ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A63:A59

Extra

PDB:
ATOM 1 O3' C A 62 100.888 36.423 9.344 1.00 41.23 O
ATOM 2 P G A 63 100.727 35.568 10.701 1.00 42.23 P
ATOM 3 OP1 G A 63 99.366 34.966 10.563 1.00 41.05 O
ATOM 4 OP2 G A 63 101.081 36.372 11.903 1.00 40.75 O
ATOM 5 O5' G A 63 101.802 34.423 10.537 1.00 40.98 O
ATOM 6 C5' G A 63 101.654 33.452 9.499 1.00 41.32 C
ATOM 7 C4' G A 63 102.911 32.646 9.359 1.00 41.95 C
ATOM 8 O4' G A 63 103.992 33.511 8.921 1.00 42.32 O
ATOM 9 C3' G A 63 103.448 32.001 10.625 1.00 42.43 C
ATOM 10 O3' G A 63 102.778 30.788 10.954 1.00 44.79 O
ATOM 11 C2' G A 63 104.914 31.785 10.269 1.00 41.64 C
ATOM 12 O2' G A 63 105.113 30.632 9.475 1.00 41.96 O
ATOM 13 C1' G A 63 105.221 33.034 9.441 1.00 39.90 C
ATOM 14 N9 G A 63 105.838 34.067 10.272 1.00 35.50 N
ATOM 15 C8 G A 63 105.224 35.067 10.987 1.00 33.54 C
ATOM 16 N7 G A 63 106.062 35.764 11.712 1.00 30.67 N
ATOM 17 C5 G A 63 107.301 35.204 11.438 1.00 30.68 C
ATOM 18 C6 G A 63 108.584 35.523 11.943 1.00 31.44 C
ATOM 19 O6 G A 63 108.894 36.390 12.764 1.00 32.88 O
ATOM 20 N1 G A 63 109.567 34.704 11.400 1.00 31.40 N
ATOM 21 C2 G A 63 109.340 33.695 10.492 1.00 33.60 C
ATOM 22 N2 G A 63 110.417 32.991 10.081 1.00 34.68 N
ATOM 23 N3 G A 63 108.147 33.389 10.018 1.00 33.34 N
ATOM 24 C4 G A 63 107.182 34.175 10.533 1.00 33.02 C
ATOM 25 P G A 64 103.144 30.021 12.327 1.00 45.29 P
ATOM 26 OP1 G A 64 102.192 28.880 12.412 1.00 44.46 O
ATOM 27 OP2 G A 64 103.228 31.013 13.426 1.00 44.64 O
ATOM 28 O5' G A 64 104.597 29.441 12.018 1.00 45.66 O
TER

ATOM 1 O3' C B 58 107.228 48.267 15.569 1.00 38.32 O
ATOM 2 P G B 59 107.280 47.242 16.796 1.00 38.92 P
ATOM 3 OP1 G B 59 106.157 47.626 17.715 1.00 38.75 O
ATOM 4 OP2 G B 59 108.677 47.162 17.313 1.00 34.69 O
ATOM 5 O5' G B 59 106.899 45.881 16.064 1.00 39.87 O
ATOM 6 C5' G B 59 105.728 45.802 15.208 1.00 40.13 C
ATOM 7 C4' G B 59 104.885 44.615 15.613 1.00 41.90 C
ATOM 8 O4' G B 59 105.581 43.391 15.242 1.00 41.43 O
ATOM 9 C3' G B 59 104.643 44.533 17.124 1.00 41.88 C
ATOM 10 O3' G B 59 103.368 43.954 17.376 1.00 42.85 O
ATOM 11 C2' G B 59 105.742 43.579 17.584 1.00 40.87 C
ATOM 12 O2' G B 59 105.449 42.914 18.789 1.00 40.83 O
ATOM 13 C1' G B 59 105.803 42.619 16.398 1.00 40.02 C
ATOM 14 N9 G B 59 107.024 41.849 16.210 1.00 37.47 N
ATOM 15 C8 G B 59 108.275 42.066 16.739 1.00 37.91 C
ATOM 16 N7 G B 59 109.142 41.150 16.388 1.00 37.41 N
ATOM 17 C5 G B 59 108.416 40.288 15.574 1.00 36.72 C
ATOM 18 C6 G B 59 108.809 39.111 14.902 1.00 35.50 C
ATOM 19 O6 G B 59 109.912 38.570 14.892 1.00 38.05 O
ATOM 20 N1 G B 59 107.757 38.555 14.181 1.00 33.92 N
ATOM 21 C2 G B 59 106.486 39.067 14.115 1.00 34.30 C
ATOM 22 N2 G B 59 105.609 38.405 13.346 1.00 32.96 N
ATOM 23 N3 G B 59 106.102 40.156 14.751 1.00 35.62 N
ATOM 24 C4 G B 59 107.112 40.713 15.452 1.00 37.13 C
ATOM 25 P U B 60 102.172 44.858 17.957 1.00 45.12 P
ATOM 26 OP1 U B 60 101.100 43.891 18.349 1.00 45.59 O
ATOM 27 OP2 U B 60 102.726 45.818 18.957 1.00 45.25 O
ATOM 28 O5' U B 60 101.634 45.663 16.703 1.00 44.67 O
TER

Atoms:
OP1: (99.366,34.966,10.563)
OP2: (101.081,36.372,11.903)
C3': (103.448,32.001,10.625)
C1': (105.221,33.034,9.441)
C5': (101.654,33.452,9.499)
O6: (108.894,36.390,12.764)
O4': (103.992,33.511,8.921)
C8: (105.224,35.067,10.987)
C2: (109.340,33.695,10.492)
C6: (108.584,35.523,11.943)
C5: (107.301,35.204,11.438)
C4: (107.182,34.175,10.533)
P: (100.727,35.568,10.701)
C4': (102.911,32.646,9.359)
C2': (104.914,31.785,10.269)
O2': (105.113,30.632,9.475)
N1: (109.567,34.704,11.400)
N2: (110.417,32.991,10.081)
N3: (108.147,33.389,10.018)
N7: (106.062,35.764,11.712)
N9: (105.838,34.067,10.272)
O5': (101.802,34.423,10.537)
O3': (102.778,30.788,10.954)
OP1: (106.157,47.626,17.715)
OP2: (108.677,47.162,17.313)
C3': (104.643,44.533,17.124)
C1': (105.803,42.619,16.398)
C5': (105.728,45.802,15.208)
O6: (109.912,38.570,14.892)
O4': (105.581,43.391,15.242)
C8: (108.275,42.066,16.739)
C2: (106.486,39.067,14.115)
C6: (108.809,39.111,14.902)
C5: (108.416,40.288,15.574)
C4: (107.112,40.713,15.452)
P: (107.280,47.242,16.796)
C4': (104.885,44.615,15.613)
C2': (105.742,43.579,17.584)
O2': (105.449,42.914,18.789)
N1: (107.757,38.555,14.181)
N2: (105.609,38.405,13.346)
N3: (106.102,40.156,14.751)
N7: (109.142,41.150,16.388)
N9: (107.024,41.849,16.210)
O5': (106.899,45.881,16.064)
O3': (103.368,43.954,17.376)
Image (generated by PyMOL):
PyMOL image
show in jmol