Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0690:0731
Extra
PDB:
ATOM 1 O3' U A 689 34.690 56.267 45.586 1.00 66.63 O
ATOM 2 P G A 690 34.142 54.841 45.107 1.00 67.87 P
ATOM 3 OP1 G A 690 35.069 54.365 44.043 1.00 66.09 O
ATOM 4 OP2 G A 690 32.682 54.947 44.825 1.00 65.52 O
ATOM 5 O5' G A 690 34.345 53.959 46.418 1.00 67.68 O
ATOM 6 C5' G A 690 34.704 52.576 46.339 1.00 67.07 C
ATOM 7 C4' G A 690 35.230 52.096 47.670 1.00 66.64 C
ATOM 8 O4' G A 690 36.538 52.668 47.932 1.00 66.93 O
ATOM 9 C3' G A 690 34.428 52.483 48.900 1.00 65.80 C
ATOM 10 O3' G A 690 33.263 51.685 49.063 1.00 65.16 O
ATOM 11 C2' G A 690 35.451 52.268 50.007 1.00 67.22 C
ATOM 12 O2' G A 690 35.635 50.911 50.351 1.00 67.86 O
ATOM 13 C1' G A 690 36.724 52.790 49.335 1.00 68.27 C
ATOM 14 N9 G A 690 36.952 54.193 49.670 1.00 69.87 N
ATOM 15 C8 G A 690 36.760 55.297 48.874 1.00 69.36 C
ATOM 16 N7 G A 690 37.006 56.421 49.491 1.00 70.09 N
ATOM 17 C5 G A 690 37.398 56.035 50.766 1.00 70.76 C
ATOM 18 C6 G A 690 37.785 56.816 51.893 1.00 71.52 C
ATOM 19 O6 G A 690 37.862 58.049 51.992 1.00 72.02 O
ATOM 20 N1 G A 690 38.099 56.012 52.985 1.00 70.81 N
ATOM 21 C2 G A 690 38.044 54.641 53.000 1.00 70.23 C
ATOM 22 N2 G A 690 38.372 54.045 54.150 1.00 71.20 N
ATOM 23 N3 G A 690 37.689 53.906 51.963 1.00 70.19 N
ATOM 24 C4 G A 690 37.381 54.663 50.888 1.00 70.31 C
ATOM 25 P G A 691 32.076 52.194 50.021 1.00 64.67 P
ATOM 26 OP1 G A 691 30.953 51.241 49.877 1.00 65.65 O
ATOM 27 OP2 G A 691 31.842 53.639 49.784 1.00 65.22 O
ATOM 28 O5' G A 691 32.678 52.005 51.481 1.00 63.86 O
TER
ATOM 1 O3' G B 730 42.567 67.894 47.555 1.00 45.54 O
ATOM 2 P G B 731 41.144 67.628 48.250 1.00 45.43 P
ATOM 3 OP1 G B 731 40.250 68.758 47.900 1.00 45.99 O
ATOM 4 OP2 G B 731 41.339 67.268 49.673 1.00 44.16 O
ATOM 5 O5' G B 731 40.603 66.331 47.501 1.00 50.38 O
ATOM 6 C5' G B 731 40.339 66.330 46.080 1.00 48.38 C
ATOM 7 C4' G B 731 38.994 65.695 45.802 1.00 48.39 C
ATOM 8 O4' G B 731 38.968 64.347 46.343 1.00 49.07 O
ATOM 9 C3' G B 731 37.808 66.382 46.455 1.00 47.91 C
ATOM 10 O3' G B 731 37.370 67.461 45.644 1.00 45.05 O
ATOM 11 C2' G B 731 36.778 65.262 46.547 1.00 49.40 C
ATOM 12 O2' G B 731 36.082 65.040 45.335 1.00 50.66 O
ATOM 13 C1' G B 731 37.672 64.053 46.839 1.00 50.53 C
ATOM 14 N9 G B 731 37.794 63.699 48.251 1.00 52.02 N
ATOM 15 C8 G B 731 37.803 64.551 49.330 1.00 52.66 C
ATOM 16 N7 G B 731 37.955 63.933 50.469 1.00 52.83 N
ATOM 17 C5 G B 731 38.047 62.593 50.124 1.00 52.37 C
ATOM 18 C6 G B 731 38.230 61.447 50.938 1.00 51.80 C
ATOM 19 O6 G B 731 38.349 61.388 52.164 1.00 50.92 O
ATOM 20 N1 G B 731 38.271 60.283 50.179 1.00 51.85 N
ATOM 21 C2 G B 731 38.148 60.225 48.812 1.00 52.67 C
ATOM 22 N2 G B 731 38.207 59.004 48.265 1.00 52.10 N
ATOM 23 N3 G B 731 37.978 61.287 48.040 1.00 52.31 N
ATOM 24 C4 G B 731 37.939 62.430 48.759 1.00 52.65 C
ATOM 25 P G B 732 36.173 68.402 46.143 1.00 45.63 P
ATOM 26 OP1 G B 732 36.386 68.690 47.590 1.00 46.14 O
ATOM 27 OP2 G B 732 34.899 67.794 45.702 1.00 47.35 O
ATOM 28 O5' G B 732 36.393 69.741 45.311 1.00 47.53 O
TER
ATOM 2 P G A 690 34.142 54.841 45.107 1.00 67.87 P
ATOM 3 OP1 G A 690 35.069 54.365 44.043 1.00 66.09 O
ATOM 4 OP2 G A 690 32.682 54.947 44.825 1.00 65.52 O
ATOM 5 O5' G A 690 34.345 53.959 46.418 1.00 67.68 O
ATOM 6 C5' G A 690 34.704 52.576 46.339 1.00 67.07 C
ATOM 7 C4' G A 690 35.230 52.096 47.670 1.00 66.64 C
ATOM 8 O4' G A 690 36.538 52.668 47.932 1.00 66.93 O
ATOM 9 C3' G A 690 34.428 52.483 48.900 1.00 65.80 C
ATOM 10 O3' G A 690 33.263 51.685 49.063 1.00 65.16 O
ATOM 11 C2' G A 690 35.451 52.268 50.007 1.00 67.22 C
ATOM 12 O2' G A 690 35.635 50.911 50.351 1.00 67.86 O
ATOM 13 C1' G A 690 36.724 52.790 49.335 1.00 68.27 C
ATOM 14 N9 G A 690 36.952 54.193 49.670 1.00 69.87 N
ATOM 15 C8 G A 690 36.760 55.297 48.874 1.00 69.36 C
ATOM 16 N7 G A 690 37.006 56.421 49.491 1.00 70.09 N
ATOM 17 C5 G A 690 37.398 56.035 50.766 1.00 70.76 C
ATOM 18 C6 G A 690 37.785 56.816 51.893 1.00 71.52 C
ATOM 19 O6 G A 690 37.862 58.049 51.992 1.00 72.02 O
ATOM 20 N1 G A 690 38.099 56.012 52.985 1.00 70.81 N
ATOM 21 C2 G A 690 38.044 54.641 53.000 1.00 70.23 C
ATOM 22 N2 G A 690 38.372 54.045 54.150 1.00 71.20 N
ATOM 23 N3 G A 690 37.689 53.906 51.963 1.00 70.19 N
ATOM 24 C4 G A 690 37.381 54.663 50.888 1.00 70.31 C
ATOM 25 P G A 691 32.076 52.194 50.021 1.00 64.67 P
ATOM 26 OP1 G A 691 30.953 51.241 49.877 1.00 65.65 O
ATOM 27 OP2 G A 691 31.842 53.639 49.784 1.00 65.22 O
ATOM 28 O5' G A 691 32.678 52.005 51.481 1.00 63.86 O
TER
ATOM 1 O3' G B 730 42.567 67.894 47.555 1.00 45.54 O
ATOM 2 P G B 731 41.144 67.628 48.250 1.00 45.43 P
ATOM 3 OP1 G B 731 40.250 68.758 47.900 1.00 45.99 O
ATOM 4 OP2 G B 731 41.339 67.268 49.673 1.00 44.16 O
ATOM 5 O5' G B 731 40.603 66.331 47.501 1.00 50.38 O
ATOM 6 C5' G B 731 40.339 66.330 46.080 1.00 48.38 C
ATOM 7 C4' G B 731 38.994 65.695 45.802 1.00 48.39 C
ATOM 8 O4' G B 731 38.968 64.347 46.343 1.00 49.07 O
ATOM 9 C3' G B 731 37.808 66.382 46.455 1.00 47.91 C
ATOM 10 O3' G B 731 37.370 67.461 45.644 1.00 45.05 O
ATOM 11 C2' G B 731 36.778 65.262 46.547 1.00 49.40 C
ATOM 12 O2' G B 731 36.082 65.040 45.335 1.00 50.66 O
ATOM 13 C1' G B 731 37.672 64.053 46.839 1.00 50.53 C
ATOM 14 N9 G B 731 37.794 63.699 48.251 1.00 52.02 N
ATOM 15 C8 G B 731 37.803 64.551 49.330 1.00 52.66 C
ATOM 16 N7 G B 731 37.955 63.933 50.469 1.00 52.83 N
ATOM 17 C5 G B 731 38.047 62.593 50.124 1.00 52.37 C
ATOM 18 C6 G B 731 38.230 61.447 50.938 1.00 51.80 C
ATOM 19 O6 G B 731 38.349 61.388 52.164 1.00 50.92 O
ATOM 20 N1 G B 731 38.271 60.283 50.179 1.00 51.85 N
ATOM 21 C2 G B 731 38.148 60.225 48.812 1.00 52.67 C
ATOM 22 N2 G B 731 38.207 59.004 48.265 1.00 52.10 N
ATOM 23 N3 G B 731 37.978 61.287 48.040 1.00 52.31 N
ATOM 24 C4 G B 731 37.939 62.430 48.759 1.00 52.65 C
ATOM 25 P G B 732 36.173 68.402 46.143 1.00 45.63 P
ATOM 26 OP1 G B 732 36.386 68.690 47.590 1.00 46.14 O
ATOM 27 OP2 G B 732 34.899 67.794 45.702 1.00 47.35 O
ATOM 28 O5' G B 732 36.393 69.741 45.311 1.00 47.53 O
TER
Atoms:
OP1: (35.069,54.365,44.043)
OP2: (32.682,54.947,44.825)
C3': (34.428,52.483,48.900)
C1': (36.724,52.790,49.335)
C5': (34.704,52.576,46.339)
O6: (37.862,58.049,51.992)
O4': (36.538,52.668,47.932)
C8: (36.760,55.297,48.874)
C2: (38.044,54.641,53.000)
C6: (37.785,56.816,51.893)
C5: (37.398,56.035,50.766)
C4: (37.381,54.663,50.888)
P: (34.142,54.841,45.107)
C4': (35.230,52.096,47.670)
C2': (35.451,52.268,50.007)
O2': (35.635,50.911,50.351)
N1: (38.099,56.012,52.985)
N2: (38.372,54.045,54.150)
N3: (37.689,53.906,51.963)
N7: (37.006,56.421,49.491)
N9: (36.952,54.193,49.670)
O5': (34.345,53.959,46.418)
O3': (33.263,51.685,49.063)
OP2: (32.682,54.947,44.825)
C3': (34.428,52.483,48.900)
C1': (36.724,52.790,49.335)
C5': (34.704,52.576,46.339)
O6: (37.862,58.049,51.992)
O4': (36.538,52.668,47.932)
C8: (36.760,55.297,48.874)
C2: (38.044,54.641,53.000)
C6: (37.785,56.816,51.893)
C5: (37.398,56.035,50.766)
C4: (37.381,54.663,50.888)
P: (34.142,54.841,45.107)
C4': (35.230,52.096,47.670)
C2': (35.451,52.268,50.007)
O2': (35.635,50.911,50.351)
N1: (38.099,56.012,52.985)
N2: (38.372,54.045,54.150)
N3: (37.689,53.906,51.963)
N7: (37.006,56.421,49.491)
N9: (36.952,54.193,49.670)
O5': (34.345,53.959,46.418)
O3': (33.263,51.685,49.063)
OP1: (40.250,68.758,47.900)
OP2: (41.339,67.268,49.673)
C3': (37.808,66.382,46.455)
C1': (37.672,64.053,46.839)
C5': (40.339,66.330,46.080)
O6: (38.349,61.388,52.164)
O4': (38.968,64.347,46.343)
C8: (37.803,64.551,49.330)
C2: (38.148,60.225,48.812)
C6: (38.230,61.447,50.938)
C5: (38.047,62.593,50.124)
C4: (37.939,62.430,48.759)
P: (41.144,67.628,48.250)
C4': (38.994,65.695,45.802)
C2': (36.778,65.262,46.547)
O2': (36.082,65.040,45.335)
N1: (38.271,60.283,50.179)
N2: (38.207,59.004,48.265)
N3: (37.978,61.287,48.040)
N7: (37.955,63.933,50.469)
N9: (37.794,63.699,48.251)
O5': (40.603,66.331,47.501)
O3': (37.370,67.461,45.644)
OP2: (41.339,67.268,49.673)
C3': (37.808,66.382,46.455)
C1': (37.672,64.053,46.839)
C5': (40.339,66.330,46.080)
O6: (38.349,61.388,52.164)
O4': (38.968,64.347,46.343)
C8: (37.803,64.551,49.330)
C2: (38.148,60.225,48.812)
C6: (38.230,61.447,50.938)
C5: (38.047,62.593,50.124)
C4: (37.939,62.430,48.759)
P: (41.144,67.628,48.250)
C4': (38.994,65.695,45.802)
C2': (36.778,65.262,46.547)
O2': (36.082,65.040,45.335)
N1: (38.271,60.283,50.179)
N2: (38.207,59.004,48.265)
N3: (37.978,61.287,48.040)
N7: (37.955,63.933,50.469)
N9: (37.794,63.699,48.251)
O5': (40.603,66.331,47.501)
O3': (37.370,67.461,45.644)
Image (generated by PyMOL):