Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3L0U:A9:A43
Extra
PDB:
ATOM 1 O3' A A 8 5.261 -25.703 3.335 1.00 71.95 O
ATOM 2 P G A 9 4.489 -24.548 2.556 1.00 73.18 P
ATOM 3 OP1 G A 9 3.162 -25.076 2.160 1.00 74.34 O
ATOM 4 OP2 G A 9 5.406 -23.997 1.532 1.00 73.21 O
ATOM 5 O5' G A 9 4.288 -23.442 3.694 1.00 72.73 O
ATOM 6 C5' G A 9 3.478 -22.298 3.453 1.00 73.59 C
ATOM 7 C4' G A 9 2.790 -21.854 4.726 1.00 73.56 C
ATOM 8 O4' G A 9 1.913 -22.908 5.194 1.00 73.96 O
ATOM 9 C3' G A 9 3.722 -21.569 5.889 1.00 72.76 C
ATOM 10 O3' G A 9 4.181 -20.217 5.845 1.00 72.90 O
ATOM 11 C2' G A 9 2.838 -21.856 7.092 1.00 73.02 C
ATOM 12 O2' G A 9 1.988 -20.779 7.436 1.00 73.82 O
ATOM 13 C1' G A 9 2.030 -23.054 6.601 1.00 73.53 C
ATOM 14 N9 G A 9 2.640 -24.356 6.887 1.00 73.21 N
ATOM 15 C8 G A 9 2.883 -25.374 5.990 1.00 73.57 C
ATOM 16 N7 G A 9 3.428 -26.428 6.531 1.00 73.19 N
ATOM 17 C5 G A 9 3.555 -26.096 7.872 1.00 72.86 C
ATOM 18 C6 G A 9 4.084 -26.846 8.952 1.00 72.79 C
ATOM 19 O6 G A 9 4.555 -27.991 8.930 1.00 73.20 O
ATOM 20 N1 G A 9 4.025 -26.141 10.154 1.00 72.58 N
ATOM 21 C2 G A 9 3.521 -24.868 10.294 1.00 72.70 C
ATOM 22 N2 G A 9 3.549 -24.348 11.529 1.00 72.84 N
ATOM 23 N3 G A 9 3.021 -24.153 9.290 1.00 72.82 N
ATOM 24 C4 G A 9 3.070 -24.825 8.111 1.00 72.81 C
ATOM 25 P C A 10 5.733 -19.882 6.017 1.00 71.77 P
ATOM 26 OP1 C A 10 5.951 -18.487 5.584 1.00 72.23 O
ATOM 27 OP2 C A 10 6.515 -20.974 5.404 1.00 71.59 O
ATOM 28 O5' C A 10 5.933 -19.970 7.591 1.00 71.68 O
TER
ATOM 1 O3' C B 42 2.788 -39.635 3.508 1.00 85.29 O
ATOM 2 P G B 43 4.054 -38.716 3.162 1.00 84.52 P
ATOM 3 OP1 G B 43 4.444 -38.988 1.759 1.00 86.05 O
ATOM 4 OP2 G B 43 5.051 -38.878 4.244 1.00 84.20 O
ATOM 5 O5' G B 43 3.453 -37.234 3.238 1.00 82.32 O
ATOM 6 C5' G B 43 2.664 -36.712 2.168 1.00 82.53 C
ATOM 7 C4' G B 43 3.239 -35.400 1.674 1.00 81.24 C
ATOM 8 O4' G B 43 3.321 -34.489 2.783 1.00 78.69 O
ATOM 9 C3' G B 43 4.659 -35.497 1.101 1.00 81.94 C
ATOM 10 O3' G B 43 4.671 -35.510 -0.360 1.00 84.09 O
ATOM 11 C2' G B 43 5.418 -34.293 1.686 1.00 79.59 C
ATOM 12 O2' G B 43 5.869 -33.386 0.698 1.00 79.64 O
ATOM 13 C1' G B 43 4.411 -33.616 2.620 1.00 77.80 C
ATOM 14 N9 G B 43 4.929 -33.327 3.954 1.00 76.18 N
ATOM 15 C8 G B 43 5.614 -34.187 4.779 1.00 76.49 C
ATOM 16 N7 G B 43 5.933 -33.664 5.928 1.00 75.12 N
ATOM 17 C5 G B 43 5.422 -32.378 5.866 1.00 73.98 C
ATOM 18 C6 G B 43 5.451 -31.346 6.826 1.00 72.77 C
ATOM 19 O6 G B 43 5.966 -31.369 7.949 1.00 73.14 O
ATOM 20 N1 G B 43 4.814 -30.193 6.377 1.00 71.91 N
ATOM 21 C2 G B 43 4.211 -30.060 5.150 1.00 72.57 C
ATOM 22 N2 G B 43 3.645 -28.874 4.893 1.00 72.33 N
ATOM 23 N3 G B 43 4.166 -31.026 4.238 1.00 73.93 N
ATOM 24 C4 G B 43 4.795 -32.153 4.661 1.00 74.52 C
ATOM 25 P U B 44 3.584 -34.715 -1.245 1.00 84.80 P
ATOM 26 OP1 U B 44 3.298 -33.423 -0.580 1.00 82.54 O
ATOM 27 OP2 U B 44 2.477 -35.655 -1.550 1.00 86.09 O
ATOM 28 O5' U B 44 4.388 -34.421 -2.604 1.00 86.11 O
TER
ATOM 2 P G A 9 4.489 -24.548 2.556 1.00 73.18 P
ATOM 3 OP1 G A 9 3.162 -25.076 2.160 1.00 74.34 O
ATOM 4 OP2 G A 9 5.406 -23.997 1.532 1.00 73.21 O
ATOM 5 O5' G A 9 4.288 -23.442 3.694 1.00 72.73 O
ATOM 6 C5' G A 9 3.478 -22.298 3.453 1.00 73.59 C
ATOM 7 C4' G A 9 2.790 -21.854 4.726 1.00 73.56 C
ATOM 8 O4' G A 9 1.913 -22.908 5.194 1.00 73.96 O
ATOM 9 C3' G A 9 3.722 -21.569 5.889 1.00 72.76 C
ATOM 10 O3' G A 9 4.181 -20.217 5.845 1.00 72.90 O
ATOM 11 C2' G A 9 2.838 -21.856 7.092 1.00 73.02 C
ATOM 12 O2' G A 9 1.988 -20.779 7.436 1.00 73.82 O
ATOM 13 C1' G A 9 2.030 -23.054 6.601 1.00 73.53 C
ATOM 14 N9 G A 9 2.640 -24.356 6.887 1.00 73.21 N
ATOM 15 C8 G A 9 2.883 -25.374 5.990 1.00 73.57 C
ATOM 16 N7 G A 9 3.428 -26.428 6.531 1.00 73.19 N
ATOM 17 C5 G A 9 3.555 -26.096 7.872 1.00 72.86 C
ATOM 18 C6 G A 9 4.084 -26.846 8.952 1.00 72.79 C
ATOM 19 O6 G A 9 4.555 -27.991 8.930 1.00 73.20 O
ATOM 20 N1 G A 9 4.025 -26.141 10.154 1.00 72.58 N
ATOM 21 C2 G A 9 3.521 -24.868 10.294 1.00 72.70 C
ATOM 22 N2 G A 9 3.549 -24.348 11.529 1.00 72.84 N
ATOM 23 N3 G A 9 3.021 -24.153 9.290 1.00 72.82 N
ATOM 24 C4 G A 9 3.070 -24.825 8.111 1.00 72.81 C
ATOM 25 P C A 10 5.733 -19.882 6.017 1.00 71.77 P
ATOM 26 OP1 C A 10 5.951 -18.487 5.584 1.00 72.23 O
ATOM 27 OP2 C A 10 6.515 -20.974 5.404 1.00 71.59 O
ATOM 28 O5' C A 10 5.933 -19.970 7.591 1.00 71.68 O
TER
ATOM 1 O3' C B 42 2.788 -39.635 3.508 1.00 85.29 O
ATOM 2 P G B 43 4.054 -38.716 3.162 1.00 84.52 P
ATOM 3 OP1 G B 43 4.444 -38.988 1.759 1.00 86.05 O
ATOM 4 OP2 G B 43 5.051 -38.878 4.244 1.00 84.20 O
ATOM 5 O5' G B 43 3.453 -37.234 3.238 1.00 82.32 O
ATOM 6 C5' G B 43 2.664 -36.712 2.168 1.00 82.53 C
ATOM 7 C4' G B 43 3.239 -35.400 1.674 1.00 81.24 C
ATOM 8 O4' G B 43 3.321 -34.489 2.783 1.00 78.69 O
ATOM 9 C3' G B 43 4.659 -35.497 1.101 1.00 81.94 C
ATOM 10 O3' G B 43 4.671 -35.510 -0.360 1.00 84.09 O
ATOM 11 C2' G B 43 5.418 -34.293 1.686 1.00 79.59 C
ATOM 12 O2' G B 43 5.869 -33.386 0.698 1.00 79.64 O
ATOM 13 C1' G B 43 4.411 -33.616 2.620 1.00 77.80 C
ATOM 14 N9 G B 43 4.929 -33.327 3.954 1.00 76.18 N
ATOM 15 C8 G B 43 5.614 -34.187 4.779 1.00 76.49 C
ATOM 16 N7 G B 43 5.933 -33.664 5.928 1.00 75.12 N
ATOM 17 C5 G B 43 5.422 -32.378 5.866 1.00 73.98 C
ATOM 18 C6 G B 43 5.451 -31.346 6.826 1.00 72.77 C
ATOM 19 O6 G B 43 5.966 -31.369 7.949 1.00 73.14 O
ATOM 20 N1 G B 43 4.814 -30.193 6.377 1.00 71.91 N
ATOM 21 C2 G B 43 4.211 -30.060 5.150 1.00 72.57 C
ATOM 22 N2 G B 43 3.645 -28.874 4.893 1.00 72.33 N
ATOM 23 N3 G B 43 4.166 -31.026 4.238 1.00 73.93 N
ATOM 24 C4 G B 43 4.795 -32.153 4.661 1.00 74.52 C
ATOM 25 P U B 44 3.584 -34.715 -1.245 1.00 84.80 P
ATOM 26 OP1 U B 44 3.298 -33.423 -0.580 1.00 82.54 O
ATOM 27 OP2 U B 44 2.477 -35.655 -1.550 1.00 86.09 O
ATOM 28 O5' U B 44 4.388 -34.421 -2.604 1.00 86.11 O
TER
Atoms:
OP1: (3.162,-25.076,2.160)
OP2: (5.406,-23.997,1.532)
C3': (3.722,-21.569,5.889)
C1': (2.030,-23.054,6.601)
C5': (3.478,-22.298,3.453)
O6: (4.555,-27.991,8.930)
O4': (1.913,-22.908,5.194)
C8: (2.883,-25.374,5.990)
C2: (3.521,-24.868,10.294)
C6: (4.084,-26.846,8.952)
C5: (3.555,-26.096,7.872)
C4: (3.070,-24.825,8.111)
P: (4.489,-24.548,2.556)
C4': (2.790,-21.854,4.726)
C2': (2.838,-21.856,7.092)
O2': (1.988,-20.779,7.436)
N1: (4.025,-26.141,10.154)
N2: (3.549,-24.348,11.529)
N3: (3.021,-24.153,9.290)
N7: (3.428,-26.428,6.531)
N9: (2.640,-24.356,6.887)
O5': (4.288,-23.442,3.694)
O3': (4.181,-20.217,5.845)
OP2: (5.406,-23.997,1.532)
C3': (3.722,-21.569,5.889)
C1': (2.030,-23.054,6.601)
C5': (3.478,-22.298,3.453)
O6: (4.555,-27.991,8.930)
O4': (1.913,-22.908,5.194)
C8: (2.883,-25.374,5.990)
C2: (3.521,-24.868,10.294)
C6: (4.084,-26.846,8.952)
C5: (3.555,-26.096,7.872)
C4: (3.070,-24.825,8.111)
P: (4.489,-24.548,2.556)
C4': (2.790,-21.854,4.726)
C2': (2.838,-21.856,7.092)
O2': (1.988,-20.779,7.436)
N1: (4.025,-26.141,10.154)
N2: (3.549,-24.348,11.529)
N3: (3.021,-24.153,9.290)
N7: (3.428,-26.428,6.531)
N9: (2.640,-24.356,6.887)
O5': (4.288,-23.442,3.694)
O3': (4.181,-20.217,5.845)
OP1: (4.444,-38.988,1.759)
OP2: (5.051,-38.878,4.244)
C3': (4.659,-35.497,1.101)
C1': (4.411,-33.616,2.620)
C5': (2.664,-36.712,2.168)
O6: (5.966,-31.369,7.949)
O4': (3.321,-34.489,2.783)
C8: (5.614,-34.187,4.779)
C2: (4.211,-30.060,5.150)
C6: (5.451,-31.346,6.826)
C5: (5.422,-32.378,5.866)
C4: (4.795,-32.153,4.661)
P: (4.054,-38.716,3.162)
C4': (3.239,-35.400,1.674)
C2': (5.418,-34.293,1.686)
O2': (5.869,-33.386,0.698)
N1: (4.814,-30.193,6.377)
N2: (3.645,-28.874,4.893)
N3: (4.166,-31.026,4.238)
N7: (5.933,-33.664,5.928)
N9: (4.929,-33.327,3.954)
O5': (3.453,-37.234,3.238)
O3': (4.671,-35.510,-0.360)
OP2: (5.051,-38.878,4.244)
C3': (4.659,-35.497,1.101)
C1': (4.411,-33.616,2.620)
C5': (2.664,-36.712,2.168)
O6: (5.966,-31.369,7.949)
O4': (3.321,-34.489,2.783)
C8: (5.614,-34.187,4.779)
C2: (4.211,-30.060,5.150)
C6: (5.451,-31.346,6.826)
C5: (5.422,-32.378,5.866)
C4: (4.795,-32.153,4.661)
P: (4.054,-38.716,3.162)
C4': (3.239,-35.400,1.674)
C2': (5.418,-34.293,1.686)
O2': (5.869,-33.386,0.698)
N1: (4.814,-30.193,6.377)
N2: (3.645,-28.874,4.893)
N3: (4.166,-31.026,4.238)
N7: (5.933,-33.664,5.928)
N9: (4.929,-33.327,3.954)
O5': (3.453,-37.234,3.238)
O3': (4.671,-35.510,-0.360)
Image (generated by PyMOL):