Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1250:A1252
Extra
PDB:
ATOM 1 O3' U A1249 31.468 -43.498 -0.435 1.00 45.80 O
ATOM 2 P A A1250 32.512 -44.691 -0.193 1.00 38.40 P
ATOM 3 OP1 A A1250 33.277 -44.352 1.042 1.00 62.90 O
ATOM 4 OP2 A A1250 33.254 -44.878 -1.466 1.00 40.35 O
ATOM 5 O5' A A1250 31.590 -45.935 0.078 1.00 30.09 O
ATOM 6 C5' A A1250 30.925 -46.562 -0.981 1.00 36.43 C
ATOM 7 C4' A A1250 31.023 -48.048 -0.896 1.00 33.68 C
ATOM 8 O4' A A1250 29.854 -48.555 -0.184 1.00 31.89 O
ATOM 9 C3' A A1250 31.000 -48.728 -2.247 1.00 35.00 C
ATOM 10 O3' A A1250 31.590 -50.026 -2.125 1.00 45.37 O
ATOM 11 C2' A A1250 29.508 -48.865 -2.464 1.00 32.97 C
ATOM 12 O2' A A1250 29.134 -49.776 -3.467 1.00 55.42 O
ATOM 13 C1' A A1250 29.074 -49.322 -1.076 1.00 33.58 C
ATOM 14 N9 A A1250 27.652 -49.104 -0.792 1.00 32.17 N
ATOM 15 C8 A A1250 26.783 -50.037 -0.315 1.00 37.10 C
ATOM 16 N7 A A1250 25.557 -49.623 -0.184 1.00 39.07 N
ATOM 17 C5 A A1250 25.608 -48.327 -0.639 1.00 37.59 C
ATOM 18 C6 A A1250 24.613 -47.347 -0.759 1.00 39.11 C
ATOM 19 N6 A A1250 23.334 -47.511 -0.422 1.00 40.04 N
ATOM 20 N1 A A1250 24.997 -46.157 -1.236 1.00 39.85 N
ATOM 21 C2 A A1250 26.285 -45.977 -1.560 1.00 40.15 C
ATOM 22 N3 A A1250 27.301 -46.824 -1.493 1.00 40.98 N
ATOM 23 C4 A A1250 26.890 -47.998 -1.016 1.00 35.77 C
ATOM 24 P A A1251 33.141 -50.289 -2.509 1.00 42.67 P
ATOM 25 OP1 A A1251 33.932 -50.133 -1.266 1.00 29.42 O
ATOM 26 OP2 A A1251 33.474 -49.436 -3.694 1.00 35.04 O
ATOM 27 O5' A A1251 33.102 -51.800 -2.948 1.00 34.51 O
TER
ATOM 1 O3' A B1251 28.943 -53.735 -3.017 1.00 37.51 O
ATOM 2 P G B1252 28.180 -53.790 -4.432 1.00 40.01 P
ATOM 3 OP1 G B1252 28.132 -55.223 -4.851 1.00 25.84 O
ATOM 4 OP2 G B1252 28.834 -52.799 -5.328 1.00 28.53 O
ATOM 5 O5' G B1252 26.720 -53.284 -4.073 1.00 44.02 O
ATOM 6 C5' G B1252 25.811 -54.102 -3.362 1.00 36.75 C
ATOM 7 C4' G B1252 24.480 -53.424 -3.242 1.00 34.63 C
ATOM 8 O4' G B1252 24.609 -52.251 -2.398 1.00 38.89 O
ATOM 9 C3' G B1252 23.895 -52.894 -4.548 1.00 32.39 C
ATOM 10 O3' G B1252 23.169 -53.881 -5.257 1.00 43.34 O
ATOM 11 C2' G B1252 23.028 -51.735 -4.084 1.00 38.43 C
ATOM 12 O2' G B1252 21.781 -52.198 -3.575 1.00 34.30 O
ATOM 13 C1' G B1252 23.850 -51.189 -2.923 1.00 39.56 C
ATOM 14 N9 G B1252 24.772 -50.141 -3.364 1.00 35.14 N
ATOM 15 C8 G B1252 26.118 -50.157 -3.270 1.00 33.53 C
ATOM 16 N7 G B1252 26.642 -49.074 -3.758 1.00 39.44 N
ATOM 17 C5 G B1252 25.580 -48.301 -4.196 1.00 38.22 C
ATOM 18 C6 G B1252 25.525 -47.009 -4.811 1.00 40.87 C
ATOM 19 O6 G B1252 26.446 -46.231 -5.130 1.00 40.63 O
ATOM 20 N1 G B1252 24.221 -46.626 -5.081 1.00 36.49 N
ATOM 21 C2 G B1252 23.115 -47.377 -4.796 1.00 37.56 C
ATOM 22 N2 G B1252 21.916 -46.882 -5.126 1.00 40.02 N
ATOM 23 N3 G B1252 23.170 -48.554 -4.213 1.00 42.13 N
ATOM 24 C4 G B1252 24.420 -48.960 -3.947 1.00 36.53 C
ATOM 25 P C B1253 23.294 -54.000 -6.844 1.00 50.79 P
ATOM 26 OP1 C B1253 22.554 -55.219 -7.252 1.00 46.13 O
ATOM 27 OP2 C B1253 24.730 -53.892 -7.173 1.00 64.39 O
ATOM 28 O5' C B1253 22.526 -52.708 -7.343 1.00 40.08 O
TER
ATOM 2 P A A1250 32.512 -44.691 -0.193 1.00 38.40 P
ATOM 3 OP1 A A1250 33.277 -44.352 1.042 1.00 62.90 O
ATOM 4 OP2 A A1250 33.254 -44.878 -1.466 1.00 40.35 O
ATOM 5 O5' A A1250 31.590 -45.935 0.078 1.00 30.09 O
ATOM 6 C5' A A1250 30.925 -46.562 -0.981 1.00 36.43 C
ATOM 7 C4' A A1250 31.023 -48.048 -0.896 1.00 33.68 C
ATOM 8 O4' A A1250 29.854 -48.555 -0.184 1.00 31.89 O
ATOM 9 C3' A A1250 31.000 -48.728 -2.247 1.00 35.00 C
ATOM 10 O3' A A1250 31.590 -50.026 -2.125 1.00 45.37 O
ATOM 11 C2' A A1250 29.508 -48.865 -2.464 1.00 32.97 C
ATOM 12 O2' A A1250 29.134 -49.776 -3.467 1.00 55.42 O
ATOM 13 C1' A A1250 29.074 -49.322 -1.076 1.00 33.58 C
ATOM 14 N9 A A1250 27.652 -49.104 -0.792 1.00 32.17 N
ATOM 15 C8 A A1250 26.783 -50.037 -0.315 1.00 37.10 C
ATOM 16 N7 A A1250 25.557 -49.623 -0.184 1.00 39.07 N
ATOM 17 C5 A A1250 25.608 -48.327 -0.639 1.00 37.59 C
ATOM 18 C6 A A1250 24.613 -47.347 -0.759 1.00 39.11 C
ATOM 19 N6 A A1250 23.334 -47.511 -0.422 1.00 40.04 N
ATOM 20 N1 A A1250 24.997 -46.157 -1.236 1.00 39.85 N
ATOM 21 C2 A A1250 26.285 -45.977 -1.560 1.00 40.15 C
ATOM 22 N3 A A1250 27.301 -46.824 -1.493 1.00 40.98 N
ATOM 23 C4 A A1250 26.890 -47.998 -1.016 1.00 35.77 C
ATOM 24 P A A1251 33.141 -50.289 -2.509 1.00 42.67 P
ATOM 25 OP1 A A1251 33.932 -50.133 -1.266 1.00 29.42 O
ATOM 26 OP2 A A1251 33.474 -49.436 -3.694 1.00 35.04 O
ATOM 27 O5' A A1251 33.102 -51.800 -2.948 1.00 34.51 O
TER
ATOM 1 O3' A B1251 28.943 -53.735 -3.017 1.00 37.51 O
ATOM 2 P G B1252 28.180 -53.790 -4.432 1.00 40.01 P
ATOM 3 OP1 G B1252 28.132 -55.223 -4.851 1.00 25.84 O
ATOM 4 OP2 G B1252 28.834 -52.799 -5.328 1.00 28.53 O
ATOM 5 O5' G B1252 26.720 -53.284 -4.073 1.00 44.02 O
ATOM 6 C5' G B1252 25.811 -54.102 -3.362 1.00 36.75 C
ATOM 7 C4' G B1252 24.480 -53.424 -3.242 1.00 34.63 C
ATOM 8 O4' G B1252 24.609 -52.251 -2.398 1.00 38.89 O
ATOM 9 C3' G B1252 23.895 -52.894 -4.548 1.00 32.39 C
ATOM 10 O3' G B1252 23.169 -53.881 -5.257 1.00 43.34 O
ATOM 11 C2' G B1252 23.028 -51.735 -4.084 1.00 38.43 C
ATOM 12 O2' G B1252 21.781 -52.198 -3.575 1.00 34.30 O
ATOM 13 C1' G B1252 23.850 -51.189 -2.923 1.00 39.56 C
ATOM 14 N9 G B1252 24.772 -50.141 -3.364 1.00 35.14 N
ATOM 15 C8 G B1252 26.118 -50.157 -3.270 1.00 33.53 C
ATOM 16 N7 G B1252 26.642 -49.074 -3.758 1.00 39.44 N
ATOM 17 C5 G B1252 25.580 -48.301 -4.196 1.00 38.22 C
ATOM 18 C6 G B1252 25.525 -47.009 -4.811 1.00 40.87 C
ATOM 19 O6 G B1252 26.446 -46.231 -5.130 1.00 40.63 O
ATOM 20 N1 G B1252 24.221 -46.626 -5.081 1.00 36.49 N
ATOM 21 C2 G B1252 23.115 -47.377 -4.796 1.00 37.56 C
ATOM 22 N2 G B1252 21.916 -46.882 -5.126 1.00 40.02 N
ATOM 23 N3 G B1252 23.170 -48.554 -4.213 1.00 42.13 N
ATOM 24 C4 G B1252 24.420 -48.960 -3.947 1.00 36.53 C
ATOM 25 P C B1253 23.294 -54.000 -6.844 1.00 50.79 P
ATOM 26 OP1 C B1253 22.554 -55.219 -7.252 1.00 46.13 O
ATOM 27 OP2 C B1253 24.730 -53.892 -7.173 1.00 64.39 O
ATOM 28 O5' C B1253 22.526 -52.708 -7.343 1.00 40.08 O
TER
Atoms:
OP1: (33.277,-44.352,1.042)
OP2: (33.254,-44.878,-1.466)
C3': (31.000,-48.728,-2.247)
C1': (29.074,-49.322,-1.076)
C5': (30.925,-46.562,-0.981)
O4': (29.854,-48.555,-0.184)
C8: (26.783,-50.037,-0.315)
O2': (29.134,-49.776,-3.467)
C6: (24.613,-47.347,-0.759)
C5: (25.608,-48.327,-0.639)
C4: (26.890,-47.998,-1.016)
P: (32.512,-44.691,-0.193)
C4': (31.023,-48.048,-0.896)
C2': (29.508,-48.865,-2.464)
C2: (26.285,-45.977,-1.560)
N1: (24.997,-46.157,-1.236)
N3: (27.301,-46.824,-1.493)
N6: (23.334,-47.511,-0.422)
N7: (25.557,-49.623,-0.184)
N9: (27.652,-49.104,-0.792)
O5': (31.590,-45.935,0.078)
O3': (31.590,-50.026,-2.125)
OP2: (33.254,-44.878,-1.466)
C3': (31.000,-48.728,-2.247)
C1': (29.074,-49.322,-1.076)
C5': (30.925,-46.562,-0.981)
O4': (29.854,-48.555,-0.184)
C8: (26.783,-50.037,-0.315)
O2': (29.134,-49.776,-3.467)
C6: (24.613,-47.347,-0.759)
C5: (25.608,-48.327,-0.639)
C4: (26.890,-47.998,-1.016)
P: (32.512,-44.691,-0.193)
C4': (31.023,-48.048,-0.896)
C2': (29.508,-48.865,-2.464)
C2: (26.285,-45.977,-1.560)
N1: (24.997,-46.157,-1.236)
N3: (27.301,-46.824,-1.493)
N6: (23.334,-47.511,-0.422)
N7: (25.557,-49.623,-0.184)
N9: (27.652,-49.104,-0.792)
O5': (31.590,-45.935,0.078)
O3': (31.590,-50.026,-2.125)
OP1: (28.132,-55.223,-4.851)
OP2: (28.834,-52.799,-5.328)
C3': (23.895,-52.894,-4.548)
C1': (23.850,-51.189,-2.923)
C5': (25.811,-54.102,-3.362)
O6: (26.446,-46.231,-5.130)
O4': (24.609,-52.251,-2.398)
C8: (26.118,-50.157,-3.270)
C2: (23.115,-47.377,-4.796)
C6: (25.525,-47.009,-4.811)
C5: (25.580,-48.301,-4.196)
C4: (24.420,-48.960,-3.947)
P: (28.180,-53.790,-4.432)
C4': (24.480,-53.424,-3.242)
C2': (23.028,-51.735,-4.084)
O2': (21.781,-52.198,-3.575)
N1: (24.221,-46.626,-5.081)
N2: (21.916,-46.882,-5.126)
N3: (23.170,-48.554,-4.213)
N7: (26.642,-49.074,-3.758)
N9: (24.772,-50.141,-3.364)
O5': (26.720,-53.284,-4.073)
O3': (23.169,-53.881,-5.257)
OP2: (28.834,-52.799,-5.328)
C3': (23.895,-52.894,-4.548)
C1': (23.850,-51.189,-2.923)
C5': (25.811,-54.102,-3.362)
O6: (26.446,-46.231,-5.130)
O4': (24.609,-52.251,-2.398)
C8: (26.118,-50.157,-3.270)
C2: (23.115,-47.377,-4.796)
C6: (25.525,-47.009,-4.811)
C5: (25.580,-48.301,-4.196)
C4: (24.420,-48.960,-3.947)
P: (28.180,-53.790,-4.432)
C4': (24.480,-53.424,-3.242)
C2': (23.028,-51.735,-4.084)
O2': (21.781,-52.198,-3.575)
N1: (24.221,-46.626,-5.081)
N2: (21.916,-46.882,-5.126)
N3: (23.170,-48.554,-4.213)
N7: (26.642,-49.074,-3.758)
N9: (24.772,-50.141,-3.364)
O5': (26.720,-53.284,-4.073)
O3': (23.169,-53.881,-5.257)
Image (generated by PyMOL):