Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IBK:B8:B4
Extra
PDB:
ATOM 1 O3' G A 7 -3.589 15.521 35.018 1.00 38.18 O
ATOM 2 P G A 8 -4.527 16.084 33.863 1.00 35.37 P
ATOM 3 OP1 G A 8 -5.823 15.403 34.005 1.00 39.98 O
ATOM 4 OP2 G A 8 -3.788 16.037 32.587 1.00 33.76 O
ATOM 5 O5' G A 8 -4.698 17.597 34.255 1.00 33.16 O
ATOM 6 C5' G A 8 -5.159 17.939 35.527 1.00 30.89 C
ATOM 7 C4' G A 8 -5.005 19.421 35.712 1.00 32.11 C
ATOM 8 O4' G A 8 -3.610 19.733 35.860 1.00 29.59 O
ATOM 9 C3' G A 8 -5.445 20.239 34.510 1.00 32.29 C
ATOM 10 O3' G A 8 -6.838 20.478 34.585 1.00 35.24 O
ATOM 11 C2' G A 8 -4.657 21.524 34.703 1.00 31.12 C
ATOM 12 O2' G A 8 -5.285 22.393 35.621 1.00 32.59 O
ATOM 13 C1' G A 8 -3.346 21.004 35.296 1.00 29.54 C
ATOM 14 N9 G A 8 -2.282 20.854 34.325 1.00 26.71 N
ATOM 15 C8 G A 8 -1.985 19.734 33.565 1.00 27.15 C
ATOM 16 N7 G A 8 -0.940 19.898 32.785 1.00 27.76 N
ATOM 17 C5 G A 8 -0.511 21.198 33.072 1.00 25.99 C
ATOM 18 C6 G A 8 0.583 21.930 32.565 1.00 26.18 C
ATOM 19 O6 G A 8 1.423 21.567 31.731 1.00 26.62 O
ATOM 20 N1 G A 8 0.643 23.222 33.117 1.00 26.03 N
ATOM 21 C2 G A 8 -0.245 23.725 34.058 1.00 24.03 C
ATOM 22 N2 G A 8 -0.027 24.991 34.504 1.00 22.07 N
ATOM 23 N3 G A 8 -1.262 23.040 34.538 1.00 23.30 N
ATOM 24 C4 G A 8 -1.336 21.794 34.010 1.00 25.38 C
ATOM 25 P U A 9 -7.731 20.538 33.263 1.00 30.99 P
ATOM 26 OP1 U A 9 -9.129 20.302 33.674 1.00 34.49 O
ATOM 27 OP2 U A 9 -7.098 19.683 32.249 1.00 29.35 O
ATOM 28 O5' U A 9 -7.586 22.052 32.773 1.00 29.47 O
TER
ATOM 1 O3' G B 3 6.584 15.364 24.082 1.00 29.02 O
ATOM 2 P G B 4 5.633 16.214 23.111 1.00 26.82 P
ATOM 3 OP1 G B 4 5.854 15.728 21.732 1.00 30.53 O
ATOM 4 OP2 G B 4 5.795 17.653 23.416 1.00 30.72 O
ATOM 5 O5' G B 4 4.200 15.763 23.591 1.00 26.97 O
ATOM 6 C5' G B 4 3.978 14.412 23.962 1.00 29.07 C
ATOM 7 C4' G B 4 2.741 14.318 24.818 1.00 31.39 C
ATOM 8 O4' G B 4 3.009 14.923 26.115 1.00 31.40 O
ATOM 9 C3' G B 4 1.536 15.049 24.221 1.00 33.27 C
ATOM 10 O3' G B 4 0.414 14.194 24.166 1.00 37.82 O
ATOM 11 C2' G B 4 1.288 16.232 25.144 1.00 31.68 C
ATOM 12 O2' G B 4 -0.090 16.444 25.389 1.00 33.77 O
ATOM 13 C1' G B 4 2.009 15.858 26.445 1.00 29.19 C
ATOM 14 N9 G B 4 2.625 17.038 27.018 1.00 23.89 N
ATOM 15 C8 G B 4 3.646 17.763 26.468 1.00 23.11 C
ATOM 16 N7 G B 4 3.910 18.860 27.109 1.00 23.29 N
ATOM 17 C5 G B 4 2.969 18.887 28.123 1.00 20.85 C
ATOM 18 C6 G B 4 2.773 19.834 29.137 1.00 19.52 C
ATOM 19 O6 G B 4 3.424 20.874 29.348 1.00 19.06 O
ATOM 20 N1 G B 4 1.706 19.491 29.966 1.00 18.77 N
ATOM 21 C2 G B 4 0.949 18.356 29.843 1.00 16.56 C
ATOM 22 N2 G B 4 -0.024 18.182 30.757 1.00 13.39 N
ATOM 23 N3 G B 4 1.129 17.455 28.891 1.00 20.22 N
ATOM 24 C4 G B 4 2.154 17.787 28.067 1.00 21.66 C
ATOM 25 P U B 5 -0.366 13.996 22.786 1.00 36.59 P
ATOM 26 OP1 U B 5 -0.021 15.143 21.915 1.00 38.20 O
ATOM 27 OP2 U B 5 -1.771 13.718 23.125 1.00 38.93 O
ATOM 28 O5' U B 5 0.354 12.711 22.067 0.00 31.59 O
TER
ATOM 2 P G A 8 -4.527 16.084 33.863 1.00 35.37 P
ATOM 3 OP1 G A 8 -5.823 15.403 34.005 1.00 39.98 O
ATOM 4 OP2 G A 8 -3.788 16.037 32.587 1.00 33.76 O
ATOM 5 O5' G A 8 -4.698 17.597 34.255 1.00 33.16 O
ATOM 6 C5' G A 8 -5.159 17.939 35.527 1.00 30.89 C
ATOM 7 C4' G A 8 -5.005 19.421 35.712 1.00 32.11 C
ATOM 8 O4' G A 8 -3.610 19.733 35.860 1.00 29.59 O
ATOM 9 C3' G A 8 -5.445 20.239 34.510 1.00 32.29 C
ATOM 10 O3' G A 8 -6.838 20.478 34.585 1.00 35.24 O
ATOM 11 C2' G A 8 -4.657 21.524 34.703 1.00 31.12 C
ATOM 12 O2' G A 8 -5.285 22.393 35.621 1.00 32.59 O
ATOM 13 C1' G A 8 -3.346 21.004 35.296 1.00 29.54 C
ATOM 14 N9 G A 8 -2.282 20.854 34.325 1.00 26.71 N
ATOM 15 C8 G A 8 -1.985 19.734 33.565 1.00 27.15 C
ATOM 16 N7 G A 8 -0.940 19.898 32.785 1.00 27.76 N
ATOM 17 C5 G A 8 -0.511 21.198 33.072 1.00 25.99 C
ATOM 18 C6 G A 8 0.583 21.930 32.565 1.00 26.18 C
ATOM 19 O6 G A 8 1.423 21.567 31.731 1.00 26.62 O
ATOM 20 N1 G A 8 0.643 23.222 33.117 1.00 26.03 N
ATOM 21 C2 G A 8 -0.245 23.725 34.058 1.00 24.03 C
ATOM 22 N2 G A 8 -0.027 24.991 34.504 1.00 22.07 N
ATOM 23 N3 G A 8 -1.262 23.040 34.538 1.00 23.30 N
ATOM 24 C4 G A 8 -1.336 21.794 34.010 1.00 25.38 C
ATOM 25 P U A 9 -7.731 20.538 33.263 1.00 30.99 P
ATOM 26 OP1 U A 9 -9.129 20.302 33.674 1.00 34.49 O
ATOM 27 OP2 U A 9 -7.098 19.683 32.249 1.00 29.35 O
ATOM 28 O5' U A 9 -7.586 22.052 32.773 1.00 29.47 O
TER
ATOM 1 O3' G B 3 6.584 15.364 24.082 1.00 29.02 O
ATOM 2 P G B 4 5.633 16.214 23.111 1.00 26.82 P
ATOM 3 OP1 G B 4 5.854 15.728 21.732 1.00 30.53 O
ATOM 4 OP2 G B 4 5.795 17.653 23.416 1.00 30.72 O
ATOM 5 O5' G B 4 4.200 15.763 23.591 1.00 26.97 O
ATOM 6 C5' G B 4 3.978 14.412 23.962 1.00 29.07 C
ATOM 7 C4' G B 4 2.741 14.318 24.818 1.00 31.39 C
ATOM 8 O4' G B 4 3.009 14.923 26.115 1.00 31.40 O
ATOM 9 C3' G B 4 1.536 15.049 24.221 1.00 33.27 C
ATOM 10 O3' G B 4 0.414 14.194 24.166 1.00 37.82 O
ATOM 11 C2' G B 4 1.288 16.232 25.144 1.00 31.68 C
ATOM 12 O2' G B 4 -0.090 16.444 25.389 1.00 33.77 O
ATOM 13 C1' G B 4 2.009 15.858 26.445 1.00 29.19 C
ATOM 14 N9 G B 4 2.625 17.038 27.018 1.00 23.89 N
ATOM 15 C8 G B 4 3.646 17.763 26.468 1.00 23.11 C
ATOM 16 N7 G B 4 3.910 18.860 27.109 1.00 23.29 N
ATOM 17 C5 G B 4 2.969 18.887 28.123 1.00 20.85 C
ATOM 18 C6 G B 4 2.773 19.834 29.137 1.00 19.52 C
ATOM 19 O6 G B 4 3.424 20.874 29.348 1.00 19.06 O
ATOM 20 N1 G B 4 1.706 19.491 29.966 1.00 18.77 N
ATOM 21 C2 G B 4 0.949 18.356 29.843 1.00 16.56 C
ATOM 22 N2 G B 4 -0.024 18.182 30.757 1.00 13.39 N
ATOM 23 N3 G B 4 1.129 17.455 28.891 1.00 20.22 N
ATOM 24 C4 G B 4 2.154 17.787 28.067 1.00 21.66 C
ATOM 25 P U B 5 -0.366 13.996 22.786 1.00 36.59 P
ATOM 26 OP1 U B 5 -0.021 15.143 21.915 1.00 38.20 O
ATOM 27 OP2 U B 5 -1.771 13.718 23.125 1.00 38.93 O
ATOM 28 O5' U B 5 0.354 12.711 22.067 0.00 31.59 O
TER
Atoms:
OP1: (-5.823,15.403,34.005)
OP2: (-3.788,16.037,32.587)
C3': (-5.445,20.239,34.510)
C1': (-3.346,21.004,35.296)
C5': (-5.159,17.939,35.527)
O6: (1.423,21.567,31.731)
O4': (-3.610,19.733,35.860)
C8: (-1.985,19.734,33.565)
C2: (-0.245,23.725,34.058)
C6: (0.583,21.930,32.565)
C5: (-0.511,21.198,33.072)
C4: (-1.336,21.794,34.010)
P: (-4.527,16.084,33.863)
C4': (-5.005,19.421,35.712)
C2': (-4.657,21.524,34.703)
O2': (-5.285,22.393,35.621)
N1: (0.643,23.222,33.117)
N2: (-0.027,24.991,34.504)
N3: (-1.262,23.040,34.538)
N7: (-0.940,19.898,32.785)
N9: (-2.282,20.854,34.325)
O5': (-4.698,17.597,34.255)
O3': (-6.838,20.478,34.585)
OP2: (-3.788,16.037,32.587)
C3': (-5.445,20.239,34.510)
C1': (-3.346,21.004,35.296)
C5': (-5.159,17.939,35.527)
O6: (1.423,21.567,31.731)
O4': (-3.610,19.733,35.860)
C8: (-1.985,19.734,33.565)
C2: (-0.245,23.725,34.058)
C6: (0.583,21.930,32.565)
C5: (-0.511,21.198,33.072)
C4: (-1.336,21.794,34.010)
P: (-4.527,16.084,33.863)
C4': (-5.005,19.421,35.712)
C2': (-4.657,21.524,34.703)
O2': (-5.285,22.393,35.621)
N1: (0.643,23.222,33.117)
N2: (-0.027,24.991,34.504)
N3: (-1.262,23.040,34.538)
N7: (-0.940,19.898,32.785)
N9: (-2.282,20.854,34.325)
O5': (-4.698,17.597,34.255)
O3': (-6.838,20.478,34.585)
OP1: (5.854,15.728,21.732)
OP2: (5.795,17.653,23.416)
C3': (1.536,15.049,24.221)
C1': (2.009,15.858,26.445)
C5': (3.978,14.412,23.962)
O6: (3.424,20.874,29.348)
O4': (3.009,14.923,26.115)
C8: (3.646,17.763,26.468)
C2: (0.949,18.356,29.843)
C6: (2.773,19.834,29.137)
C5: (2.969,18.887,28.123)
C4: (2.154,17.787,28.067)
P: (5.633,16.214,23.111)
C4': (2.741,14.318,24.818)
C2': (1.288,16.232,25.144)
O2': (-0.090,16.444,25.389)
N1: (1.706,19.491,29.966)
N2: (-0.024,18.182,30.757)
N3: (1.129,17.455,28.891)
N7: (3.910,18.860,27.109)
N9: (2.625,17.038,27.018)
O5': (4.200,15.763,23.591)
O3': (0.414,14.194,24.166)
OP2: (5.795,17.653,23.416)
C3': (1.536,15.049,24.221)
C1': (2.009,15.858,26.445)
C5': (3.978,14.412,23.962)
O6: (3.424,20.874,29.348)
O4': (3.009,14.923,26.115)
C8: (3.646,17.763,26.468)
C2: (0.949,18.356,29.843)
C6: (2.773,19.834,29.137)
C5: (2.969,18.887,28.123)
C4: (2.154,17.787,28.067)
P: (5.633,16.214,23.111)
C4': (2.741,14.318,24.818)
C2': (1.288,16.232,25.144)
O2': (-0.090,16.444,25.389)
N1: (1.706,19.491,29.966)
N2: (-0.024,18.182,30.757)
N3: (1.129,17.455,28.891)
N7: (3.910,18.860,27.109)
N9: (2.625,17.038,27.018)
O5': (4.200,15.763,23.591)
O3': (0.414,14.194,24.166)
Image (generated by PyMOL):