ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1CSL:B7:A5

Extra

PDB:
ATOM 1 O3' G A 6 28.307 2.753 17.718 1.00 12.92 O
ATOM 2 P G A 7 29.615 1.870 17.417 1.00 13.06 P
ATOM 3 OP1 G A 7 30.692 2.366 18.325 1.00 13.09 O
ATOM 4 OP2 G A 7 29.867 1.808 15.955 1.00 13.08 O
ATOM 5 O5' G A 7 29.210 0.402 17.889 1.00 13.17 O
ATOM 6 C5' G A 7 28.735 0.156 19.224 1.00 13.39 C
ATOM 7 C4' G A 7 28.297 -1.285 19.370 1.00 13.56 C
ATOM 8 O4' G A 7 27.179 -1.546 18.466 1.00 13.50 O
ATOM 9 C3' G A 7 29.363 -2.345 19.053 1.00 13.72 C
ATOM 10 O3' G A 7 29.183 -3.455 19.934 1.00 14.12 O
ATOM 11 C2' G A 7 28.954 -2.815 17.658 1.00 13.60 C
ATOM 12 O2' G A 7 29.353 -4.131 17.313 1.00 13.61 O
ATOM 13 C1' G A 7 27.437 -2.747 17.781 1.00 13.47 C
ATOM 14 N9 G A 7 26.694 -2.804 16.527 1.00 13.28 N
ATOM 15 C8 G A 7 25.742 -3.739 16.210 1.00 13.22 C
ATOM 16 N7 G A 7 25.303 -3.631 14.987 1.00 13.09 N
ATOM 17 C5 G A 7 25.995 -2.547 14.467 1.00 13.08 C
ATOM 18 C6 G A 7 25.954 -1.975 13.174 1.00 13.05 C
ATOM 19 O6 G A 7 25.294 -2.344 12.192 1.00 12.97 O
ATOM 20 N1 G A 7 26.799 -0.873 13.075 1.00 13.02 N
ATOM 21 C2 G A 7 27.596 -0.395 14.089 1.00 13.08 C
ATOM 22 N2 G A 7 28.349 0.684 13.799 1.00 13.07 N
ATOM 23 N3 G A 7 27.654 -0.934 15.296 1.00 13.08 N
ATOM 24 C4 G A 7 26.835 -2.000 15.414 1.00 13.16 C
ATOM 25 P U A 8 30.250 -3.758 21.100 1.00 14.44 P
ATOM 26 OP1 U A 8 29.642 -4.850 21.913 1.00 14.49 O
ATOM 27 OP2 U A 8 30.629 -2.481 21.753 1.00 14.48 O
ATOM 28 O5' U A 8 31.522 -4.356 20.345 1.00 14.73 O
TER

ATOM 1 O3' G B 4 19.004 -9.989 5.424 1.00 11.92 O
ATOM 2 P G B 5 18.025 -9.211 6.434 1.00 12.19 P
ATOM 3 OP1 G B 5 16.746 -9.962 6.449 1.00 12.18 O
ATOM 4 OP2 G B 5 18.025 -7.755 6.124 1.00 12.18 O
ATOM 5 O5' G B 5 18.719 -9.378 7.857 1.00 12.31 O
ATOM 6 C5' G B 5 18.882 -10.671 8.451 1.00 12.58 C
ATOM 7 C4' G B 5 19.584 -10.546 9.780 1.00 12.77 C
ATOM 8 O4' G B 5 20.929 -10.042 9.585 1.00 12.77 O
ATOM 9 C3' G B 5 18.967 -9.578 10.775 1.00 12.92 C
ATOM 10 O3' G B 5 17.875 -10.170 11.462 1.00 13.18 O
ATOM 11 C2' G B 5 20.146 -9.275 11.691 1.00 12.86 C
ATOM 12 O2' G B 5 20.372 -10.324 12.612 1.00 12.88 O
ATOM 13 C1' G B 5 21.307 -9.250 10.699 1.00 12.81 C
ATOM 14 N9 G B 5 21.603 -7.894 10.237 1.00 12.75 N
ATOM 15 C8 G B 5 21.180 -7.294 9.075 1.00 12.73 C
ATOM 16 N7 G B 5 21.603 -6.064 8.948 1.00 12.72 N
ATOM 17 C5 G B 5 22.354 -5.837 10.094 1.00 12.69 C
ATOM 18 C6 G B 5 23.067 -4.681 10.515 1.00 12.70 C
ATOM 19 O6 G B 5 23.195 -3.595 9.930 1.00 12.65 O
ATOM 20 N1 G B 5 23.678 -4.880 11.750 1.00 12.67 N
ATOM 21 C2 G B 5 23.622 -6.041 12.481 1.00 12.72 C
ATOM 22 N2 G B 5 24.274 -6.037 13.653 1.00 12.71 N
ATOM 23 N3 G B 5 22.971 -7.129 12.094 1.00 12.71 N
ATOM 24 C4 G B 5 22.363 -6.956 10.902 1.00 12.73 C
ATOM 25 P C B 6 16.611 -9.270 11.885 1.00 13.41 P
ATOM 26 OP1 C B 6 15.530 -10.236 12.218 1.00 13.43 O
ATOM 27 OP2 C B 6 16.350 -8.188 10.892 1.00 13.39 O
ATOM 28 O5' C B 6 17.074 -8.562 13.232 1.00 13.52 O
TER

Atoms:
OP1: (30.692,2.366,18.325)
OP2: (29.867,1.808,15.955)
C3': (29.363,-2.345,19.053)
C1': (27.437,-2.747,17.781)
C5': (28.735,0.156,19.224)
O6: (25.294,-2.344,12.192)
O4': (27.179,-1.546,18.466)
C8: (25.742,-3.739,16.210)
C2: (27.596,-0.395,14.089)
C6: (25.954,-1.975,13.174)
C5: (25.995,-2.547,14.467)
C4: (26.835,-2.000,15.414)
P: (29.615,1.870,17.417)
C4': (28.297,-1.285,19.370)
C2': (28.954,-2.815,17.658)
O2': (29.353,-4.131,17.313)
N1: (26.799,-0.873,13.075)
N2: (28.349,0.684,13.799)
N3: (27.654,-0.934,15.296)
N7: (25.303,-3.631,14.987)
N9: (26.694,-2.804,16.527)
O5': (29.210,0.402,17.889)
O3': (29.183,-3.455,19.934)
OP1: (16.746,-9.962,6.449)
OP2: (18.025,-7.755,6.124)
C3': (18.967,-9.578,10.775)
C1': (21.307,-9.250,10.699)
C5': (18.882,-10.671,8.451)
O6: (23.195,-3.595,9.930)
O4': (20.929,-10.042,9.585)
C8: (21.180,-7.294,9.075)
C2: (23.622,-6.041,12.481)
C6: (23.067,-4.681,10.515)
C5: (22.354,-5.837,10.094)
C4: (22.363,-6.956,10.902)
P: (18.025,-9.211,6.434)
C4': (19.584,-10.546,9.780)
C2': (20.146,-9.275,11.691)
O2': (20.372,-10.324,12.612)
N1: (23.678,-4.880,11.750)
N2: (24.274,-6.037,13.653)
N3: (22.971,-7.129,12.094)
N7: (21.603,-6.064,8.948)
N9: (21.603,-7.894,10.237)
O5': (18.719,-9.378,7.857)
O3': (17.875,-10.170,11.462)
Image (generated by PyMOL):
PyMOL image
show in jmol