ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2AWE:A2:C2

Extra

PDB:
ATOM 1 P G A 2 34.302 -3.921 9.125 1.00 19.00 P
ATOM 2 OP1 G A 2 34.854 -5.290 9.230 1.00 15.94 O
ATOM 3 OP2 G A 2 34.895 -2.778 9.836 1.00 15.33 O
ATOM 4 O5' G A 2 34.197 -3.518 7.554 1.00 14.30 O
ATOM 5 C5' G A 2 33.601 -4.353 6.577 1.00 12.05 C
ATOM 6 C4' G A 2 33.349 -3.560 5.283 1.00 12.89 C
ATOM 7 O4' G A 2 32.275 -2.582 5.503 1.00 11.51 O
ATOM 8 C3' G A 2 34.539 -2.790 4.679 1.00 11.92 C
ATOM 9 O3' G A 2 34.911 -3.311 3.370 1.00 14.99 O
ATOM 10 C2' G A 2 33.989 -1.355 4.575 1.00 13.96 C
ATOM 11 O2' G A 2 34.429 -0.714 3.383 1.00 14.62 O
ATOM 12 C1' G A 2 32.455 -1.528 4.581 1.00 11.53 C
ATOM 13 N9 G A 2 31.626 -0.382 4.989 1.00 10.56 N
ATOM 14 C8 G A 2 31.766 0.367 6.163 1.00 11.76 C
ATOM 15 N7 G A 2 30.884 1.344 6.281 1.00 11.29 N
ATOM 16 C5 G A 2 30.110 1.232 5.125 1.00 8.37 C
ATOM 17 C6 G A 2 29.006 2.010 4.691 1.00 9.25 C
ATOM 18 O6 G A 2 28.482 2.983 5.257 1.00 9.19 O
ATOM 19 N1 G A 2 28.471 1.599 3.453 1.00 6.92 N
ATOM 20 C2 G A 2 28.969 0.537 2.732 1.00 7.22 C
ATOM 21 N2 G A 2 28.351 0.280 1.549 1.00 8.55 N
ATOM 22 N3 G A 2 30.012 -0.207 3.129 1.00 6.26 N
ATOM 23 C4 G A 2 30.550 0.192 4.321 1.00 9.00 C
ATOM 24 P U A 3 36.417 -3.715 2.958 1.00 15.27 P
ATOM 25 OP1 U A 3 36.942 -4.616 3.998 1.00 15.36 O
ATOM 26 OP2 U A 3 37.178 -2.493 2.640 1.00 15.06 O
ATOM 27 O5' U A 3 36.298 -4.532 1.553 1.00 16.14 O
TER

ATOM 1 P G B 2 27.500 10.686 15.559 1.00 22.54 P
ATOM 2 OP1 G B 2 27.839 10.827 16.979 1.00 25.95 O
ATOM 3 OP2 G B 2 27.109 11.855 14.754 1.00 21.80 O
ATOM 4 O5' G B 2 28.766 9.964 14.844 1.00 21.81 O
ATOM 5 C5' G B 2 29.448 8.774 15.345 1.00 19.32 C
ATOM 6 C4' G B 2 30.296 8.117 14.255 1.00 17.99 C
ATOM 7 O4' G B 2 29.418 7.641 13.183 1.00 18.46 O
ATOM 8 C3' G B 2 31.343 9.039 13.578 1.00 18.87 C
ATOM 9 O3' G B 2 32.731 8.694 13.963 1.00 19.76 O
ATOM 10 C2' G B 2 31.066 8.859 12.067 1.00 17.08 C
ATOM 11 O2' G B 2 32.279 8.740 11.329 1.00 15.04 O
ATOM 12 C1' G B 2 30.200 7.580 11.994 1.00 16.39 C
ATOM 13 N9 G B 2 29.357 7.427 10.776 1.00 13.61 N
ATOM 14 C8 G B 2 28.384 8.296 10.303 1.00 10.93 C
ATOM 15 N7 G B 2 27.806 7.897 9.184 1.00 10.80 N
ATOM 16 C5 G B 2 28.420 6.681 8.898 1.00 9.98 C
ATOM 17 C6 G B 2 28.224 5.780 7.810 1.00 11.13 C
ATOM 18 O6 G B 2 27.434 5.905 6.861 1.00 8.65 O
ATOM 19 N1 G B 2 29.082 4.661 7.860 1.00 11.72 N
ATOM 20 C2 G B 2 30.016 4.435 8.885 1.00 12.32 C
ATOM 21 N2 G B 2 30.763 3.295 8.813 1.00 10.22 N
ATOM 22 N3 G B 2 30.196 5.270 9.919 1.00 11.14 N
ATOM 23 C4 G B 2 29.383 6.375 9.867 1.00 12.75 C
ATOM 24 P U B 3 33.818 9.722 14.623 1.00 24.42 P
ATOM 25 OP1 U B 3 33.188 10.595 15.627 1.00 23.76 O
ATOM 26 OP2 U B 3 34.518 10.354 13.492 1.00 22.52 O
ATOM 27 O5' U B 3 34.828 8.759 15.416 1.00 22.37 O
TER

Atoms:
OP1: (34.854,-5.290,9.230)
OP2: (34.895,-2.778,9.836)
C3': (34.539,-2.790,4.679)
C1': (32.455,-1.528,4.581)
C5': (33.601,-4.353,6.577)
O6: (28.482,2.983,5.257)
O4': (32.275,-2.582,5.503)
C8: (31.766,0.367,6.163)
C2: (28.969,0.537,2.732)
C6: (29.006,2.010,4.691)
C5: (30.110,1.232,5.125)
C4: (30.550,0.192,4.321)
P: (34.302,-3.921,9.125)
C4': (33.349,-3.560,5.283)
C2': (33.989,-1.355,4.575)
O2': (34.429,-0.714,3.383)
N1: (28.471,1.599,3.453)
N2: (28.351,0.280,1.549)
N3: (30.012,-0.207,3.129)
N7: (30.884,1.344,6.281)
N9: (31.626,-0.382,4.989)
O5': (34.197,-3.518,7.554)
O3': (34.911,-3.311,3.370)
OP1: (27.839,10.827,16.979)
OP2: (27.109,11.855,14.754)
C3': (31.343,9.039,13.578)
C1': (30.200,7.580,11.994)
C5': (29.448,8.774,15.345)
O6: (27.434,5.905,6.861)
O4': (29.418,7.641,13.183)
C8: (28.384,8.296,10.303)
C2: (30.016,4.435,8.885)
C6: (28.224,5.780,7.810)
C5: (28.420,6.681,8.898)
C4: (29.383,6.375,9.867)
P: (27.500,10.686,15.559)
C4': (30.296,8.117,14.255)
C2': (31.066,8.859,12.067)
O2': (32.279,8.740,11.329)
N1: (29.082,4.661,7.860)
N2: (30.763,3.295,8.813)
N3: (30.196,5.270,9.919)
N7: (27.806,7.897,9.184)
N9: (29.357,7.427,10.776)
O5': (28.766,9.964,14.844)
O3': (32.731,8.694,13.963)
Image (generated by PyMOL):
PyMOL image
show in jmol