Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DUQ:D7:C5
Extra
PDB:
ATOM 1 O3' G A 6 -7.789 12.898 7.719 1.00 47.35 O
ATOM 2 P G A 7 -6.838 12.417 6.499 1.00 49.79 P
ATOM 3 OP1 G A 7 -7.358 12.910 5.198 1.00 51.99 O
ATOM 4 OP2 G A 7 -6.576 10.973 6.669 1.00 51.30 O
ATOM 5 O5' G A 7 -5.415 13.077 6.744 1.00 49.08 O
ATOM 6 C5' G A 7 -5.230 14.381 7.282 1.00 40.45 C
ATOM 7 C4' G A 7 -3.771 14.525 7.600 1.00 48.78 C
ATOM 8 O4' G A 7 -3.461 13.771 8.800 1.00 42.48 O
ATOM 9 C3' G A 7 -2.927 13.853 6.514 1.00 57.23 C
ATOM 10 O3' G A 7 -2.705 14.674 5.345 1.00 64.63 O
ATOM 11 C2' G A 7 -1.714 13.232 7.223 1.00 52.76 C
ATOM 12 O2' G A 7 -0.469 13.869 7.023 1.00 67.40 O
ATOM 13 C1' G A 7 -2.135 13.282 8.695 1.00 50.41 C
ATOM 14 N9 G A 7 -1.974 12.078 9.500 1.00 38.61 N
ATOM 15 C8 G A 7 -0.944 11.838 10.361 1.00 28.58 C
ATOM 16 N7 G A 7 -1.054 10.712 10.994 1.00 35.48 N
ATOM 17 C5 G A 7 -2.225 10.156 10.499 1.00 38.10 C
ATOM 18 C6 G A 7 -2.859 8.936 10.820 1.00 29.01 C
ATOM 19 O6 G A 7 -2.503 8.079 11.617 1.00 48.17 O
ATOM 20 N1 G A 7 -4.029 8.766 10.113 1.00 38.29 N
ATOM 21 C2 G A 7 -4.522 9.645 9.206 1.00 43.34 C
ATOM 22 N2 G A 7 -5.665 9.289 8.648 1.00 47.15 N
ATOM 23 N3 G A 7 -3.936 10.790 8.878 1.00 46.71 N
ATOM 24 C4 G A 7 -2.801 10.981 9.571 1.00 40.01 C
ATOM 25 P U A 8 -2.078 16.172 5.462 1.00 63.62 P
ATOM 26 OP1 U A 8 -1.201 16.346 6.649 1.00 61.05 O
ATOM 27 OP2 U A 8 -3.224 17.088 5.265 1.00 50.18 O
ATOM 28 O5' U A 8 -1.130 16.289 4.188 1.00 47.62 O
TER
ATOM 1 O3' G B 4 4.257 2.794 19.472 1.00 37.45 O
ATOM 2 P G B 5 3.440 3.974 20.198 1.00 43.22 P
ATOM 3 OP1 G B 5 4.036 4.137 21.547 1.00 52.52 O
ATOM 4 OP2 G B 5 1.992 3.648 20.065 1.00 43.55 O
ATOM 5 O5' G B 5 3.718 5.284 19.327 1.00 29.54 O
ATOM 6 C5' G B 5 5.054 5.760 19.131 1.00 40.35 C
ATOM 7 C4' G B 5 5.072 6.898 18.130 1.00 39.05 C
ATOM 8 O4' G B 5 4.743 6.413 16.808 1.00 45.84 O
ATOM 9 C3' G B 5 4.068 8.007 18.379 1.00 45.72 C
ATOM 10 O3' G B 5 4.596 8.930 19.323 1.00 51.98 O
ATOM 11 C2' G B 5 3.940 8.637 17.002 1.00 41.52 C
ATOM 12 O2' G B 5 5.005 9.513 16.711 1.00 47.78 O
ATOM 13 C1' G B 5 4.019 7.406 16.097 1.00 40.29 C
ATOM 14 N9 G B 5 2.702 6.866 15.780 1.00 40.54 N
ATOM 15 C8 G B 5 2.098 5.775 16.369 1.00 43.25 C
ATOM 16 N7 G B 5 0.889 5.559 15.929 1.00 44.13 N
ATOM 17 C5 G B 5 0.682 6.560 14.983 1.00 30.48 C
ATOM 18 C6 G B 5 -0.454 6.843 14.188 1.00 33.27 C
ATOM 19 O6 G B 5 -1.532 6.252 14.161 1.00 43.40 O
ATOM 20 N1 G B 5 -0.245 7.945 13.365 1.00 37.84 N
ATOM 21 C2 G B 5 0.926 8.687 13.316 1.00 47.27 C
ATOM 22 N2 G B 5 0.951 9.730 12.461 1.00 41.10 N
ATOM 23 N3 G B 5 1.990 8.429 14.053 1.00 42.20 N
ATOM 24 C4 G B 5 1.799 7.363 14.865 1.00 39.39 C
ATOM 25 P C B 6 3.618 9.670 20.355 1.00 44.84 P
ATOM 26 OP1 C B 6 4.529 10.220 21.390 1.00 53.53 O
ATOM 27 OP2 C B 6 2.480 8.797 20.757 1.00 41.49 O
ATOM 28 O5' C B 6 3.036 10.885 19.524 1.00 40.30 O
TER
ATOM 2 P G A 7 -6.838 12.417 6.499 1.00 49.79 P
ATOM 3 OP1 G A 7 -7.358 12.910 5.198 1.00 51.99 O
ATOM 4 OP2 G A 7 -6.576 10.973 6.669 1.00 51.30 O
ATOM 5 O5' G A 7 -5.415 13.077 6.744 1.00 49.08 O
ATOM 6 C5' G A 7 -5.230 14.381 7.282 1.00 40.45 C
ATOM 7 C4' G A 7 -3.771 14.525 7.600 1.00 48.78 C
ATOM 8 O4' G A 7 -3.461 13.771 8.800 1.00 42.48 O
ATOM 9 C3' G A 7 -2.927 13.853 6.514 1.00 57.23 C
ATOM 10 O3' G A 7 -2.705 14.674 5.345 1.00 64.63 O
ATOM 11 C2' G A 7 -1.714 13.232 7.223 1.00 52.76 C
ATOM 12 O2' G A 7 -0.469 13.869 7.023 1.00 67.40 O
ATOM 13 C1' G A 7 -2.135 13.282 8.695 1.00 50.41 C
ATOM 14 N9 G A 7 -1.974 12.078 9.500 1.00 38.61 N
ATOM 15 C8 G A 7 -0.944 11.838 10.361 1.00 28.58 C
ATOM 16 N7 G A 7 -1.054 10.712 10.994 1.00 35.48 N
ATOM 17 C5 G A 7 -2.225 10.156 10.499 1.00 38.10 C
ATOM 18 C6 G A 7 -2.859 8.936 10.820 1.00 29.01 C
ATOM 19 O6 G A 7 -2.503 8.079 11.617 1.00 48.17 O
ATOM 20 N1 G A 7 -4.029 8.766 10.113 1.00 38.29 N
ATOM 21 C2 G A 7 -4.522 9.645 9.206 1.00 43.34 C
ATOM 22 N2 G A 7 -5.665 9.289 8.648 1.00 47.15 N
ATOM 23 N3 G A 7 -3.936 10.790 8.878 1.00 46.71 N
ATOM 24 C4 G A 7 -2.801 10.981 9.571 1.00 40.01 C
ATOM 25 P U A 8 -2.078 16.172 5.462 1.00 63.62 P
ATOM 26 OP1 U A 8 -1.201 16.346 6.649 1.00 61.05 O
ATOM 27 OP2 U A 8 -3.224 17.088 5.265 1.00 50.18 O
ATOM 28 O5' U A 8 -1.130 16.289 4.188 1.00 47.62 O
TER
ATOM 1 O3' G B 4 4.257 2.794 19.472 1.00 37.45 O
ATOM 2 P G B 5 3.440 3.974 20.198 1.00 43.22 P
ATOM 3 OP1 G B 5 4.036 4.137 21.547 1.00 52.52 O
ATOM 4 OP2 G B 5 1.992 3.648 20.065 1.00 43.55 O
ATOM 5 O5' G B 5 3.718 5.284 19.327 1.00 29.54 O
ATOM 6 C5' G B 5 5.054 5.760 19.131 1.00 40.35 C
ATOM 7 C4' G B 5 5.072 6.898 18.130 1.00 39.05 C
ATOM 8 O4' G B 5 4.743 6.413 16.808 1.00 45.84 O
ATOM 9 C3' G B 5 4.068 8.007 18.379 1.00 45.72 C
ATOM 10 O3' G B 5 4.596 8.930 19.323 1.00 51.98 O
ATOM 11 C2' G B 5 3.940 8.637 17.002 1.00 41.52 C
ATOM 12 O2' G B 5 5.005 9.513 16.711 1.00 47.78 O
ATOM 13 C1' G B 5 4.019 7.406 16.097 1.00 40.29 C
ATOM 14 N9 G B 5 2.702 6.866 15.780 1.00 40.54 N
ATOM 15 C8 G B 5 2.098 5.775 16.369 1.00 43.25 C
ATOM 16 N7 G B 5 0.889 5.559 15.929 1.00 44.13 N
ATOM 17 C5 G B 5 0.682 6.560 14.983 1.00 30.48 C
ATOM 18 C6 G B 5 -0.454 6.843 14.188 1.00 33.27 C
ATOM 19 O6 G B 5 -1.532 6.252 14.161 1.00 43.40 O
ATOM 20 N1 G B 5 -0.245 7.945 13.365 1.00 37.84 N
ATOM 21 C2 G B 5 0.926 8.687 13.316 1.00 47.27 C
ATOM 22 N2 G B 5 0.951 9.730 12.461 1.00 41.10 N
ATOM 23 N3 G B 5 1.990 8.429 14.053 1.00 42.20 N
ATOM 24 C4 G B 5 1.799 7.363 14.865 1.00 39.39 C
ATOM 25 P C B 6 3.618 9.670 20.355 1.00 44.84 P
ATOM 26 OP1 C B 6 4.529 10.220 21.390 1.00 53.53 O
ATOM 27 OP2 C B 6 2.480 8.797 20.757 1.00 41.49 O
ATOM 28 O5' C B 6 3.036 10.885 19.524 1.00 40.30 O
TER
Atoms:
OP1: (-7.358,12.910,5.198)
OP2: (-6.576,10.973,6.669)
C3': (-2.927,13.853,6.514)
C1': (-2.135,13.282,8.695)
C5': (-5.230,14.381,7.282)
O6: (-2.503,8.079,11.617)
O4': (-3.461,13.771,8.800)
C8: (-0.944,11.838,10.361)
C2: (-4.522,9.645,9.206)
C6: (-2.859,8.936,10.820)
C5: (-2.225,10.156,10.499)
C4: (-2.801,10.981,9.571)
P: (-6.838,12.417,6.499)
C4': (-3.771,14.525,7.600)
C2': (-1.714,13.232,7.223)
O2': (-0.469,13.869,7.023)
N1: (-4.029,8.766,10.113)
N2: (-5.665,9.289,8.648)
N3: (-3.936,10.790,8.878)
N7: (-1.054,10.712,10.994)
N9: (-1.974,12.078,9.500)
O5': (-5.415,13.077,6.744)
O3': (-2.705,14.674,5.345)
OP2: (-6.576,10.973,6.669)
C3': (-2.927,13.853,6.514)
C1': (-2.135,13.282,8.695)
C5': (-5.230,14.381,7.282)
O6: (-2.503,8.079,11.617)
O4': (-3.461,13.771,8.800)
C8: (-0.944,11.838,10.361)
C2: (-4.522,9.645,9.206)
C6: (-2.859,8.936,10.820)
C5: (-2.225,10.156,10.499)
C4: (-2.801,10.981,9.571)
P: (-6.838,12.417,6.499)
C4': (-3.771,14.525,7.600)
C2': (-1.714,13.232,7.223)
O2': (-0.469,13.869,7.023)
N1: (-4.029,8.766,10.113)
N2: (-5.665,9.289,8.648)
N3: (-3.936,10.790,8.878)
N7: (-1.054,10.712,10.994)
N9: (-1.974,12.078,9.500)
O5': (-5.415,13.077,6.744)
O3': (-2.705,14.674,5.345)
OP1: (4.036,4.137,21.547)
OP2: (1.992,3.648,20.065)
C3': (4.068,8.007,18.379)
C1': (4.019,7.406,16.097)
C5': (5.054,5.760,19.131)
O6: (-1.532,6.252,14.161)
O4': (4.743,6.413,16.808)
C8: (2.098,5.775,16.369)
C2: (0.926,8.687,13.316)
C6: (-0.454,6.843,14.188)
C5: (0.682,6.560,14.983)
C4: (1.799,7.363,14.865)
P: (3.440,3.974,20.198)
C4': (5.072,6.898,18.130)
C2': (3.940,8.637,17.002)
O2': (5.005,9.513,16.711)
N1: (-0.245,7.945,13.365)
N2: (0.951,9.730,12.461)
N3: (1.990,8.429,14.053)
N7: (0.889,5.559,15.929)
N9: (2.702,6.866,15.780)
O5': (3.718,5.284,19.327)
O3': (4.596,8.930,19.323)
OP2: (1.992,3.648,20.065)
C3': (4.068,8.007,18.379)
C1': (4.019,7.406,16.097)
C5': (5.054,5.760,19.131)
O6: (-1.532,6.252,14.161)
O4': (4.743,6.413,16.808)
C8: (2.098,5.775,16.369)
C2: (0.926,8.687,13.316)
C6: (-0.454,6.843,14.188)
C5: (0.682,6.560,14.983)
C4: (1.799,7.363,14.865)
P: (3.440,3.974,20.198)
C4': (5.072,6.898,18.130)
C2': (3.940,8.637,17.002)
O2': (5.005,9.513,16.711)
N1: (-0.245,7.945,13.365)
N2: (0.951,9.730,12.461)
N3: (1.990,8.429,14.053)
N7: (0.889,5.559,15.929)
N9: (2.702,6.866,15.780)
O5': (3.718,5.284,19.327)
O3': (4.596,8.930,19.323)
Image (generated by PyMOL):