Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DUQ:H7:G5
Extra
PDB:
ATOM 1 O3' G A 6 4.148 23.370 9.054 1.00 47.24 O
ATOM 2 P G A 7 5.066 23.889 10.282 1.00 53.12 P
ATOM 3 OP1 G A 7 4.601 23.283 11.553 1.00 56.26 O
ATOM 4 OP2 G A 7 5.168 25.358 10.177 1.00 44.40 O
ATOM 5 O5' G A 7 6.532 23.346 9.982 1.00 54.18 O
ATOM 6 C5' G A 7 6.777 21.995 9.621 1.00 48.45 C
ATOM 7 C4' G A 7 8.231 21.848 9.293 1.00 51.05 C
ATOM 8 O4' G A 7 8.510 22.565 8.066 1.00 47.58 O
ATOM 9 C3' G A 7 9.112 22.532 10.339 1.00 59.28 C
ATOM 10 O3' G A 7 9.395 21.726 11.509 1.00 70.23 O
ATOM 11 C2' G A 7 10.317 23.103 9.585 1.00 52.34 C
ATOM 12 O2' G A 7 11.530 22.408 9.790 1.00 66.78 O
ATOM 13 C1' G A 7 9.850 23.040 8.124 1.00 55.07 C
ATOM 14 N9 G A 7 10.021 24.231 7.293 1.00 40.10 N
ATOM 15 C8 G A 7 11.081 24.472 6.457 1.00 29.90 C
ATOM 16 N7 G A 7 10.998 25.609 5.836 1.00 38.45 N
ATOM 17 C5 G A 7 9.813 26.163 6.296 1.00 37.83 C
ATOM 18 C6 G A 7 9.195 27.400 5.972 1.00 33.73 C
ATOM 19 O6 G A 7 9.581 28.273 5.184 1.00 52.28 O
ATOM 20 N1 G A 7 8.010 27.572 6.651 1.00 36.78 N
ATOM 21 C2 G A 7 7.473 26.672 7.527 1.00 44.41 C
ATOM 22 N2 G A 7 6.320 27.034 8.067 1.00 42.29 N
ATOM 23 N3 G A 7 8.028 25.508 7.842 1.00 39.45 N
ATOM 24 C4 G A 7 9.193 25.323 7.189 1.00 38.41 C
ATOM 25 P U A 8 9.834 20.159 11.387 1.00 63.63 P
ATOM 26 OP1 U A 8 10.647 19.850 10.169 1.00 61.99 O
ATOM 27 OP2 U A 8 8.588 19.382 11.648 1.00 65.08 O
ATOM 28 O5' U A 8 10.791 19.951 12.641 1.00 52.65 O
TER
ATOM 1 O3' G B 4 16.186 33.555 -2.641 1.00 29.38 O
ATOM 2 P G B 5 15.340 32.376 -3.348 1.00 41.88 P
ATOM 3 OP1 G B 5 15.884 32.160 -4.711 1.00 47.72 O
ATOM 4 OP2 G B 5 13.894 32.727 -3.164 1.00 33.09 O
ATOM 5 O5' G B 5 15.619 31.083 -2.459 1.00 27.00 O
ATOM 6 C5' G B 5 16.960 30.635 -2.251 1.00 32.07 C
ATOM 7 C4' G B 5 16.979 29.493 -1.274 1.00 38.75 C
ATOM 8 O4' G B 5 16.609 29.959 0.048 1.00 40.25 O
ATOM 9 C3' G B 5 15.995 28.374 -1.571 1.00 40.04 C
ATOM 10 O3' G B 5 16.579 27.466 -2.501 1.00 51.35 O
ATOM 11 C2' G B 5 15.869 27.717 -0.213 1.00 33.79 C
ATOM 12 O2' G B 5 16.986 26.902 0.005 1.00 36.00 O
ATOM 13 C1' G B 5 15.903 28.930 0.724 1.00 30.76 C
ATOM 14 N9 G B 5 14.569 29.431 1.031 1.00 26.50 N
ATOM 15 C8 G B 5 13.935 30.508 0.451 1.00 29.60 C
ATOM 16 N7 G B 5 12.725 30.699 0.909 1.00 30.68 N
ATOM 17 C5 G B 5 12.550 29.685 1.852 1.00 32.18 C
ATOM 18 C6 G B 5 11.438 29.385 2.689 1.00 27.45 C
ATOM 19 O6 G B 5 10.352 29.979 2.768 1.00 37.73 O
ATOM 20 N1 G B 5 11.691 28.280 3.499 1.00 37.94 N
ATOM 21 C2 G B 5 12.876 27.558 3.513 1.00 42.13 C
ATOM 22 N2 G B 5 12.942 26.505 4.352 1.00 40.99 N
ATOM 23 N3 G B 5 13.916 27.843 2.754 1.00 37.13 N
ATOM 24 C4 G B 5 13.685 28.905 1.949 1.00 31.06 C
ATOM 25 P C B 6 15.654 26.641 -3.528 1.00 44.97 P
ATOM 26 OP1 C B 6 16.650 26.087 -4.473 1.00 52.61 O
ATOM 27 OP2 C B 6 14.490 27.405 -4.044 1.00 37.83 O
ATOM 28 O5' C B 6 15.073 25.459 -2.649 1.00 41.78 O
TER
ATOM 2 P G A 7 5.066 23.889 10.282 1.00 53.12 P
ATOM 3 OP1 G A 7 4.601 23.283 11.553 1.00 56.26 O
ATOM 4 OP2 G A 7 5.168 25.358 10.177 1.00 44.40 O
ATOM 5 O5' G A 7 6.532 23.346 9.982 1.00 54.18 O
ATOM 6 C5' G A 7 6.777 21.995 9.621 1.00 48.45 C
ATOM 7 C4' G A 7 8.231 21.848 9.293 1.00 51.05 C
ATOM 8 O4' G A 7 8.510 22.565 8.066 1.00 47.58 O
ATOM 9 C3' G A 7 9.112 22.532 10.339 1.00 59.28 C
ATOM 10 O3' G A 7 9.395 21.726 11.509 1.00 70.23 O
ATOM 11 C2' G A 7 10.317 23.103 9.585 1.00 52.34 C
ATOM 12 O2' G A 7 11.530 22.408 9.790 1.00 66.78 O
ATOM 13 C1' G A 7 9.850 23.040 8.124 1.00 55.07 C
ATOM 14 N9 G A 7 10.021 24.231 7.293 1.00 40.10 N
ATOM 15 C8 G A 7 11.081 24.472 6.457 1.00 29.90 C
ATOM 16 N7 G A 7 10.998 25.609 5.836 1.00 38.45 N
ATOM 17 C5 G A 7 9.813 26.163 6.296 1.00 37.83 C
ATOM 18 C6 G A 7 9.195 27.400 5.972 1.00 33.73 C
ATOM 19 O6 G A 7 9.581 28.273 5.184 1.00 52.28 O
ATOM 20 N1 G A 7 8.010 27.572 6.651 1.00 36.78 N
ATOM 21 C2 G A 7 7.473 26.672 7.527 1.00 44.41 C
ATOM 22 N2 G A 7 6.320 27.034 8.067 1.00 42.29 N
ATOM 23 N3 G A 7 8.028 25.508 7.842 1.00 39.45 N
ATOM 24 C4 G A 7 9.193 25.323 7.189 1.00 38.41 C
ATOM 25 P U A 8 9.834 20.159 11.387 1.00 63.63 P
ATOM 26 OP1 U A 8 10.647 19.850 10.169 1.00 61.99 O
ATOM 27 OP2 U A 8 8.588 19.382 11.648 1.00 65.08 O
ATOM 28 O5' U A 8 10.791 19.951 12.641 1.00 52.65 O
TER
ATOM 1 O3' G B 4 16.186 33.555 -2.641 1.00 29.38 O
ATOM 2 P G B 5 15.340 32.376 -3.348 1.00 41.88 P
ATOM 3 OP1 G B 5 15.884 32.160 -4.711 1.00 47.72 O
ATOM 4 OP2 G B 5 13.894 32.727 -3.164 1.00 33.09 O
ATOM 5 O5' G B 5 15.619 31.083 -2.459 1.00 27.00 O
ATOM 6 C5' G B 5 16.960 30.635 -2.251 1.00 32.07 C
ATOM 7 C4' G B 5 16.979 29.493 -1.274 1.00 38.75 C
ATOM 8 O4' G B 5 16.609 29.959 0.048 1.00 40.25 O
ATOM 9 C3' G B 5 15.995 28.374 -1.571 1.00 40.04 C
ATOM 10 O3' G B 5 16.579 27.466 -2.501 1.00 51.35 O
ATOM 11 C2' G B 5 15.869 27.717 -0.213 1.00 33.79 C
ATOM 12 O2' G B 5 16.986 26.902 0.005 1.00 36.00 O
ATOM 13 C1' G B 5 15.903 28.930 0.724 1.00 30.76 C
ATOM 14 N9 G B 5 14.569 29.431 1.031 1.00 26.50 N
ATOM 15 C8 G B 5 13.935 30.508 0.451 1.00 29.60 C
ATOM 16 N7 G B 5 12.725 30.699 0.909 1.00 30.68 N
ATOM 17 C5 G B 5 12.550 29.685 1.852 1.00 32.18 C
ATOM 18 C6 G B 5 11.438 29.385 2.689 1.00 27.45 C
ATOM 19 O6 G B 5 10.352 29.979 2.768 1.00 37.73 O
ATOM 20 N1 G B 5 11.691 28.280 3.499 1.00 37.94 N
ATOM 21 C2 G B 5 12.876 27.558 3.513 1.00 42.13 C
ATOM 22 N2 G B 5 12.942 26.505 4.352 1.00 40.99 N
ATOM 23 N3 G B 5 13.916 27.843 2.754 1.00 37.13 N
ATOM 24 C4 G B 5 13.685 28.905 1.949 1.00 31.06 C
ATOM 25 P C B 6 15.654 26.641 -3.528 1.00 44.97 P
ATOM 26 OP1 C B 6 16.650 26.087 -4.473 1.00 52.61 O
ATOM 27 OP2 C B 6 14.490 27.405 -4.044 1.00 37.83 O
ATOM 28 O5' C B 6 15.073 25.459 -2.649 1.00 41.78 O
TER
Atoms:
OP1: (4.601,23.283,11.553)
OP2: (5.168,25.358,10.177)
C3': (9.112,22.532,10.339)
C1': (9.850,23.040,8.124)
C5': (6.777,21.995,9.621)
O6: (9.581,28.273,5.184)
O4': (8.510,22.565,8.066)
C8: (11.081,24.472,6.457)
C2: (7.473,26.672,7.527)
C6: (9.195,27.400,5.972)
C5: (9.813,26.163,6.296)
C4: (9.193,25.323,7.189)
P: (5.066,23.889,10.282)
C4': (8.231,21.848,9.293)
C2': (10.317,23.103,9.585)
O2': (11.530,22.408,9.790)
N1: (8.010,27.572,6.651)
N2: (6.320,27.034,8.067)
N3: (8.028,25.508,7.842)
N7: (10.998,25.609,5.836)
N9: (10.021,24.231,7.293)
O5': (6.532,23.346,9.982)
O3': (9.395,21.726,11.509)
OP2: (5.168,25.358,10.177)
C3': (9.112,22.532,10.339)
C1': (9.850,23.040,8.124)
C5': (6.777,21.995,9.621)
O6: (9.581,28.273,5.184)
O4': (8.510,22.565,8.066)
C8: (11.081,24.472,6.457)
C2: (7.473,26.672,7.527)
C6: (9.195,27.400,5.972)
C5: (9.813,26.163,6.296)
C4: (9.193,25.323,7.189)
P: (5.066,23.889,10.282)
C4': (8.231,21.848,9.293)
C2': (10.317,23.103,9.585)
O2': (11.530,22.408,9.790)
N1: (8.010,27.572,6.651)
N2: (6.320,27.034,8.067)
N3: (8.028,25.508,7.842)
N7: (10.998,25.609,5.836)
N9: (10.021,24.231,7.293)
O5': (6.532,23.346,9.982)
O3': (9.395,21.726,11.509)
OP1: (15.884,32.160,-4.711)
OP2: (13.894,32.727,-3.164)
C3': (15.995,28.374,-1.571)
C1': (15.903,28.930,0.724)
C5': (16.960,30.635,-2.251)
O6: (10.352,29.979,2.768)
O4': (16.609,29.959,0.048)
C8: (13.935,30.508,0.451)
C2: (12.876,27.558,3.513)
C6: (11.438,29.385,2.689)
C5: (12.550,29.685,1.852)
C4: (13.685,28.905,1.949)
P: (15.340,32.376,-3.348)
C4': (16.979,29.493,-1.274)
C2': (15.869,27.717,-0.213)
O2': (16.986,26.902,0.005)
N1: (11.691,28.280,3.499)
N2: (12.942,26.505,4.352)
N3: (13.916,27.843,2.754)
N7: (12.725,30.699,0.909)
N9: (14.569,29.431,1.031)
O5': (15.619,31.083,-2.459)
O3': (16.579,27.466,-2.501)
OP2: (13.894,32.727,-3.164)
C3': (15.995,28.374,-1.571)
C1': (15.903,28.930,0.724)
C5': (16.960,30.635,-2.251)
O6: (10.352,29.979,2.768)
O4': (16.609,29.959,0.048)
C8: (13.935,30.508,0.451)
C2: (12.876,27.558,3.513)
C6: (11.438,29.385,2.689)
C5: (12.550,29.685,1.852)
C4: (13.685,28.905,1.949)
P: (15.340,32.376,-3.348)
C4': (16.979,29.493,-1.274)
C2': (15.869,27.717,-0.213)
O2': (16.986,26.902,0.005)
N1: (11.691,28.280,3.499)
N2: (12.942,26.505,4.352)
N3: (13.916,27.843,2.754)
N7: (12.725,30.699,0.909)
N9: (14.569,29.431,1.031)
O5': (15.619,31.083,-2.459)
O3': (16.579,27.466,-2.501)
Image (generated by PyMOL):