Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0690:0731
Extra
PDB:
ATOM 1 O3' U A 689 34.632 56.314 45.666 1.00 70.42 O
ATOM 2 P G A 690 34.193 54.884 45.086 1.00 70.45 P
ATOM 3 OP1 G A 690 35.248 54.461 44.123 1.00 68.39 O
ATOM 4 OP2 G A 690 32.777 54.967 44.635 1.00 69.35 O
ATOM 5 O5' G A 690 34.273 53.965 46.388 1.00 71.00 O
ATOM 6 C5' G A 690 34.651 52.582 46.304 1.00 72.17 C
ATOM 7 C4' G A 690 35.240 52.107 47.618 1.00 72.40 C
ATOM 8 O4' G A 690 36.550 52.700 47.838 1.00 72.76 O
ATOM 9 C3' G A 690 34.486 52.458 48.888 1.00 71.43 C
ATOM 10 O3' G A 690 33.337 51.654 49.094 1.00 69.72 O
ATOM 11 C2' G A 690 35.557 52.236 49.948 1.00 72.25 C
ATOM 12 O2' G A 690 35.773 50.877 50.272 1.00 72.03 O
ATOM 13 C1' G A 690 36.793 52.792 49.237 1.00 73.14 C
ATOM 14 N9 G A 690 37.003 54.191 49.596 1.00 74.45 N
ATOM 15 C8 G A 690 36.843 55.303 48.803 1.00 74.61 C
ATOM 16 N7 G A 690 37.056 56.421 49.442 1.00 74.93 N
ATOM 17 C5 G A 690 37.387 56.023 50.730 1.00 75.58 C
ATOM 18 C6 G A 690 37.708 56.792 51.880 1.00 76.52 C
ATOM 19 O6 G A 690 37.760 58.026 51.996 1.00 77.11 O
ATOM 20 N1 G A 690 37.980 55.978 52.978 1.00 76.10 N
ATOM 21 C2 G A 690 37.940 54.607 52.976 1.00 74.74 C
ATOM 22 N2 G A 690 38.219 54.001 54.135 1.00 73.91 N
ATOM 23 N3 G A 690 37.641 53.883 51.915 1.00 74.91 N
ATOM 24 C4 G A 690 37.375 54.650 50.836 1.00 75.16 C
ATOM 25 P G A 691 32.125 52.223 49.985 1.00 70.00 P
ATOM 26 OP1 G A 691 30.966 51.334 49.769 1.00 71.30 O
ATOM 27 OP2 G A 691 31.980 53.683 49.755 1.00 69.83 O
ATOM 28 O5' G A 691 32.622 51.992 51.477 1.00 69.18 O
TER
ATOM 1 O3' G B 730 42.585 67.860 47.535 1.00 51.88 O
ATOM 2 P G B 731 41.161 67.686 48.252 1.00 52.98 P
ATOM 3 OP1 G B 731 40.311 68.850 47.879 1.00 51.06 O
ATOM 4 OP2 G B 731 41.370 67.368 49.685 1.00 53.13 O
ATOM 5 O5' G B 731 40.563 66.389 47.552 1.00 55.62 O
ATOM 6 C5' G B 731 40.404 66.321 46.122 1.00 56.07 C
ATOM 7 C4' G B 731 39.085 65.669 45.776 1.00 56.44 C
ATOM 8 O4' G B 731 39.059 64.312 46.287 1.00 56.94 O
ATOM 9 C3' G B 731 37.852 66.314 46.385 1.00 55.83 C
ATOM 10 O3' G B 731 37.421 67.406 45.598 1.00 55.00 O
ATOM 11 C2' G B 731 36.845 65.175 46.359 1.00 57.31 C
ATOM 12 O2' G B 731 36.294 64.992 45.071 1.00 58.91 O
ATOM 13 C1' G B 731 37.740 63.979 46.695 1.00 57.85 C
ATOM 14 N9 G B 731 37.779 63.636 48.113 1.00 57.68 N
ATOM 15 C8 G B 731 37.686 64.496 49.179 1.00 58.06 C
ATOM 16 N7 G B 731 37.790 63.895 50.331 1.00 59.21 N
ATOM 17 C5 G B 731 37.954 62.558 50.007 1.00 58.88 C
ATOM 18 C6 G B 731 38.126 61.429 50.842 1.00 59.53 C
ATOM 19 O6 G B 731 38.175 61.385 52.076 1.00 60.36 O
ATOM 20 N1 G B 731 38.248 60.259 50.101 1.00 59.78 N
ATOM 21 C2 G B 731 38.209 60.185 48.734 1.00 59.25 C
ATOM 22 N2 G B 731 38.332 58.961 48.210 1.00 59.31 N
ATOM 23 N3 G B 731 38.057 61.232 47.942 1.00 58.67 N
ATOM 24 C4 G B 731 37.937 62.379 48.642 1.00 58.52 C
ATOM 25 P G B 732 36.200 68.311 46.099 1.00 55.75 P
ATOM 26 OP1 G B 732 36.437 68.571 47.543 1.00 55.58 O
ATOM 27 OP2 G B 732 34.933 67.665 45.674 1.00 56.25 O
ATOM 28 O5' G B 732 36.373 69.659 45.265 1.00 55.32 O
TER
ATOM 2 P G A 690 34.193 54.884 45.086 1.00 70.45 P
ATOM 3 OP1 G A 690 35.248 54.461 44.123 1.00 68.39 O
ATOM 4 OP2 G A 690 32.777 54.967 44.635 1.00 69.35 O
ATOM 5 O5' G A 690 34.273 53.965 46.388 1.00 71.00 O
ATOM 6 C5' G A 690 34.651 52.582 46.304 1.00 72.17 C
ATOM 7 C4' G A 690 35.240 52.107 47.618 1.00 72.40 C
ATOM 8 O4' G A 690 36.550 52.700 47.838 1.00 72.76 O
ATOM 9 C3' G A 690 34.486 52.458 48.888 1.00 71.43 C
ATOM 10 O3' G A 690 33.337 51.654 49.094 1.00 69.72 O
ATOM 11 C2' G A 690 35.557 52.236 49.948 1.00 72.25 C
ATOM 12 O2' G A 690 35.773 50.877 50.272 1.00 72.03 O
ATOM 13 C1' G A 690 36.793 52.792 49.237 1.00 73.14 C
ATOM 14 N9 G A 690 37.003 54.191 49.596 1.00 74.45 N
ATOM 15 C8 G A 690 36.843 55.303 48.803 1.00 74.61 C
ATOM 16 N7 G A 690 37.056 56.421 49.442 1.00 74.93 N
ATOM 17 C5 G A 690 37.387 56.023 50.730 1.00 75.58 C
ATOM 18 C6 G A 690 37.708 56.792 51.880 1.00 76.52 C
ATOM 19 O6 G A 690 37.760 58.026 51.996 1.00 77.11 O
ATOM 20 N1 G A 690 37.980 55.978 52.978 1.00 76.10 N
ATOM 21 C2 G A 690 37.940 54.607 52.976 1.00 74.74 C
ATOM 22 N2 G A 690 38.219 54.001 54.135 1.00 73.91 N
ATOM 23 N3 G A 690 37.641 53.883 51.915 1.00 74.91 N
ATOM 24 C4 G A 690 37.375 54.650 50.836 1.00 75.16 C
ATOM 25 P G A 691 32.125 52.223 49.985 1.00 70.00 P
ATOM 26 OP1 G A 691 30.966 51.334 49.769 1.00 71.30 O
ATOM 27 OP2 G A 691 31.980 53.683 49.755 1.00 69.83 O
ATOM 28 O5' G A 691 32.622 51.992 51.477 1.00 69.18 O
TER
ATOM 1 O3' G B 730 42.585 67.860 47.535 1.00 51.88 O
ATOM 2 P G B 731 41.161 67.686 48.252 1.00 52.98 P
ATOM 3 OP1 G B 731 40.311 68.850 47.879 1.00 51.06 O
ATOM 4 OP2 G B 731 41.370 67.368 49.685 1.00 53.13 O
ATOM 5 O5' G B 731 40.563 66.389 47.552 1.00 55.62 O
ATOM 6 C5' G B 731 40.404 66.321 46.122 1.00 56.07 C
ATOM 7 C4' G B 731 39.085 65.669 45.776 1.00 56.44 C
ATOM 8 O4' G B 731 39.059 64.312 46.287 1.00 56.94 O
ATOM 9 C3' G B 731 37.852 66.314 46.385 1.00 55.83 C
ATOM 10 O3' G B 731 37.421 67.406 45.598 1.00 55.00 O
ATOM 11 C2' G B 731 36.845 65.175 46.359 1.00 57.31 C
ATOM 12 O2' G B 731 36.294 64.992 45.071 1.00 58.91 O
ATOM 13 C1' G B 731 37.740 63.979 46.695 1.00 57.85 C
ATOM 14 N9 G B 731 37.779 63.636 48.113 1.00 57.68 N
ATOM 15 C8 G B 731 37.686 64.496 49.179 1.00 58.06 C
ATOM 16 N7 G B 731 37.790 63.895 50.331 1.00 59.21 N
ATOM 17 C5 G B 731 37.954 62.558 50.007 1.00 58.88 C
ATOM 18 C6 G B 731 38.126 61.429 50.842 1.00 59.53 C
ATOM 19 O6 G B 731 38.175 61.385 52.076 1.00 60.36 O
ATOM 20 N1 G B 731 38.248 60.259 50.101 1.00 59.78 N
ATOM 21 C2 G B 731 38.209 60.185 48.734 1.00 59.25 C
ATOM 22 N2 G B 731 38.332 58.961 48.210 1.00 59.31 N
ATOM 23 N3 G B 731 38.057 61.232 47.942 1.00 58.67 N
ATOM 24 C4 G B 731 37.937 62.379 48.642 1.00 58.52 C
ATOM 25 P G B 732 36.200 68.311 46.099 1.00 55.75 P
ATOM 26 OP1 G B 732 36.437 68.571 47.543 1.00 55.58 O
ATOM 27 OP2 G B 732 34.933 67.665 45.674 1.00 56.25 O
ATOM 28 O5' G B 732 36.373 69.659 45.265 1.00 55.32 O
TER
Atoms:
OP1: (35.248,54.461,44.123)
OP2: (32.777,54.967,44.635)
C3': (34.486,52.458,48.888)
C1': (36.793,52.792,49.237)
C5': (34.651,52.582,46.304)
O6: (37.760,58.026,51.996)
O4': (36.550,52.700,47.838)
C8: (36.843,55.303,48.803)
C2: (37.940,54.607,52.976)
C6: (37.708,56.792,51.880)
C5: (37.387,56.023,50.730)
C4: (37.375,54.650,50.836)
P: (34.193,54.884,45.086)
C4': (35.240,52.107,47.618)
C2': (35.557,52.236,49.948)
O2': (35.773,50.877,50.272)
N1: (37.980,55.978,52.978)
N2: (38.219,54.001,54.135)
N3: (37.641,53.883,51.915)
N7: (37.056,56.421,49.442)
N9: (37.003,54.191,49.596)
O5': (34.273,53.965,46.388)
O3': (33.337,51.654,49.094)
OP2: (32.777,54.967,44.635)
C3': (34.486,52.458,48.888)
C1': (36.793,52.792,49.237)
C5': (34.651,52.582,46.304)
O6: (37.760,58.026,51.996)
O4': (36.550,52.700,47.838)
C8: (36.843,55.303,48.803)
C2: (37.940,54.607,52.976)
C6: (37.708,56.792,51.880)
C5: (37.387,56.023,50.730)
C4: (37.375,54.650,50.836)
P: (34.193,54.884,45.086)
C4': (35.240,52.107,47.618)
C2': (35.557,52.236,49.948)
O2': (35.773,50.877,50.272)
N1: (37.980,55.978,52.978)
N2: (38.219,54.001,54.135)
N3: (37.641,53.883,51.915)
N7: (37.056,56.421,49.442)
N9: (37.003,54.191,49.596)
O5': (34.273,53.965,46.388)
O3': (33.337,51.654,49.094)
OP1: (40.311,68.850,47.879)
OP2: (41.370,67.368,49.685)
C3': (37.852,66.314,46.385)
C1': (37.740,63.979,46.695)
C5': (40.404,66.321,46.122)
O6: (38.175,61.385,52.076)
O4': (39.059,64.312,46.287)
C8: (37.686,64.496,49.179)
C2: (38.209,60.185,48.734)
C6: (38.126,61.429,50.842)
C5: (37.954,62.558,50.007)
C4: (37.937,62.379,48.642)
P: (41.161,67.686,48.252)
C4': (39.085,65.669,45.776)
C2': (36.845,65.175,46.359)
O2': (36.294,64.992,45.071)
N1: (38.248,60.259,50.101)
N2: (38.332,58.961,48.210)
N3: (38.057,61.232,47.942)
N7: (37.790,63.895,50.331)
N9: (37.779,63.636,48.113)
O5': (40.563,66.389,47.552)
O3': (37.421,67.406,45.598)
OP2: (41.370,67.368,49.685)
C3': (37.852,66.314,46.385)
C1': (37.740,63.979,46.695)
C5': (40.404,66.321,46.122)
O6: (38.175,61.385,52.076)
O4': (39.059,64.312,46.287)
C8: (37.686,64.496,49.179)
C2: (38.209,60.185,48.734)
C6: (38.126,61.429,50.842)
C5: (37.954,62.558,50.007)
C4: (37.937,62.379,48.642)
P: (41.161,67.686,48.252)
C4': (39.085,65.669,45.776)
C2': (36.845,65.175,46.359)
O2': (36.294,64.992,45.071)
N1: (38.248,60.259,50.101)
N2: (38.332,58.961,48.210)
N3: (38.057,61.232,47.942)
N7: (37.790,63.895,50.331)
N9: (37.779,63.636,48.113)
O5': (40.563,66.389,47.552)
O3': (37.421,67.406,45.598)
Image (generated by PyMOL):