Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1D4R:A2:A1
Extra
PDB:
ATOM 1 O3' G A 1 24.353 -16.331 25.253 1.00 49.83 O
ATOM 2 P U A 2 23.671 -15.946 23.854 1.00 55.90 P
ATOM 3 OP1 U A 2 24.465 -16.580 22.772 1.00 56.76 O
ATOM 4 OP2 U A 2 23.422 -14.487 23.820 1.00 56.13 O
ATOM 5 O5' U A 2 22.272 -16.707 23.906 1.00 59.23 O
ATOM 6 C5' U A 2 22.222 -18.110 24.176 1.00 50.88 C
ATOM 7 C4' U A 2 20.788 -18.577 24.345 1.00 48.06 C
ATOM 8 O4' U A 2 20.243 -18.109 25.610 1.00 46.38 O
ATOM 9 C3' U A 2 19.766 -18.120 23.318 1.00 46.85 C
ATOM 10 O3' U A 2 19.807 -18.877 22.113 1.00 43.34 O
ATOM 11 C2' U A 2 18.466 -18.348 24.070 1.00 47.19 C
ATOM 12 O2' U A 2 18.110 -19.715 24.130 1.00 48.79 O
ATOM 13 C1' U A 2 18.849 -17.850 25.462 1.00 47.43 C
ATOM 14 N1 U A 2 18.596 -16.411 25.663 1.00 43.59 N
ATOM 15 C2 U A 2 17.291 -16.014 25.970 1.00 44.66 C
ATOM 16 O2 U A 2 16.349 -16.800 26.035 1.00 40.01 O
ATOM 17 N3 U A 2 17.132 -14.665 26.180 1.00 35.80 N
ATOM 18 C4 U A 2 18.107 -13.687 26.099 1.00 44.85 C
ATOM 19 O4 U A 2 17.810 -12.516 26.328 1.00 49.96 O
ATOM 20 C5 U A 2 19.417 -14.169 25.759 1.00 42.13 C
ATOM 21 C6 U A 2 19.610 -15.479 25.561 1.00 44.74 C
ATOM 22 P G A 3 19.441 -18.162 20.729 1.00 51.59 P
ATOM 23 OP1 G A 3 19.729 -19.101 19.619 1.00 49.00 O
ATOM 24 OP2 G A 3 20.047 -16.806 20.716 1.00 57.05 O
ATOM 25 O5' G A 3 17.852 -17.977 20.791 1.00 57.70 O
TER
ATOM 1 P G B 1 25.756 -11.816 27.330 1.00 54.85 P
ATOM 2 OP1 G B 1 26.760 -11.769 26.241 1.00 43.34 O
ATOM 3 OP2 G B 1 24.701 -10.759 27.410 1.00 49.94 O
ATOM 4 O5' G B 1 25.058 -13.249 27.286 1.00 42.76 O
ATOM 5 C5' G B 1 25.840 -14.429 27.379 1.00 46.60 C
ATOM 6 C4' G B 1 24.956 -15.635 27.498 1.00 48.00 C
ATOM 7 O4' G B 1 24.247 -15.596 28.767 1.00 51.58 O
ATOM 8 C3' G B 1 23.852 -15.776 26.462 1.00 47.28 C
ATOM 9 O3' G B 1 24.353 -16.331 25.253 1.00 49.83 O
ATOM 10 C2' G B 1 22.911 -16.722 27.183 1.00 46.75 C
ATOM 11 O2' G B 1 23.395 -18.055 27.186 1.00 45.78 O
ATOM 12 C1' G B 1 22.942 -16.127 28.593 1.00 47.71 C
ATOM 13 N9 G B 1 21.969 -15.051 28.805 1.00 48.80 N
ATOM 14 C8 G B 1 22.210 -13.698 28.808 1.00 53.87 C
ATOM 15 N7 G B 1 21.134 -12.984 29.011 1.00 56.48 N
ATOM 16 C5 G B 1 20.119 -13.920 29.154 1.00 51.05 C
ATOM 17 C6 G B 1 18.723 -13.739 29.394 1.00 53.16 C
ATOM 18 O6 G B 1 18.087 -12.680 29.524 1.00 53.00 O
ATOM 19 N1 G B 1 18.059 -14.952 29.472 1.00 41.10 N
ATOM 20 C2 G B 1 18.645 -16.181 29.320 1.00 49.58 C
ATOM 21 N2 G B 1 17.819 -17.213 29.393 1.00 32.07 N
ATOM 22 N3 G B 1 19.945 -16.373 29.102 1.00 35.64 N
ATOM 23 C4 G B 1 20.616 -15.202 29.031 1.00 51.78 C
ATOM 24 P U B 2 23.671 -15.946 23.854 1.00 55.90 P
ATOM 25 OP1 U B 2 24.465 -16.580 22.772 1.00 56.76 O
ATOM 26 OP2 U B 2 23.422 -14.487 23.820 1.00 56.13 O
ATOM 27 O5' U B 2 22.272 -16.707 23.906 1.00 59.23 O
TER
ATOM 2 P U A 2 23.671 -15.946 23.854 1.00 55.90 P
ATOM 3 OP1 U A 2 24.465 -16.580 22.772 1.00 56.76 O
ATOM 4 OP2 U A 2 23.422 -14.487 23.820 1.00 56.13 O
ATOM 5 O5' U A 2 22.272 -16.707 23.906 1.00 59.23 O
ATOM 6 C5' U A 2 22.222 -18.110 24.176 1.00 50.88 C
ATOM 7 C4' U A 2 20.788 -18.577 24.345 1.00 48.06 C
ATOM 8 O4' U A 2 20.243 -18.109 25.610 1.00 46.38 O
ATOM 9 C3' U A 2 19.766 -18.120 23.318 1.00 46.85 C
ATOM 10 O3' U A 2 19.807 -18.877 22.113 1.00 43.34 O
ATOM 11 C2' U A 2 18.466 -18.348 24.070 1.00 47.19 C
ATOM 12 O2' U A 2 18.110 -19.715 24.130 1.00 48.79 O
ATOM 13 C1' U A 2 18.849 -17.850 25.462 1.00 47.43 C
ATOM 14 N1 U A 2 18.596 -16.411 25.663 1.00 43.59 N
ATOM 15 C2 U A 2 17.291 -16.014 25.970 1.00 44.66 C
ATOM 16 O2 U A 2 16.349 -16.800 26.035 1.00 40.01 O
ATOM 17 N3 U A 2 17.132 -14.665 26.180 1.00 35.80 N
ATOM 18 C4 U A 2 18.107 -13.687 26.099 1.00 44.85 C
ATOM 19 O4 U A 2 17.810 -12.516 26.328 1.00 49.96 O
ATOM 20 C5 U A 2 19.417 -14.169 25.759 1.00 42.13 C
ATOM 21 C6 U A 2 19.610 -15.479 25.561 1.00 44.74 C
ATOM 22 P G A 3 19.441 -18.162 20.729 1.00 51.59 P
ATOM 23 OP1 G A 3 19.729 -19.101 19.619 1.00 49.00 O
ATOM 24 OP2 G A 3 20.047 -16.806 20.716 1.00 57.05 O
ATOM 25 O5' G A 3 17.852 -17.977 20.791 1.00 57.70 O
TER
ATOM 1 P G B 1 25.756 -11.816 27.330 1.00 54.85 P
ATOM 2 OP1 G B 1 26.760 -11.769 26.241 1.00 43.34 O
ATOM 3 OP2 G B 1 24.701 -10.759 27.410 1.00 49.94 O
ATOM 4 O5' G B 1 25.058 -13.249 27.286 1.00 42.76 O
ATOM 5 C5' G B 1 25.840 -14.429 27.379 1.00 46.60 C
ATOM 6 C4' G B 1 24.956 -15.635 27.498 1.00 48.00 C
ATOM 7 O4' G B 1 24.247 -15.596 28.767 1.00 51.58 O
ATOM 8 C3' G B 1 23.852 -15.776 26.462 1.00 47.28 C
ATOM 9 O3' G B 1 24.353 -16.331 25.253 1.00 49.83 O
ATOM 10 C2' G B 1 22.911 -16.722 27.183 1.00 46.75 C
ATOM 11 O2' G B 1 23.395 -18.055 27.186 1.00 45.78 O
ATOM 12 C1' G B 1 22.942 -16.127 28.593 1.00 47.71 C
ATOM 13 N9 G B 1 21.969 -15.051 28.805 1.00 48.80 N
ATOM 14 C8 G B 1 22.210 -13.698 28.808 1.00 53.87 C
ATOM 15 N7 G B 1 21.134 -12.984 29.011 1.00 56.48 N
ATOM 16 C5 G B 1 20.119 -13.920 29.154 1.00 51.05 C
ATOM 17 C6 G B 1 18.723 -13.739 29.394 1.00 53.16 C
ATOM 18 O6 G B 1 18.087 -12.680 29.524 1.00 53.00 O
ATOM 19 N1 G B 1 18.059 -14.952 29.472 1.00 41.10 N
ATOM 20 C2 G B 1 18.645 -16.181 29.320 1.00 49.58 C
ATOM 21 N2 G B 1 17.819 -17.213 29.393 1.00 32.07 N
ATOM 22 N3 G B 1 19.945 -16.373 29.102 1.00 35.64 N
ATOM 23 C4 G B 1 20.616 -15.202 29.031 1.00 51.78 C
ATOM 24 P U B 2 23.671 -15.946 23.854 1.00 55.90 P
ATOM 25 OP1 U B 2 24.465 -16.580 22.772 1.00 56.76 O
ATOM 26 OP2 U B 2 23.422 -14.487 23.820 1.00 56.13 O
ATOM 27 O5' U B 2 22.272 -16.707 23.906 1.00 59.23 O
TER
Atoms:
C4: (18.107,-13.687,26.099)
N3: (17.132,-14.665,26.180)
OP1: (24.465,-16.580,22.772)
OP2: (23.422,-14.487,23.820)
C2: (17.291,-16.014,25.970)
C1': (18.849,-17.850,25.462)
C3': (19.766,-18.120,23.318)
O5': (22.272,-16.707,23.906)
O4': (20.243,-18.109,25.610)
C5': (22.222,-18.110,24.176)
P: (23.671,-15.946,23.854)
C4': (20.788,-18.577,24.345)
C2': (18.466,-18.348,24.070)
O2': (18.110,-19.715,24.130)
N1: (18.596,-16.411,25.663)
O4: (17.810,-12.516,26.328)
O2: (16.349,-16.800,26.035)
C6: (19.610,-15.479,25.561)
C5: (19.417,-14.169,25.759)
O3': (19.807,-18.877,22.113)
N3: (17.132,-14.665,26.180)
OP1: (24.465,-16.580,22.772)
OP2: (23.422,-14.487,23.820)
C2: (17.291,-16.014,25.970)
C1': (18.849,-17.850,25.462)
C3': (19.766,-18.120,23.318)
O5': (22.272,-16.707,23.906)
O4': (20.243,-18.109,25.610)
C5': (22.222,-18.110,24.176)
P: (23.671,-15.946,23.854)
C4': (20.788,-18.577,24.345)
C2': (18.466,-18.348,24.070)
O2': (18.110,-19.715,24.130)
N1: (18.596,-16.411,25.663)
O4: (17.810,-12.516,26.328)
O2: (16.349,-16.800,26.035)
C6: (19.610,-15.479,25.561)
C5: (19.417,-14.169,25.759)
O3': (19.807,-18.877,22.113)
OP1: (26.760,-11.769,26.241)
OP2: (24.701,-10.759,27.410)
C3': (23.852,-15.776,26.462)
C1': (22.942,-16.127,28.593)
C5': (25.840,-14.429,27.379)
O6: (18.087,-12.680,29.524)
O4': (24.247,-15.596,28.767)
C8: (22.210,-13.698,28.808)
C2: (18.645,-16.181,29.320)
C6: (18.723,-13.739,29.394)
C5: (20.119,-13.920,29.154)
C4: (20.616,-15.202,29.031)
P: (25.756,-11.816,27.330)
C4': (24.956,-15.635,27.498)
C2': (22.911,-16.722,27.183)
O2': (23.395,-18.055,27.186)
N1: (18.059,-14.952,29.472)
N2: (17.819,-17.213,29.393)
N3: (19.945,-16.373,29.102)
N7: (21.134,-12.984,29.011)
N9: (21.969,-15.051,28.805)
O5': (25.058,-13.249,27.286)
O3': (24.353,-16.331,25.253)
OP2: (24.701,-10.759,27.410)
C3': (23.852,-15.776,26.462)
C1': (22.942,-16.127,28.593)
C5': (25.840,-14.429,27.379)
O6: (18.087,-12.680,29.524)
O4': (24.247,-15.596,28.767)
C8: (22.210,-13.698,28.808)
C2: (18.645,-16.181,29.320)
C6: (18.723,-13.739,29.394)
C5: (20.119,-13.920,29.154)
C4: (20.616,-15.202,29.031)
P: (25.756,-11.816,27.330)
C4': (24.956,-15.635,27.498)
C2': (22.911,-16.722,27.183)
O2': (23.395,-18.055,27.186)
N1: (18.059,-14.952,29.472)
N2: (17.819,-17.213,29.393)
N3: (19.945,-16.373,29.102)
N7: (21.134,-12.984,29.011)
N9: (21.969,-15.051,28.805)
O5': (25.058,-13.249,27.286)
O3': (24.353,-16.331,25.253)
Image (generated by PyMOL):