ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2AWE:D2:A2

Extra

PDB:
ATOM 1 P G A 2 24.593 -2.416 -4.607 1.00 16.14 P
ATOM 2 OP1 G A 2 23.768 -2.961 -5.724 1.00 16.72 O
ATOM 3 OP2 G A 2 25.937 -2.981 -4.356 1.00 16.22 O
ATOM 4 O5' G A 2 24.704 -0.843 -4.803 1.00 14.49 O
ATOM 5 C5' G A 2 23.550 0.012 -5.091 1.00 16.42 C
ATOM 6 C4' G A 2 23.901 1.488 -4.877 1.00 14.74 C
ATOM 7 O4' G A 2 23.978 1.725 -3.449 1.00 13.75 O
ATOM 8 C3' G A 2 25.215 2.006 -5.474 1.00 17.25 C
ATOM 9 O3' G A 2 25.005 2.906 -6.639 1.00 20.10 O
ATOM 10 C2' G A 2 25.940 2.684 -4.278 1.00 14.45 C
ATOM 11 O2' G A 2 26.473 3.971 -4.583 1.00 16.36 O
ATOM 12 C1' G A 2 24.860 2.802 -3.174 1.00 12.67 C
ATOM 13 N9 G A 2 25.338 2.786 -1.752 1.00 12.03 N
ATOM 14 C8 G A 2 26.217 1.902 -1.164 1.00 9.39 C
ATOM 15 N7 G A 2 26.466 2.132 0.125 1.00 10.59 N
ATOM 16 C5 G A 2 25.737 3.282 0.398 1.00 10.18 C
ATOM 17 C6 G A 2 25.624 4.003 1.619 1.00 12.28 C
ATOM 18 O6 G A 2 26.181 3.757 2.715 1.00 11.19 O
ATOM 19 N1 G A 2 24.785 5.111 1.528 1.00 9.71 N
ATOM 20 C2 G A 2 24.106 5.479 0.373 1.00 11.87 C
ATOM 21 N2 G A 2 23.329 6.593 0.507 1.00 8.82 N
ATOM 22 N3 G A 2 24.199 4.801 -0.790 1.00 9.94 N
ATOM 23 C4 G A 2 25.029 3.705 -0.721 1.00 11.85 C
ATOM 24 P U A 3 25.346 2.446 -8.174 1.00 22.79 P
ATOM 25 OP1 U A 3 24.298 1.516 -8.629 1.00 21.80 O
ATOM 26 OP2 U A 3 26.741 2.000 -8.274 1.00 23.76 O
ATOM 27 O5' U A 3 25.196 3.874 -8.891 1.00 24.70 O
TER

ATOM 1 P G B 2 34.302 -3.921 9.125 1.00 19.00 P
ATOM 2 OP1 G B 2 34.854 -5.290 9.230 1.00 15.94 O
ATOM 3 OP2 G B 2 34.895 -2.778 9.836 1.00 15.33 O
ATOM 4 O5' G B 2 34.197 -3.518 7.554 1.00 14.30 O
ATOM 5 C5' G B 2 33.601 -4.353 6.577 1.00 12.05 C
ATOM 6 C4' G B 2 33.349 -3.560 5.283 1.00 12.89 C
ATOM 7 O4' G B 2 32.275 -2.582 5.503 1.00 11.51 O
ATOM 8 C3' G B 2 34.539 -2.790 4.679 1.00 11.92 C
ATOM 9 O3' G B 2 34.911 -3.311 3.370 1.00 14.99 O
ATOM 10 C2' G B 2 33.989 -1.355 4.575 1.00 13.96 C
ATOM 11 O2' G B 2 34.429 -0.714 3.383 1.00 14.62 O
ATOM 12 C1' G B 2 32.455 -1.528 4.581 1.00 11.53 C
ATOM 13 N9 G B 2 31.626 -0.382 4.989 1.00 10.56 N
ATOM 14 C8 G B 2 31.766 0.367 6.163 1.00 11.76 C
ATOM 15 N7 G B 2 30.884 1.344 6.281 1.00 11.29 N
ATOM 16 C5 G B 2 30.110 1.232 5.125 1.00 8.37 C
ATOM 17 C6 G B 2 29.006 2.010 4.691 1.00 9.25 C
ATOM 18 O6 G B 2 28.482 2.983 5.257 1.00 9.19 O
ATOM 19 N1 G B 2 28.471 1.599 3.453 1.00 6.92 N
ATOM 20 C2 G B 2 28.969 0.537 2.732 1.00 7.22 C
ATOM 21 N2 G B 2 28.351 0.280 1.549 1.00 8.55 N
ATOM 22 N3 G B 2 30.012 -0.207 3.129 1.00 6.26 N
ATOM 23 C4 G B 2 30.550 0.192 4.321 1.00 9.00 C
ATOM 24 P U B 3 36.417 -3.715 2.958 1.00 15.27 P
ATOM 25 OP1 U B 3 36.942 -4.616 3.998 1.00 15.36 O
ATOM 26 OP2 U B 3 37.178 -2.493 2.640 1.00 15.06 O
ATOM 27 O5' U B 3 36.298 -4.532 1.553 1.00 16.14 O
TER

Atoms:
OP1: (23.768,-2.961,-5.724)
OP2: (25.937,-2.981,-4.356)
C3': (25.215,2.006,-5.474)
C1': (24.860,2.802,-3.174)
C5': (23.550,0.012,-5.091)
O6: (26.181,3.757,2.715)
O4': (23.978,1.725,-3.449)
C8: (26.217,1.902,-1.164)
C2: (24.106,5.479,0.373)
C6: (25.624,4.003,1.619)
C5: (25.737,3.282,0.398)
C4: (25.029,3.705,-0.721)
P: (24.593,-2.416,-4.607)
C4': (23.901,1.488,-4.877)
C2': (25.940,2.684,-4.278)
O2': (26.473,3.971,-4.583)
N1: (24.785,5.111,1.528)
N2: (23.329,6.593,0.507)
N3: (24.199,4.801,-0.790)
N7: (26.466,2.132,0.125)
N9: (25.338,2.786,-1.752)
O5': (24.704,-0.843,-4.803)
O3': (25.005,2.906,-6.639)
OP1: (34.854,-5.290,9.230)
OP2: (34.895,-2.778,9.836)
C3': (34.539,-2.790,4.679)
C1': (32.455,-1.528,4.581)
C5': (33.601,-4.353,6.577)
O6: (28.482,2.983,5.257)
O4': (32.275,-2.582,5.503)
C8: (31.766,0.367,6.163)
C2: (28.969,0.537,2.732)
C6: (29.006,2.010,4.691)
C5: (30.110,1.232,5.125)
C4: (30.550,0.192,4.321)
P: (34.302,-3.921,9.125)
C4': (33.349,-3.560,5.283)
C2': (33.989,-1.355,4.575)
O2': (34.429,-0.714,3.383)
N1: (28.471,1.599,3.453)
N2: (28.351,0.280,1.549)
N3: (30.012,-0.207,3.129)
N7: (30.884,1.344,6.281)
N9: (31.626,-0.382,4.989)
O5': (34.197,-3.518,7.554)
O3': (34.911,-3.311,3.370)
Image (generated by PyMOL):
PyMOL image
show in jmol