Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NTB:A12:A5
Extra
PDB:
ATOM 1 O3' G A 11 6.011 34.943 -11.878 1.00 43.46 O
ATOM 2 P G A 12 5.533 34.425 -13.307 1.00 43.01 P
ATOM 3 OP1 G A 12 6.390 35.141 -14.270 1.00 43.74 O
ATOM 4 OP2 G A 12 4.057 34.550 -13.387 1.00 43.42 O
ATOM 5 O5' G A 12 5.936 32.878 -13.329 1.00 42.50 O
ATOM 6 C5' G A 12 7.291 32.514 -13.500 1.00 42.59 C
ATOM 7 C4' G A 12 7.421 31.035 -13.783 1.00 43.47 C
ATOM 8 O4' G A 12 8.824 30.689 -13.851 1.00 43.58 O
ATOM 9 C3' G A 12 6.866 30.115 -12.710 1.00 44.25 C
ATOM 10 O3' G A 12 5.467 29.931 -12.832 1.00 44.64 O
ATOM 11 C2' G A 12 7.657 28.844 -12.962 1.00 44.43 C
ATOM 12 O2' G A 12 7.214 28.087 -14.064 1.00 44.28 O
ATOM 13 C1' G A 12 9.032 29.436 -13.225 1.00 44.44 C
ATOM 14 N9 G A 12 9.805 29.617 -12.000 1.00 45.24 N
ATOM 15 C8 G A 12 10.476 30.737 -11.571 1.00 45.38 C
ATOM 16 N7 G A 12 11.084 30.565 -10.429 1.00 45.55 N
ATOM 17 C5 G A 12 10.799 29.253 -10.087 1.00 45.46 C
ATOM 18 C6 G A 12 11.177 28.497 -8.959 1.00 46.12 C
ATOM 19 O6 G A 12 11.870 28.845 -8.000 1.00 45.93 O
ATOM 20 N1 G A 12 10.664 27.203 -8.999 1.00 47.01 N
ATOM 21 C2 G A 12 9.876 26.695 -10.007 1.00 46.58 C
ATOM 22 N2 G A 12 9.466 25.419 -9.874 1.00 45.72 N
ATOM 23 N3 G A 12 9.518 27.399 -11.072 1.00 46.11 N
ATOM 24 C4 G A 12 10.013 28.661 -11.042 1.00 45.41 C
ATOM 25 P A A 13 4.524 30.317 -11.601 1.00 46.50 P
ATOM 26 OP1 A A 13 3.259 30.842 -12.156 1.00 46.59 O
ATOM 27 OP2 A A 13 5.302 31.180 -10.695 1.00 46.46 O
ATOM 28 O5' A A 13 4.250 28.920 -10.828 1.00 46.69 O
TER
ATOM 1 O3' C B 4 21.653 37.522 -5.739 1.00 49.46 O
ATOM 2 P G B 5 20.528 38.189 -4.822 1.00 49.77 P
ATOM 3 OP1 G B 5 20.790 39.642 -4.884 1.00 50.65 O
ATOM 4 OP2 G B 5 20.378 37.521 -3.510 1.00 48.95 O
ATOM 5 O5' G B 5 19.231 37.892 -5.694 1.00 50.20 O
ATOM 6 C5' G B 5 18.551 36.668 -5.621 1.00 49.36 C
ATOM 7 C4' G B 5 17.378 36.704 -6.573 1.00 48.82 C
ATOM 8 O4' G B 5 16.802 35.381 -6.639 1.00 48.01 O
ATOM 9 C3' G B 5 16.240 37.642 -6.147 1.00 48.96 C
ATOM 10 O3' G B 5 15.580 38.287 -7.244 1.00 51.36 O
ATOM 11 C2' G B 5 15.265 36.692 -5.467 1.00 48.14 C
ATOM 12 O2' G B 5 13.924 37.152 -5.499 1.00 47.39 O
ATOM 13 C1' G B 5 15.431 35.470 -6.351 1.00 47.10 C
ATOM 14 N9 G B 5 14.990 34.213 -5.778 1.00 45.18 N
ATOM 15 C8 G B 5 15.072 33.771 -4.484 1.00 45.13 C
ATOM 16 N7 G B 5 14.564 32.576 -4.312 1.00 44.29 N
ATOM 17 C5 G B 5 14.123 32.226 -5.575 1.00 43.51 C
ATOM 18 C6 G B 5 13.485 31.058 -6.033 1.00 43.55 C
ATOM 19 O6 G B 5 13.173 30.054 -5.390 1.00 44.37 O
ATOM 20 N1 G B 5 13.210 31.119 -7.392 1.00 43.71 N
ATOM 21 C2 G B 5 13.513 32.175 -8.209 1.00 44.76 C
ATOM 22 N2 G B 5 13.171 32.064 -9.497 1.00 45.97 N
ATOM 23 N3 G B 5 14.110 33.275 -7.793 1.00 45.18 N
ATOM 24 C4 G B 5 14.388 33.222 -6.475 1.00 44.37 C
ATOM 25 P C B 6 16.200 38.836 -8.618 1.00 52.99 P
ATOM 26 OP1 C B 6 17.500 39.465 -8.278 1.00 52.99 O
ATOM 27 OP2 C B 6 15.135 39.622 -9.297 1.00 51.88 O
ATOM 28 O5' C B 6 16.467 37.516 -9.488 1.00 52.26 O
TER
ATOM 2 P G A 12 5.533 34.425 -13.307 1.00 43.01 P
ATOM 3 OP1 G A 12 6.390 35.141 -14.270 1.00 43.74 O
ATOM 4 OP2 G A 12 4.057 34.550 -13.387 1.00 43.42 O
ATOM 5 O5' G A 12 5.936 32.878 -13.329 1.00 42.50 O
ATOM 6 C5' G A 12 7.291 32.514 -13.500 1.00 42.59 C
ATOM 7 C4' G A 12 7.421 31.035 -13.783 1.00 43.47 C
ATOM 8 O4' G A 12 8.824 30.689 -13.851 1.00 43.58 O
ATOM 9 C3' G A 12 6.866 30.115 -12.710 1.00 44.25 C
ATOM 10 O3' G A 12 5.467 29.931 -12.832 1.00 44.64 O
ATOM 11 C2' G A 12 7.657 28.844 -12.962 1.00 44.43 C
ATOM 12 O2' G A 12 7.214 28.087 -14.064 1.00 44.28 O
ATOM 13 C1' G A 12 9.032 29.436 -13.225 1.00 44.44 C
ATOM 14 N9 G A 12 9.805 29.617 -12.000 1.00 45.24 N
ATOM 15 C8 G A 12 10.476 30.737 -11.571 1.00 45.38 C
ATOM 16 N7 G A 12 11.084 30.565 -10.429 1.00 45.55 N
ATOM 17 C5 G A 12 10.799 29.253 -10.087 1.00 45.46 C
ATOM 18 C6 G A 12 11.177 28.497 -8.959 1.00 46.12 C
ATOM 19 O6 G A 12 11.870 28.845 -8.000 1.00 45.93 O
ATOM 20 N1 G A 12 10.664 27.203 -8.999 1.00 47.01 N
ATOM 21 C2 G A 12 9.876 26.695 -10.007 1.00 46.58 C
ATOM 22 N2 G A 12 9.466 25.419 -9.874 1.00 45.72 N
ATOM 23 N3 G A 12 9.518 27.399 -11.072 1.00 46.11 N
ATOM 24 C4 G A 12 10.013 28.661 -11.042 1.00 45.41 C
ATOM 25 P A A 13 4.524 30.317 -11.601 1.00 46.50 P
ATOM 26 OP1 A A 13 3.259 30.842 -12.156 1.00 46.59 O
ATOM 27 OP2 A A 13 5.302 31.180 -10.695 1.00 46.46 O
ATOM 28 O5' A A 13 4.250 28.920 -10.828 1.00 46.69 O
TER
ATOM 1 O3' C B 4 21.653 37.522 -5.739 1.00 49.46 O
ATOM 2 P G B 5 20.528 38.189 -4.822 1.00 49.77 P
ATOM 3 OP1 G B 5 20.790 39.642 -4.884 1.00 50.65 O
ATOM 4 OP2 G B 5 20.378 37.521 -3.510 1.00 48.95 O
ATOM 5 O5' G B 5 19.231 37.892 -5.694 1.00 50.20 O
ATOM 6 C5' G B 5 18.551 36.668 -5.621 1.00 49.36 C
ATOM 7 C4' G B 5 17.378 36.704 -6.573 1.00 48.82 C
ATOM 8 O4' G B 5 16.802 35.381 -6.639 1.00 48.01 O
ATOM 9 C3' G B 5 16.240 37.642 -6.147 1.00 48.96 C
ATOM 10 O3' G B 5 15.580 38.287 -7.244 1.00 51.36 O
ATOM 11 C2' G B 5 15.265 36.692 -5.467 1.00 48.14 C
ATOM 12 O2' G B 5 13.924 37.152 -5.499 1.00 47.39 O
ATOM 13 C1' G B 5 15.431 35.470 -6.351 1.00 47.10 C
ATOM 14 N9 G B 5 14.990 34.213 -5.778 1.00 45.18 N
ATOM 15 C8 G B 5 15.072 33.771 -4.484 1.00 45.13 C
ATOM 16 N7 G B 5 14.564 32.576 -4.312 1.00 44.29 N
ATOM 17 C5 G B 5 14.123 32.226 -5.575 1.00 43.51 C
ATOM 18 C6 G B 5 13.485 31.058 -6.033 1.00 43.55 C
ATOM 19 O6 G B 5 13.173 30.054 -5.390 1.00 44.37 O
ATOM 20 N1 G B 5 13.210 31.119 -7.392 1.00 43.71 N
ATOM 21 C2 G B 5 13.513 32.175 -8.209 1.00 44.76 C
ATOM 22 N2 G B 5 13.171 32.064 -9.497 1.00 45.97 N
ATOM 23 N3 G B 5 14.110 33.275 -7.793 1.00 45.18 N
ATOM 24 C4 G B 5 14.388 33.222 -6.475 1.00 44.37 C
ATOM 25 P C B 6 16.200 38.836 -8.618 1.00 52.99 P
ATOM 26 OP1 C B 6 17.500 39.465 -8.278 1.00 52.99 O
ATOM 27 OP2 C B 6 15.135 39.622 -9.297 1.00 51.88 O
ATOM 28 O5' C B 6 16.467 37.516 -9.488 1.00 52.26 O
TER
Atoms:
OP1: (6.390,35.141,-14.270)
OP2: (4.057,34.550,-13.387)
C3': (6.866,30.115,-12.710)
C1': (9.032,29.436,-13.225)
C5': (7.291,32.514,-13.500)
O6: (11.870,28.845,-8.000)
O4': (8.824,30.689,-13.851)
C8: (10.476,30.737,-11.571)
C2: (9.876,26.695,-10.007)
C6: (11.177,28.497,-8.959)
C5: (10.799,29.253,-10.087)
C4: (10.013,28.661,-11.042)
P: (5.533,34.425,-13.307)
C4': (7.421,31.035,-13.783)
C2': (7.657,28.844,-12.962)
O2': (7.214,28.087,-14.064)
N1: (10.664,27.203,-8.999)
N2: (9.466,25.419,-9.874)
N3: (9.518,27.399,-11.072)
N7: (11.084,30.565,-10.429)
N9: (9.805,29.617,-12.000)
O5': (5.936,32.878,-13.329)
O3': (5.467,29.931,-12.832)
OP2: (4.057,34.550,-13.387)
C3': (6.866,30.115,-12.710)
C1': (9.032,29.436,-13.225)
C5': (7.291,32.514,-13.500)
O6: (11.870,28.845,-8.000)
O4': (8.824,30.689,-13.851)
C8: (10.476,30.737,-11.571)
C2: (9.876,26.695,-10.007)
C6: (11.177,28.497,-8.959)
C5: (10.799,29.253,-10.087)
C4: (10.013,28.661,-11.042)
P: (5.533,34.425,-13.307)
C4': (7.421,31.035,-13.783)
C2': (7.657,28.844,-12.962)
O2': (7.214,28.087,-14.064)
N1: (10.664,27.203,-8.999)
N2: (9.466,25.419,-9.874)
N3: (9.518,27.399,-11.072)
N7: (11.084,30.565,-10.429)
N9: (9.805,29.617,-12.000)
O5': (5.936,32.878,-13.329)
O3': (5.467,29.931,-12.832)
OP1: (20.790,39.642,-4.884)
OP2: (20.378,37.521,-3.510)
C3': (16.240,37.642,-6.147)
C1': (15.431,35.470,-6.351)
C5': (18.551,36.668,-5.621)
O6: (13.173,30.054,-5.390)
O4': (16.802,35.381,-6.639)
C8: (15.072,33.771,-4.484)
C2: (13.513,32.175,-8.209)
C6: (13.485,31.058,-6.033)
C5: (14.123,32.226,-5.575)
C4: (14.388,33.222,-6.475)
P: (20.528,38.189,-4.822)
C4': (17.378,36.704,-6.573)
C2': (15.265,36.692,-5.467)
O2': (13.924,37.152,-5.499)
N1: (13.210,31.119,-7.392)
N2: (13.171,32.064,-9.497)
N3: (14.110,33.275,-7.793)
N7: (14.564,32.576,-4.312)
N9: (14.990,34.213,-5.778)
O5': (19.231,37.892,-5.694)
O3': (15.580,38.287,-7.244)
OP2: (20.378,37.521,-3.510)
C3': (16.240,37.642,-6.147)
C1': (15.431,35.470,-6.351)
C5': (18.551,36.668,-5.621)
O6: (13.173,30.054,-5.390)
O4': (16.802,35.381,-6.639)
C8: (15.072,33.771,-4.484)
C2: (13.513,32.175,-8.209)
C6: (13.485,31.058,-6.033)
C5: (14.123,32.226,-5.575)
C4: (14.388,33.222,-6.475)
P: (20.528,38.189,-4.822)
C4': (17.378,36.704,-6.573)
C2': (15.265,36.692,-5.467)
O2': (13.924,37.152,-5.499)
N1: (13.210,31.119,-7.392)
N2: (13.171,32.064,-9.497)
N3: (14.110,33.275,-7.793)
N7: (14.564,32.576,-4.312)
N9: (14.990,34.213,-5.778)
O5': (19.231,37.892,-5.694)
O3': (15.580,38.287,-7.244)
Image (generated by PyMOL):