44.547)
C6: (16.659,-10.523,43.206)
C5: (17.049,-11.087,44.446)
C4: (17.016,-10.302,45.579)
P: (19.247,-15.110,48.113)
C4': (17.294,-12.337,49.664)
C2': (16.131,-10.621,48.549)
O2': (15.996,-9.626,49.555)
N1: (16.287,-9.186,43.355)
N2: (15.890,-7.214,44.500)
N3: (16.650,-9.006,45.709)
N7: (17.489,-12.366,44.751)
N9: (17.454,-11.101,46.600)
O5': (17.992,-14.725,49.051)
O3': (14.779,-12.213,49.828)
Image (generated by PyMOL):