Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3MIJ:A10:A4
Extra
PDB:
ATOM 1 O3' G A 9 17.468 -36.106 -7.242 1.00 20.16 O
ATOM 2 P G A 10 15.897 -35.926 -7.174 1.00 19.82 P
ATOM 3 OP1 G A 10 15.324 -36.914 -8.120 1.00 19.93 O
ATOM 4 OP2 G A 10 15.549 -34.490 -7.305 1.00 18.89 O
ATOM 5 O5' G A 10 15.584 -36.325 -5.660 1.00 20.00 O
ATOM 6 C5' G A 10 15.806 -37.636 -5.169 1.00 20.56 C
ATOM 7 C4' G A 10 15.469 -37.670 -3.693 1.00 21.60 C
ATOM 8 O4' G A 10 16.514 -36.992 -2.943 1.00 21.19 O
ATOM 9 C3' G A 10 14.208 -36.910 -3.311 1.00 22.63 C
ATOM 10 O3' G A 10 13.026 -37.678 -3.561 1.00 24.04 O
ATOM 11 C2' G A 10 14.455 -36.661 -1.826 1.00 22.40 C
ATOM 12 O2' G A 10 14.206 -37.797 -1.017 1.00 22.86 O
ATOM 13 C1' G A 10 15.942 -36.314 -1.833 1.00 21.22 C
ATOM 14 N9 G A 10 16.174 -34.879 -1.976 1.00 20.52 N
ATOM 15 C8 G A 10 16.254 -34.165 -3.142 1.00 20.30 C
ATOM 16 N7 G A 10 16.450 -32.886 -2.956 1.00 19.99 N
ATOM 17 C5 G A 10 16.496 -32.740 -1.585 1.00 19.36 C
ATOM 18 C6 G A 10 16.677 -31.578 -0.799 1.00 19.73 C
ATOM 19 O6 G A 10 16.857 -30.402 -1.179 1.00 20.02 O
ATOM 20 N1 G A 10 16.655 -31.862 0.565 1.00 18.79 N
ATOM 21 C2 G A 10 16.473 -33.118 1.100 1.00 18.93 C
ATOM 22 N2 G A 10 16.477 -33.205 2.439 1.00 17.21 N
ATOM 23 N3 G A 10 16.301 -34.219 0.368 1.00 19.57 N
ATOM 24 C4 G A 10 16.324 -33.955 -0.962 1.00 19.81 C
ATOM 25 P U A 11 11.610 -36.942 -3.751 1.00 25.89 P
ATOM 26 OP1 U A 11 10.738 -37.840 -4.527 1.00 26.23 O
ATOM 27 OP2 U A 11 11.838 -35.569 -4.250 1.00 26.14 O
ATOM 28 O5' U A 11 11.076 -36.861 -2.240 1.00 27.89 O
TER
ATOM 1 O3' G B 3 18.107 -21.107 -8.060 1.00 18.90 O
ATOM 2 P G B 4 16.558 -21.451 -8.131 1.00 19.53 P
ATOM 3 OP1 G B 4 16.004 -20.796 -9.328 1.00 20.75 O
ATOM 4 OP2 G B 4 15.956 -21.185 -6.803 1.00 18.72 O
ATOM 5 O5' G B 4 16.569 -23.017 -8.381 1.00 19.43 O
ATOM 6 C5' G B 4 16.790 -23.549 -9.682 1.00 20.88 C
ATOM 7 C4' G B 4 16.433 -25.025 -9.686 1.00 21.33 C
ATOM 8 O4' G B 4 16.994 -25.628 -8.488 1.00 21.41 O
ATOM 9 C3' G B 4 14.926 -25.307 -9.617 1.00 21.63 C
ATOM 10 O3' G B 4 14.609 -26.527 -10.240 1.00 21.73 O
ATOM 11 C2' G B 4 14.695 -25.418 -8.131 1.00 21.75 C
ATOM 12 O2' G B 4 13.550 -26.176 -7.817 1.00 23.29 O
ATOM 13 C1' G B 4 15.943 -26.184 -7.729 1.00 21.57 C
ATOM 14 N9 G B 4 16.191 -26.095 -6.294 1.00 21.45 N
ATOM 15 C8 G B 4 16.227 -24.962 -5.518 1.00 21.43 C
ATOM 16 N7 G B 4 16.391 -25.212 -4.250 1.00 21.47 N
ATOM 17 C5 G B 4 16.450 -26.594 -4.182 1.00 21.27 C
ATOM 18 C6 G B 4 16.610 -27.445 -3.068 1.00 21.60 C
ATOM 19 O6 G B 4 16.755 -27.133 -1.872 1.00 22.27 O
ATOM 20 N1 G B 4 16.604 -28.790 -3.433 1.00 21.04 N
ATOM 21 C2 G B 4 16.456 -29.246 -4.723 1.00 21.13 C
ATOM 22 N2 G B 4 16.469 -30.573 -4.900 1.00 20.87 N
ATOM 23 N3 G B 4 16.303 -28.456 -5.771 1.00 20.88 N
ATOM 24 C4 G B 4 16.311 -27.149 -5.427 1.00 21.11 C
ATOM 25 P U B 5 14.006 -26.536 -11.706 1.00 22.10 P
ATOM 26 OP1 U B 5 13.566 -25.161 -12.042 1.00 21.76 O
ATOM 27 OP2 U B 5 13.056 -27.661 -11.797 1.00 22.66 O
ATOM 28 O5' U B 5 15.291 -26.908 -12.564 1.00 22.91 O
TER
ATOM 2 P G A 10 15.897 -35.926 -7.174 1.00 19.82 P
ATOM 3 OP1 G A 10 15.324 -36.914 -8.120 1.00 19.93 O
ATOM 4 OP2 G A 10 15.549 -34.490 -7.305 1.00 18.89 O
ATOM 5 O5' G A 10 15.584 -36.325 -5.660 1.00 20.00 O
ATOM 6 C5' G A 10 15.806 -37.636 -5.169 1.00 20.56 C
ATOM 7 C4' G A 10 15.469 -37.670 -3.693 1.00 21.60 C
ATOM 8 O4' G A 10 16.514 -36.992 -2.943 1.00 21.19 O
ATOM 9 C3' G A 10 14.208 -36.910 -3.311 1.00 22.63 C
ATOM 10 O3' G A 10 13.026 -37.678 -3.561 1.00 24.04 O
ATOM 11 C2' G A 10 14.455 -36.661 -1.826 1.00 22.40 C
ATOM 12 O2' G A 10 14.206 -37.797 -1.017 1.00 22.86 O
ATOM 13 C1' G A 10 15.942 -36.314 -1.833 1.00 21.22 C
ATOM 14 N9 G A 10 16.174 -34.879 -1.976 1.00 20.52 N
ATOM 15 C8 G A 10 16.254 -34.165 -3.142 1.00 20.30 C
ATOM 16 N7 G A 10 16.450 -32.886 -2.956 1.00 19.99 N
ATOM 17 C5 G A 10 16.496 -32.740 -1.585 1.00 19.36 C
ATOM 18 C6 G A 10 16.677 -31.578 -0.799 1.00 19.73 C
ATOM 19 O6 G A 10 16.857 -30.402 -1.179 1.00 20.02 O
ATOM 20 N1 G A 10 16.655 -31.862 0.565 1.00 18.79 N
ATOM 21 C2 G A 10 16.473 -33.118 1.100 1.00 18.93 C
ATOM 22 N2 G A 10 16.477 -33.205 2.439 1.00 17.21 N
ATOM 23 N3 G A 10 16.301 -34.219 0.368 1.00 19.57 N
ATOM 24 C4 G A 10 16.324 -33.955 -0.962 1.00 19.81 C
ATOM 25 P U A 11 11.610 -36.942 -3.751 1.00 25.89 P
ATOM 26 OP1 U A 11 10.738 -37.840 -4.527 1.00 26.23 O
ATOM 27 OP2 U A 11 11.838 -35.569 -4.250 1.00 26.14 O
ATOM 28 O5' U A 11 11.076 -36.861 -2.240 1.00 27.89 O
TER
ATOM 1 O3' G B 3 18.107 -21.107 -8.060 1.00 18.90 O
ATOM 2 P G B 4 16.558 -21.451 -8.131 1.00 19.53 P
ATOM 3 OP1 G B 4 16.004 -20.796 -9.328 1.00 20.75 O
ATOM 4 OP2 G B 4 15.956 -21.185 -6.803 1.00 18.72 O
ATOM 5 O5' G B 4 16.569 -23.017 -8.381 1.00 19.43 O
ATOM 6 C5' G B 4 16.790 -23.549 -9.682 1.00 20.88 C
ATOM 7 C4' G B 4 16.433 -25.025 -9.686 1.00 21.33 C
ATOM 8 O4' G B 4 16.994 -25.628 -8.488 1.00 21.41 O
ATOM 9 C3' G B 4 14.926 -25.307 -9.617 1.00 21.63 C
ATOM 10 O3' G B 4 14.609 -26.527 -10.240 1.00 21.73 O
ATOM 11 C2' G B 4 14.695 -25.418 -8.131 1.00 21.75 C
ATOM 12 O2' G B 4 13.550 -26.176 -7.817 1.00 23.29 O
ATOM 13 C1' G B 4 15.943 -26.184 -7.729 1.00 21.57 C
ATOM 14 N9 G B 4 16.191 -26.095 -6.294 1.00 21.45 N
ATOM 15 C8 G B 4 16.227 -24.962 -5.518 1.00 21.43 C
ATOM 16 N7 G B 4 16.391 -25.212 -4.250 1.00 21.47 N
ATOM 17 C5 G B 4 16.450 -26.594 -4.182 1.00 21.27 C
ATOM 18 C6 G B 4 16.610 -27.445 -3.068 1.00 21.60 C
ATOM 19 O6 G B 4 16.755 -27.133 -1.872 1.00 22.27 O
ATOM 20 N1 G B 4 16.604 -28.790 -3.433 1.00 21.04 N
ATOM 21 C2 G B 4 16.456 -29.246 -4.723 1.00 21.13 C
ATOM 22 N2 G B 4 16.469 -30.573 -4.900 1.00 20.87 N
ATOM 23 N3 G B 4 16.303 -28.456 -5.771 1.00 20.88 N
ATOM 24 C4 G B 4 16.311 -27.149 -5.427 1.00 21.11 C
ATOM 25 P U B 5 14.006 -26.536 -11.706 1.00 22.10 P
ATOM 26 OP1 U B 5 13.566 -25.161 -12.042 1.00 21.76 O
ATOM 27 OP2 U B 5 13.056 -27.661 -11.797 1.00 22.66 O
ATOM 28 O5' U B 5 15.291 -26.908 -12.564 1.00 22.91 O
TER
Atoms:
OP1: (15.324,-36.914,-8.120)
OP2: (15.549,-34.490,-7.305)
C3': (14.208,-36.910,-3.311)
C1': (15.942,-36.314,-1.833)
C5': (15.806,-37.636,-5.169)
O6: (16.857,-30.402,-1.179)
O4': (16.514,-36.992,-2.943)
C8: (16.254,-34.165,-3.142)
C2: (16.473,-33.118,1.100)
C6: (16.677,-31.578,-0.799)
C5: (16.496,-32.740,-1.585)
C4: (16.324,-33.955,-0.962)
P: (15.897,-35.926,-7.174)
C4': (15.469,-37.670,-3.693)
C2': (14.455,-36.661,-1.826)
O2': (14.206,-37.797,-1.017)
N1: (16.655,-31.862,0.565)
N2: (16.477,-33.205,2.439)
N3: (16.301,-34.219,0.368)
N7: (16.450,-32.886,-2.956)
N9: (16.174,-34.879,-1.976)
O5': (15.584,-36.325,-5.660)
O3': (13.026,-37.678,-3.561)
OP2: (15.549,-34.490,-7.305)
C3': (14.208,-36.910,-3.311)
C1': (15.942,-36.314,-1.833)
C5': (15.806,-37.636,-5.169)
O6: (16.857,-30.402,-1.179)
O4': (16.514,-36.992,-2.943)
C8: (16.254,-34.165,-3.142)
C2: (16.473,-33.118,1.100)
C6: (16.677,-31.578,-0.799)
C5: (16.496,-32.740,-1.585)
C4: (16.324,-33.955,-0.962)
P: (15.897,-35.926,-7.174)
C4': (15.469,-37.670,-3.693)
C2': (14.455,-36.661,-1.826)
O2': (14.206,-37.797,-1.017)
N1: (16.655,-31.862,0.565)
N2: (16.477,-33.205,2.439)
N3: (16.301,-34.219,0.368)
N7: (16.450,-32.886,-2.956)
N9: (16.174,-34.879,-1.976)
O5': (15.584,-36.325,-5.660)
O3': (13.026,-37.678,-3.561)
OP1: (16.004,-20.796,-9.328)
OP2: (15.956,-21.185,-6.803)
C3': (14.926,-25.307,-9.617)
C1': (15.943,-26.184,-7.729)
C5': (16.790,-23.549,-9.682)
O6: (16.755,-27.133,-1.872)
O4': (16.994,-25.628,-8.488)
C8: (16.227,-24.962,-5.518)
C2: (16.456,-29.246,-4.723)
C6: (16.610,-27.445,-3.068)
C5: (16.450,-26.594,-4.182)
C4: (16.311,-27.149,-5.427)
P: (16.558,-21.451,-8.131)
C4': (16.433,-25.025,-9.686)
C2': (14.695,-25.418,-8.131)
O2': (13.550,-26.176,-7.817)
N1: (16.604,-28.790,-3.433)
N2: (16.469,-30.573,-4.900)
N3: (16.303,-28.456,-5.771)
N7: (16.391,-25.212,-4.250)
N9: (16.191,-26.095,-6.294)
O5': (16.569,-23.017,-8.381)
O3': (14.609,-26.527,-10.240)
OP2: (15.956,-21.185,-6.803)
C3': (14.926,-25.307,-9.617)
C1': (15.943,-26.184,-7.729)
C5': (16.790,-23.549,-9.682)
O6: (16.755,-27.133,-1.872)
O4': (16.994,-25.628,-8.488)
C8: (16.227,-24.962,-5.518)
C2: (16.456,-29.246,-4.723)
C6: (16.610,-27.445,-3.068)
C5: (16.450,-26.594,-4.182)
C4: (16.311,-27.149,-5.427)
P: (16.558,-21.451,-8.131)
C4': (16.433,-25.025,-9.686)
C2': (14.695,-25.418,-8.131)
O2': (13.550,-26.176,-7.817)
N1: (16.604,-28.790,-3.433)
N2: (16.469,-30.573,-4.900)
N3: (16.303,-28.456,-5.771)
N7: (16.391,-25.212,-4.250)
N9: (16.191,-26.095,-6.294)
O5': (16.569,-23.017,-8.381)
O3': (14.609,-26.527,-10.240)
Image (generated by PyMOL):