ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0690:0731

Extra

PDB:
ATOM 1 O3' U A 689 34.809 55.121 45.445 1.00 61.71 O
ATOM 2 P G A 690 34.204 53.714 44.968 1.00 64.00 P
ATOM 3 OP1 G A 690 35.227 53.120 44.064 1.00 63.35 O
ATOM 4 OP2 G A 690 32.810 53.892 44.484 1.00 61.84 O
ATOM 5 O5' G A 690 34.169 52.881 46.326 1.00 65.17 O
ATOM 6 C5' G A 690 34.543 51.500 46.349 1.00 66.94 C
ATOM 7 C4' G A 690 35.112 51.122 47.697 1.00 67.80 C
ATOM 8 O4' G A 690 36.406 51.752 47.907 1.00 67.43 O
ATOM 9 C3' G A 690 34.326 51.526 48.932 1.00 67.94 C
ATOM 10 O3' G A 690 33.192 50.698 49.154 1.00 67.18 O
ATOM 11 C2' G A 690 35.382 51.368 50.019 1.00 68.28 C
ATOM 12 O2' G A 690 35.609 50.018 50.369 1.00 68.53 O
ATOM 13 C1' G A 690 36.625 51.907 49.304 1.00 69.09 C
ATOM 14 N9 G A 690 36.847 53.320 49.607 1.00 70.48 N
ATOM 15 C8 G A 690 36.640 54.406 48.788 1.00 69.94 C
ATOM 16 N7 G A 690 36.905 55.543 49.372 1.00 70.44 N
ATOM 17 C5 G A 690 37.317 55.188 50.651 1.00 70.55 C
ATOM 18 C6 G A 690 37.724 55.996 51.754 1.00 71.22 C
ATOM 19 O6 G A 690 37.804 57.229 51.823 1.00 71.27 O
ATOM 20 N1 G A 690 38.053 55.221 52.861 1.00 71.22 N
ATOM 21 C2 G A 690 37.997 53.851 52.910 1.00 70.51 C
ATOM 22 N2 G A 690 38.354 53.286 54.068 1.00 70.33 N
ATOM 23 N3 G A 690 37.620 53.092 51.898 1.00 70.49 N
ATOM 24 C4 G A 690 37.296 53.821 50.809 1.00 70.31 C
ATOM 25 P G A 691 32.032 51.188 50.155 1.00 66.82 P
ATOM 26 OP1 G A 691 30.918 50.207 50.049 1.00 67.46 O
ATOM 27 OP2 G A 691 31.759 52.627 49.921 1.00 66.21 O
ATOM 28 O5' G A 691 32.697 51.023 51.592 1.00 66.70 O
TER

ATOM 1 O3' G B 730 42.378 66.757 47.233 1.00 49.03 O
ATOM 2 P G B 731 40.968 66.619 47.999 1.00 50.89 P
ATOM 3 OP1 G B 731 40.144 67.798 47.634 1.00 50.54 O
ATOM 4 OP2 G B 731 41.206 66.312 49.431 1.00 48.38 O
ATOM 5 O5' G B 731 40.295 65.328 47.346 1.00 49.90 O
ATOM 6 C5' G B 731 40.041 65.253 45.929 1.00 48.30 C
ATOM 7 C4' G B 731 38.684 64.631 45.669 1.00 49.18 C
ATOM 8 O4' G B 731 38.628 63.316 46.284 1.00 50.57 O
ATOM 9 C3' G B 731 37.479 65.358 46.248 1.00 48.68 C
ATOM 10 O3' G B 731 37.067 66.418 45.390 1.00 45.66 O
ATOM 11 C2' G B 731 36.438 64.244 46.329 1.00 49.39 C
ATOM 12 O2' G B 731 35.823 63.965 45.082 1.00 48.86 O
ATOM 13 C1' G B 731 37.310 63.050 46.724 1.00 49.26 C
ATOM 14 N9 G B 731 37.357 62.757 48.153 1.00 50.85 N
ATOM 15 C8 G B 731 37.191 63.633 49.200 1.00 50.96 C
ATOM 16 N7 G B 731 37.278 63.057 50.367 1.00 50.99 N
ATOM 17 C5 G B 731 37.516 61.722 50.074 1.00 51.65 C
ATOM 18 C6 G B 731 37.690 60.611 50.936 1.00 50.89 C
ATOM 19 O6 G B 731 37.664 60.586 52.171 1.00 52.05 O
ATOM 20 N1 G B 731 37.910 59.439 50.221 1.00 50.43 N
ATOM 21 C2 G B 731 37.951 59.344 48.852 1.00 51.76 C
ATOM 22 N2 G B 731 38.174 58.123 48.346 1.00 50.78 N
ATOM 23 N3 G B 731 37.785 60.372 48.038 1.00 51.66 N
ATOM 24 C4 G B 731 37.574 61.522 48.713 1.00 51.37 C
ATOM 25 P G B 732 35.931 67.440 45.871 1.00 44.65 P
ATOM 26 OP1 G B 732 36.140 67.697 47.313 1.00 48.20 O
ATOM 27 OP2 G B 732 34.611 66.961 45.408 1.00 49.74 O
ATOM 28 O5' G B 732 36.271 68.766 45.053 1.00 50.03 O
TER

Atoms:
OP1: (35.227,53.120,44.064)
OP2: (32.810,53.892,44.484)
C3': (34.326,51.526,48.932)
C1': (36.625,51.907,49.304)
C5': (34.543,51.500,46.349)
O6: (37.804,57.229,51.823)
O4': (36.406,51.752,47.907)
C8: (36.640,54.406,48.788)
C2: (37.997,53.851,52.910)
C6: (37.724,55.996,51.754)
C5: (37.317,55.188,50.651)
C4: (37.296,53.821,50.809)
P: (34.204,53.714,44.968)
C4': (35.112,51.122,47.697)
C2': (35.382,51.368,50.019)
O2': (35.609,50.018,50.369)
N1: (38.053,55.221,52.861)
N2: (38.354,53.286,54.068)
N3: (37.620,53.092,51.898)
N7: (36.905,55.543,49.372)
N9: (36.847,53.320,49.607)
O5': (34.169,52.881,46.326)
O3': (33.192,50.698,49.154)
OP1: (40.144,67.798,47.634)
OP2: (41.206,66.312,49.431)
C3': (37.479,65.358,46.248)
C1': (37.310,63.050,46.724)
C5': (40.041,65.253,45.929)
O6: (37.664,60.586,52.171)
O4': (38.628,63.316,46.284)
C8: (37.191,63.633,49.200)
C2: (37.951,59.344,48.852)
C6: (37.690,60.611,50.936)
C5: (37.516,61.722,50.074)
C4: (37.574,61.522,48.713)
P: (40.968,66.619,47.999)
C4': (38.684,64.631,45.669)
C2': (36.438,64.244,46.329)
O2': (35.823,63.965,45.082)
N1: (37.910,59.439,50.221)
N2: (38.174,58.123,48.346)
N3: (37.785,60.372,48.038)
N7: (37.278,63.057,50.367)
N9: (37.357,62.757,48.153)
O5': (40.295,65.328,47.346)
O3': (37.067,66.418,45.390)
Image (generated by PyMOL):
PyMOL image
show in jmol