Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B65:B47
Extra
PDB:
ATOM 1 O3' C A 64 4.946 47.981 -16.868 1.00 32.04 O
ATOM 2 P G A 65 3.929 48.683 -17.883 1.00 37.58 P
ATOM 3 OP1 G A 65 2.788 47.768 -18.115 1.00 34.72 O
ATOM 4 OP2 G A 65 4.709 49.191 -19.034 1.00 35.83 O
ATOM 5 O5' G A 65 3.386 49.916 -17.025 1.00 35.38 O
ATOM 6 C5' G A 65 2.640 50.946 -17.652 1.00 35.35 C
ATOM 7 C4' G A 65 1.676 51.570 -16.661 1.00 35.21 C
ATOM 8 O4' G A 65 0.613 50.623 -16.380 1.00 25.92 O
ATOM 9 C3' G A 65 2.283 51.951 -15.312 1.00 31.78 C
ATOM 10 O3' G A 65 1.662 53.131 -14.822 1.00 29.47 O
ATOM 11 C2' G A 65 1.937 50.744 -14.440 1.00 28.81 C
ATOM 12 O2' G A 65 1.798 51.074 -13.074 1.00 31.86 O
ATOM 13 C1' G A 65 0.576 50.350 -14.996 1.00 27.31 C
ATOM 14 N9 G A 65 0.267 48.933 -14.873 1.00 26.93 N
ATOM 15 C8 G A 65 0.721 47.935 -15.700 1.00 28.19 C
ATOM 16 N7 G A 65 0.280 46.753 -15.376 1.00 27.95 N
ATOM 17 C5 G A 65 -0.518 46.991 -14.267 1.00 26.73 C
ATOM 18 C6 G A 65 -1.256 46.080 -13.490 1.00 27.60 C
ATOM 19 O6 G A 65 -1.332 44.858 -13.661 1.00 26.69 O
ATOM 20 N1 G A 65 -1.938 46.708 -12.450 1.00 26.51 N
ATOM 21 C2 G A 65 -1.902 48.061 -12.199 1.00 30.94 C
ATOM 22 N2 G A 65 -2.620 48.495 -11.151 1.00 28.58 N
ATOM 23 N3 G A 65 -1.206 48.929 -12.925 1.00 21.88 N
ATOM 24 C4 G A 65 -0.543 48.326 -13.941 1.00 26.69 C
ATOM 25 P C A 66 2.459 54.520 -14.689 1.00 32.01 P
ATOM 26 OP1 C A 66 3.802 54.251 -14.127 1.00 35.30 O
ATOM 27 OP2 C A 66 1.539 55.457 -14.013 1.00 32.96 O
ATOM 28 O5' C A 66 2.655 54.974 -16.209 1.00 37.89 O
TER
ATOM 1 O3' U B 46 -3.910 36.202 -19.854 1.00 29.11 O
ATOM 2 P G B 47 -2.704 35.485 -19.084 1.00 27.75 P
ATOM 3 OP1 G B 47 -2.376 34.258 -19.838 1.00 31.05 O
ATOM 4 OP2 G B 47 -3.042 35.398 -17.649 1.00 24.27 O
ATOM 5 O5' G B 47 -1.483 36.503 -19.271 1.00 23.28 O
ATOM 6 C5' G B 47 -0.858 36.609 -20.545 1.00 28.18 C
ATOM 7 C4' G B 47 0.101 37.782 -20.586 1.00 27.17 C
ATOM 8 O4' G B 47 -0.639 38.991 -20.291 1.00 28.33 O
ATOM 9 C3' G B 47 1.226 37.765 -19.561 1.00 23.87 C
ATOM 10 O3' G B 47 2.353 37.057 -20.057 1.00 27.33 O
ATOM 11 C2' G B 47 1.555 39.250 -19.453 1.00 27.37 C
ATOM 12 O2' G B 47 2.341 39.701 -20.537 1.00 27.29 O
ATOM 13 C1' G B 47 0.174 39.882 -19.550 1.00 26.93 C
ATOM 14 N9 G B 47 -0.475 40.116 -18.267 1.00 24.14 N
ATOM 15 C8 G B 47 -1.274 39.241 -17.573 1.00 26.40 C
ATOM 16 N7 G B 47 -1.728 39.732 -16.453 1.00 24.48 N
ATOM 17 C5 G B 47 -1.195 41.011 -16.411 1.00 24.87 C
ATOM 18 C6 G B 47 -1.342 42.013 -15.432 1.00 26.67 C
ATOM 19 O6 G B 47 -1.999 41.932 -14.394 1.00 22.36 O
ATOM 20 N1 G B 47 -0.644 43.177 -15.750 1.00 23.55 N
ATOM 21 C2 G B 47 0.107 43.337 -16.892 1.00 27.47 C
ATOM 22 N2 G B 47 0.716 44.522 -17.046 1.00 23.61 N
ATOM 23 N3 G B 47 0.254 42.399 -17.821 1.00 20.62 N
ATOM 24 C4 G B 47 -0.425 41.269 -17.516 1.00 25.27 C
ATOM 25 P A B 48 2.507 35.477 -19.860 1.00 32.64 P
ATOM 26 OP1 A B 48 3.943 35.154 -20.001 1.00 35.45 O
ATOM 27 OP2 A B 48 1.519 34.807 -20.735 1.00 31.08 O
ATOM 28 O5' A B 48 2.111 35.234 -18.332 1.00 26.53 O
TER
ATOM 2 P G A 65 3.929 48.683 -17.883 1.00 37.58 P
ATOM 3 OP1 G A 65 2.788 47.768 -18.115 1.00 34.72 O
ATOM 4 OP2 G A 65 4.709 49.191 -19.034 1.00 35.83 O
ATOM 5 O5' G A 65 3.386 49.916 -17.025 1.00 35.38 O
ATOM 6 C5' G A 65 2.640 50.946 -17.652 1.00 35.35 C
ATOM 7 C4' G A 65 1.676 51.570 -16.661 1.00 35.21 C
ATOM 8 O4' G A 65 0.613 50.623 -16.380 1.00 25.92 O
ATOM 9 C3' G A 65 2.283 51.951 -15.312 1.00 31.78 C
ATOM 10 O3' G A 65 1.662 53.131 -14.822 1.00 29.47 O
ATOM 11 C2' G A 65 1.937 50.744 -14.440 1.00 28.81 C
ATOM 12 O2' G A 65 1.798 51.074 -13.074 1.00 31.86 O
ATOM 13 C1' G A 65 0.576 50.350 -14.996 1.00 27.31 C
ATOM 14 N9 G A 65 0.267 48.933 -14.873 1.00 26.93 N
ATOM 15 C8 G A 65 0.721 47.935 -15.700 1.00 28.19 C
ATOM 16 N7 G A 65 0.280 46.753 -15.376 1.00 27.95 N
ATOM 17 C5 G A 65 -0.518 46.991 -14.267 1.00 26.73 C
ATOM 18 C6 G A 65 -1.256 46.080 -13.490 1.00 27.60 C
ATOM 19 O6 G A 65 -1.332 44.858 -13.661 1.00 26.69 O
ATOM 20 N1 G A 65 -1.938 46.708 -12.450 1.00 26.51 N
ATOM 21 C2 G A 65 -1.902 48.061 -12.199 1.00 30.94 C
ATOM 22 N2 G A 65 -2.620 48.495 -11.151 1.00 28.58 N
ATOM 23 N3 G A 65 -1.206 48.929 -12.925 1.00 21.88 N
ATOM 24 C4 G A 65 -0.543 48.326 -13.941 1.00 26.69 C
ATOM 25 P C A 66 2.459 54.520 -14.689 1.00 32.01 P
ATOM 26 OP1 C A 66 3.802 54.251 -14.127 1.00 35.30 O
ATOM 27 OP2 C A 66 1.539 55.457 -14.013 1.00 32.96 O
ATOM 28 O5' C A 66 2.655 54.974 -16.209 1.00 37.89 O
TER
ATOM 1 O3' U B 46 -3.910 36.202 -19.854 1.00 29.11 O
ATOM 2 P G B 47 -2.704 35.485 -19.084 1.00 27.75 P
ATOM 3 OP1 G B 47 -2.376 34.258 -19.838 1.00 31.05 O
ATOM 4 OP2 G B 47 -3.042 35.398 -17.649 1.00 24.27 O
ATOM 5 O5' G B 47 -1.483 36.503 -19.271 1.00 23.28 O
ATOM 6 C5' G B 47 -0.858 36.609 -20.545 1.00 28.18 C
ATOM 7 C4' G B 47 0.101 37.782 -20.586 1.00 27.17 C
ATOM 8 O4' G B 47 -0.639 38.991 -20.291 1.00 28.33 O
ATOM 9 C3' G B 47 1.226 37.765 -19.561 1.00 23.87 C
ATOM 10 O3' G B 47 2.353 37.057 -20.057 1.00 27.33 O
ATOM 11 C2' G B 47 1.555 39.250 -19.453 1.00 27.37 C
ATOM 12 O2' G B 47 2.341 39.701 -20.537 1.00 27.29 O
ATOM 13 C1' G B 47 0.174 39.882 -19.550 1.00 26.93 C
ATOM 14 N9 G B 47 -0.475 40.116 -18.267 1.00 24.14 N
ATOM 15 C8 G B 47 -1.274 39.241 -17.573 1.00 26.40 C
ATOM 16 N7 G B 47 -1.728 39.732 -16.453 1.00 24.48 N
ATOM 17 C5 G B 47 -1.195 41.011 -16.411 1.00 24.87 C
ATOM 18 C6 G B 47 -1.342 42.013 -15.432 1.00 26.67 C
ATOM 19 O6 G B 47 -1.999 41.932 -14.394 1.00 22.36 O
ATOM 20 N1 G B 47 -0.644 43.177 -15.750 1.00 23.55 N
ATOM 21 C2 G B 47 0.107 43.337 -16.892 1.00 27.47 C
ATOM 22 N2 G B 47 0.716 44.522 -17.046 1.00 23.61 N
ATOM 23 N3 G B 47 0.254 42.399 -17.821 1.00 20.62 N
ATOM 24 C4 G B 47 -0.425 41.269 -17.516 1.00 25.27 C
ATOM 25 P A B 48 2.507 35.477 -19.860 1.00 32.64 P
ATOM 26 OP1 A B 48 3.943 35.154 -20.001 1.00 35.45 O
ATOM 27 OP2 A B 48 1.519 34.807 -20.735 1.00 31.08 O
ATOM 28 O5' A B 48 2.111 35.234 -18.332 1.00 26.53 O
TER
Atoms:
OP1: (2.788,47.768,-18.115)
OP2: (4.709,49.191,-19.034)
C3': (2.283,51.951,-15.312)
C1': (0.576,50.350,-14.996)
C5': (2.640,50.946,-17.652)
O6: (-1.332,44.858,-13.661)
O4': (0.613,50.623,-16.380)
C8: (0.721,47.935,-15.700)
C2: (-1.902,48.061,-12.199)
C6: (-1.256,46.080,-13.490)
C5: (-0.518,46.991,-14.267)
C4: (-0.543,48.326,-13.941)
P: (3.929,48.683,-17.883)
C4': (1.676,51.570,-16.661)
C2': (1.937,50.744,-14.440)
O2': (1.798,51.074,-13.074)
N1: (-1.938,46.708,-12.450)
N2: (-2.620,48.495,-11.151)
N3: (-1.206,48.929,-12.925)
N7: (0.280,46.753,-15.376)
N9: (0.267,48.933,-14.873)
O5': (3.386,49.916,-17.025)
O3': (1.662,53.131,-14.822)
OP2: (4.709,49.191,-19.034)
C3': (2.283,51.951,-15.312)
C1': (0.576,50.350,-14.996)
C5': (2.640,50.946,-17.652)
O6: (-1.332,44.858,-13.661)
O4': (0.613,50.623,-16.380)
C8: (0.721,47.935,-15.700)
C2: (-1.902,48.061,-12.199)
C6: (-1.256,46.080,-13.490)
C5: (-0.518,46.991,-14.267)
C4: (-0.543,48.326,-13.941)
P: (3.929,48.683,-17.883)
C4': (1.676,51.570,-16.661)
C2': (1.937,50.744,-14.440)
O2': (1.798,51.074,-13.074)
N1: (-1.938,46.708,-12.450)
N2: (-2.620,48.495,-11.151)
N3: (-1.206,48.929,-12.925)
N7: (0.280,46.753,-15.376)
N9: (0.267,48.933,-14.873)
O5': (3.386,49.916,-17.025)
O3': (1.662,53.131,-14.822)
OP1: (-2.376,34.258,-19.838)
OP2: (-3.042,35.398,-17.649)
C3': (1.226,37.765,-19.561)
C1': (0.174,39.882,-19.550)
C5': (-0.858,36.609,-20.545)
O6: (-1.999,41.932,-14.394)
O4': (-0.639,38.991,-20.291)
C8: (-1.274,39.241,-17.573)
C2: (0.107,43.337,-16.892)
C6: (-1.342,42.013,-15.432)
C5: (-1.195,41.011,-16.411)
C4: (-0.425,41.269,-17.516)
P: (-2.704,35.485,-19.084)
C4': (0.101,37.782,-20.586)
C2': (1.555,39.250,-19.453)
O2': (2.341,39.701,-20.537)
N1: (-0.644,43.177,-15.750)
N2: (0.716,44.522,-17.046)
N3: (0.254,42.399,-17.821)
N7: (-1.728,39.732,-16.453)
N9: (-0.475,40.116,-18.267)
O5': (-1.483,36.503,-19.271)
O3': (2.353,37.057,-20.057)
OP2: (-3.042,35.398,-17.649)
C3': (1.226,37.765,-19.561)
C1': (0.174,39.882,-19.550)
C5': (-0.858,36.609,-20.545)
O6: (-1.999,41.932,-14.394)
O4': (-0.639,38.991,-20.291)
C8: (-1.274,39.241,-17.573)
C2: (0.107,43.337,-16.892)
C6: (-1.342,42.013,-15.432)
C5: (-1.195,41.011,-16.411)
C4: (-0.425,41.269,-17.516)
P: (-2.704,35.485,-19.084)
C4': (0.101,37.782,-20.586)
C2': (1.555,39.250,-19.453)
O2': (2.341,39.701,-20.537)
N1: (-0.644,43.177,-15.750)
N2: (0.716,44.522,-17.046)
N3: (0.254,42.399,-17.821)
N7: (-1.728,39.732,-16.453)
N9: (-0.475,40.116,-18.267)
O5': (-1.483,36.503,-19.271)
O3': (2.353,37.057,-20.057)
Image (generated by PyMOL):