ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2AWE:E2:G2

Extra

PDB:
ATOM 1 P G A 2 12.658 -8.761 1.540 1.00 21.90 P
ATOM 2 OP1 G A 2 12.898 -9.606 0.337 1.00 18.62 O
ATOM 3 OP2 G A 2 11.350 -8.094 1.726 1.00 18.17 O
ATOM 4 O5' G A 2 12.873 -9.611 2.908 1.00 19.39 O
ATOM 5 C5' G A 2 13.827 -10.660 3.036 1.00 20.18 C
ATOM 6 C4' G A 2 14.005 -11.099 4.490 1.00 19.85 C
ATOM 7 O4' G A 2 14.279 -9.945 5.300 1.00 18.06 O
ATOM 8 C3' G A 2 12.827 -11.814 5.179 1.00 19.49 C
ATOM 9 O3' G A 2 13.155 -13.182 5.527 1.00 23.69 O
ATOM 10 C2' G A 2 12.577 -10.958 6.434 1.00 16.71 C
ATOM 11 O2' G A 2 12.197 -11.727 7.559 1.00 16.27 O
ATOM 12 C1' G A 2 13.900 -10.223 6.640 1.00 16.75 C
ATOM 13 N9 G A 2 13.832 -8.931 7.394 1.00 16.50 N
ATOM 14 C8 G A 2 13.032 -7.842 7.093 1.00 14.92 C
ATOM 15 N7 G A 2 13.158 -6.810 7.912 1.00 15.00 N
ATOM 16 C5 G A 2 14.129 -7.228 8.811 1.00 14.70 C
ATOM 17 C6 G A 2 14.680 -6.547 9.933 1.00 15.20 C
ATOM 18 O6 G A 2 14.410 -5.389 10.363 1.00 13.86 O
ATOM 19 N1 G A 2 15.628 -7.332 10.611 1.00 13.20 N
ATOM 20 C2 G A 2 15.977 -8.614 10.241 1.00 15.69 C
ATOM 21 N2 G A 2 16.918 -9.218 10.988 1.00 14.06 N
ATOM 22 N3 G A 2 15.458 -9.255 9.193 1.00 14.85 N
ATOM 23 C4 G A 2 14.531 -8.532 8.526 1.00 14.84 C
ATOM 24 P U A 3 13.094 -14.446 4.496 1.00 25.28 P
ATOM 25 OP1 U A 3 14.460 -14.679 3.996 1.00 24.19 O
ATOM 26 OP2 U A 3 11.975 -14.229 3.565 1.00 26.98 O
ATOM 27 O5' U A 3 12.737 -15.694 5.450 1.00 27.49 O
TER

ATOM 1 P G B 2 7.632 5.341 9.187 1.00 21.05 P
ATOM 2 OP1 G B 2 6.895 6.289 8.284 1.00 18.78 O
ATOM 3 OP2 G B 2 7.525 5.475 10.685 1.00 19.66 O
ATOM 4 O5' G B 2 7.205 3.824 8.832 1.00 19.67 O
ATOM 5 C5' G B 2 7.224 3.315 7.486 1.00 20.16 C
ATOM 6 C4' G B 2 7.221 1.783 7.527 1.00 19.71 C
ATOM 7 O4' G B 2 8.443 1.302 8.116 1.00 18.28 O
ATOM 8 C3' G B 2 6.081 1.182 8.359 1.00 20.40 C
ATOM 9 O3' G B 2 5.157 0.499 7.494 1.00 25.40 O
ATOM 10 C2' G B 2 6.826 0.257 9.339 1.00 17.85 C
ATOM 11 O2' G B 2 6.139 -0.968 9.573 1.00 17.58 O
ATOM 12 C1' G B 2 8.189 0.021 8.685 1.00 16.20 C
ATOM 13 N9 G B 2 9.317 -0.367 9.601 1.00 15.31 N
ATOM 14 C8 G B 2 9.667 0.273 10.740 1.00 13.52 C
ATOM 15 N7 G B 2 10.735 -0.310 11.331 1.00 14.41 N
ATOM 16 C5 G B 2 11.098 -1.362 10.562 1.00 11.76 C
ATOM 17 C6 G B 2 12.139 -2.428 10.630 1.00 14.08 C
ATOM 18 O6 G B 2 12.991 -2.481 11.583 1.00 12.11 O
ATOM 19 N1 G B 2 12.179 -3.333 9.617 1.00 10.90 N
ATOM 20 C2 G B 2 11.300 -3.306 8.592 1.00 12.46 C
ATOM 21 N2 G B 2 11.406 -4.263 7.645 1.00 11.86 N
ATOM 22 N3 G B 2 10.300 -2.366 8.481 1.00 11.89 N
ATOM 23 C4 G B 2 10.155 -1.393 9.425 1.00 12.19 C
TER

Atoms:
OP1: (12.898,-9.606,0.337)
OP2: (11.350,-8.094,1.726)
C3': (12.827,-11.814,5.179)
C1': (13.900,-10.223,6.640)
C5': (13.827,-10.660,3.036)
O6: (14.410,-5.389,10.363)
O4': (14.279,-9.945,5.300)
C8: (13.032,-7.842,7.093)
C2: (15.977,-8.614,10.241)
C6: (14.680,-6.547,9.933)
C5: (14.129,-7.228,8.811)
C4: (14.531,-8.532,8.526)
P: (12.658,-8.761,1.540)
C4': (14.005,-11.099,4.490)
C2': (12.577,-10.958,6.434)
O2': (12.197,-11.727,7.559)
N1: (15.628,-7.332,10.611)
N2: (16.918,-9.218,10.988)
N3: (15.458,-9.255,9.193)
N7: (13.158,-6.810,7.912)
N9: (13.832,-8.931,7.394)
O5': (12.873,-9.611,2.908)
O3': (13.155,-13.182,5.527)
OP1: (6.895,6.289,8.284)
OP2: (7.525,5.475,10.685)
C3': (6.081,1.182,8.359)
C1': (8.189,0.021,8.685)
C5': (7.224,3.315,7.486)
O6: (12.991,-2.481,11.583)
O4': (8.443,1.302,8.116)
C8: (9.667,0.273,10.740)
C2: (11.300,-3.306,8.592)
C6: (12.139,-2.428,10.630)
C5: (11.098,-1.362,10.562)
C4: (10.155,-1.393,9.425)
P: (7.632,5.341,9.187)
C4': (7.221,1.783,7.527)
C2': (6.826,0.257,9.339)
O2': (6.139,-0.968,9.573)
N1: (12.179,-3.333,9.617)
N2: (11.406,-4.263,7.645)
N3: (10.300,-2.366,8.481)
N7: (10.735,-0.310,11.331)
N9: (9.317,-0.367,9.601)
O5': (7.205,3.824,8.832)
O3': (5.157,0.499,7.494)
Image (generated by PyMOL):
PyMOL image
show in jmol