ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3BNL:A13:A12

Extra

PDB:
ATOM 1 O3' G A 12 46.968 15.958 3.878 1.00 56.23 O
ATOM 2 P U A 13 46.523 14.659 4.717 1.00 58.87 P
ATOM 3 OP1 U A 13 45.133 14.882 5.193 1.00 69.22 O
ATOM 4 OP2 U A 13 47.591 14.332 5.701 1.00 43.96 O
ATOM 5 O5' U A 13 46.492 13.512 3.617 1.00 47.21 O
ATOM 6 C5' U A 13 45.738 13.679 2.426 1.00 37.64 C
ATOM 7 C4' U A 13 46.197 12.697 1.388 1.00 35.72 C
ATOM 8 O4' U A 13 47.559 13.019 0.999 1.00 50.56 O
ATOM 9 C3' U A 13 46.317 11.264 1.870 1.00 49.10 C
ATOM 10 O3' U A 13 45.062 10.601 1.933 1.00 50.55 O
ATOM 11 C2' U A 13 47.259 10.675 0.828 1.00 43.91 C
ATOM 12 O2' U A 13 46.625 10.450 -0.408 1.00 38.39 O
ATOM 13 C1' U A 13 48.250 11.824 0.653 1.00 35.88 C
ATOM 14 N1 U A 13 49.427 11.681 1.525 1.00 30.28 N
ATOM 15 C2 U A 13 50.417 10.821 1.104 1.00 38.32 C
ATOM 16 O2 U A 13 50.346 10.210 0.053 1.00 38.30 O
ATOM 17 N3 U A 13 51.491 10.699 1.959 1.00 40.55 N
ATOM 18 C4 U A 13 51.664 11.338 3.168 1.00 40.99 C
ATOM 19 O4 U A 13 52.659 11.083 3.854 1.00 40.36 O
ATOM 20 C5 U A 13 50.598 12.223 3.529 1.00 41.15 C
ATOM 21 C6 U A 13 49.542 12.363 2.714 1.00 31.92 C
ATOM 22 P G A 14 44.858 9.403 2.986 1.00 54.08 P
ATOM 23 OP1 G A 14 43.425 9.018 2.970 1.00 75.35 O
ATOM 24 OP2 G A 14 45.506 9.766 4.272 1.00 57.63 O
ATOM 25 O5' G A 14 45.690 8.210 2.350 1.00 50.39 O
TER

ATOM 1 O3' G B 11 51.197 19.268 6.681 1.00 63.88 O
ATOM 2 P G B 12 50.519 17.845 6.996 1.00 57.70 P
ATOM 3 OP1 G B 12 49.376 18.081 7.912 1.00 73.20 O
ATOM 4 OP2 G B 12 51.591 16.894 7.391 1.00 67.58 O
ATOM 5 O5' G B 12 49.928 17.388 5.592 1.00 55.15 O
ATOM 6 C5' G B 12 48.975 18.194 4.910 1.00 51.16 C
ATOM 7 C4' G B 12 48.695 17.619 3.550 1.00 44.64 C
ATOM 8 O4' G B 12 49.906 17.670 2.750 1.00 49.39 O
ATOM 9 C3' G B 12 48.337 16.147 3.556 1.00 53.90 C
ATOM 10 O3' G B 12 46.968 15.958 3.878 1.00 56.23 O
ATOM 11 C2' G B 12 48.677 15.735 2.131 1.00 57.91 C
ATOM 12 O2' G B 12 47.690 16.119 1.199 1.00 62.12 O
ATOM 13 C1' G B 12 49.953 16.543 1.885 1.00 51.53 C
ATOM 14 N9 G B 12 51.168 15.783 2.172 1.00 39.71 N
ATOM 15 C8 G B 12 51.945 15.854 3.304 1.00 39.04 C
ATOM 16 N7 G B 12 52.966 15.038 3.278 1.00 35.87 N
ATOM 17 C5 G B 12 52.857 14.386 2.055 1.00 28.39 C
ATOM 18 C6 G B 12 53.675 13.378 1.466 1.00 26.44 C
ATOM 19 O6 G B 12 54.688 12.833 1.928 1.00 40.15 O
ATOM 20 N1 G B 12 53.207 13.010 0.213 1.00 31.44 N
ATOM 21 C2 G B 12 52.098 13.533 -0.402 1.00 28.31 C
ATOM 22 N2 G B 12 51.821 13.048 -1.619 1.00 35.26 N
ATOM 23 N3 G B 12 51.322 14.461 0.133 1.00 30.64 N
ATOM 24 C4 G B 12 51.758 14.840 1.355 1.00 38.55 C
ATOM 25 P U B 13 46.523 14.659 4.717 1.00 58.87 P
ATOM 26 OP1 U B 13 45.133 14.882 5.193 1.00 69.22 O
ATOM 27 OP2 U B 13 47.591 14.332 5.701 1.00 43.96 O
ATOM 28 O5' U B 13 46.492 13.512 3.617 1.00 47.21 O
TER

Atoms:
C4: (51.664,11.338,3.168)
N3: (51.491,10.699,1.959)
OP1: (45.133,14.882,5.193)
OP2: (47.591,14.332,5.701)
C2: (50.417,10.821,1.104)
C1': (48.250,11.824,0.653)
C3': (46.317,11.264,1.870)
O5': (46.492,13.512,3.617)
O4': (47.559,13.019,0.999)
C5': (45.738,13.679,2.426)
P: (46.523,14.659,4.717)
C4': (46.197,12.697,1.388)
C2': (47.259,10.675,0.828)
O2': (46.625,10.450,-0.408)
N1: (49.427,11.681,1.525)
O4: (52.659,11.083,3.854)
O2: (50.346,10.210,0.053)
C6: (49.542,12.363,2.714)
C5: (50.598,12.223,3.529)
O3': (45.062,10.601,1.933)
OP1: (49.376,18.081,7.912)
OP2: (51.591,16.894,7.391)
C3': (48.337,16.147,3.556)
C1': (49.953,16.543,1.885)
C5': (48.975,18.194,4.910)
O6: (54.688,12.833,1.928)
O4': (49.906,17.670,2.750)
C8: (51.945,15.854,3.304)
C2: (52.098,13.533,-0.402)
C6: (53.675,13.378,1.466)
C5: (52.857,14.386,2.055)
C4: (51.758,14.840,1.355)
P: (50.519,17.845,6.996)
C4': (48.695,17.619,3.550)
C2': (48.677,15.735,2.131)
O2': (47.690,16.119,1.199)
N1: (53.207,13.010,0.213)
N2: (51.821,13.048,-1.619)
N3: (51.322,14.461,0.133)
N7: (52.966,15.038,3.278)
N9: (51.168,15.783,2.172)
O5': (49.928,17.388,5.592)
O3': (46.968,15.958,3.878)
Image (generated by PyMOL):
PyMOL image
show in jmol