Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHY:A63:A59
Extra
PDB:
ATOM 1 O3' C A 62 34.302 -15.627 97.704 1.00145.54 O
ATOM 2 P G A 63 35.013 -16.226 99.012 1.00145.58 P
ATOM 3 OP1 G A 63 33.948 -16.464 100.014 1.00129.06 O
ATOM 4 OP2 G A 63 36.128 -15.312 99.360 1.00124.25 O
ATOM 5 O5' G A 63 35.589 -17.617 98.492 1.00147.92 O
ATOM 6 C5' G A 63 34.722 -18.619 97.979 1.00145.79 C
ATOM 7 C4' G A 63 35.497 -19.778 97.412 1.00141.99 C
ATOM 8 O4' G A 63 36.237 -19.344 96.244 1.00135.99 O
ATOM 9 C3' G A 63 36.557 -20.376 98.326 1.00151.03 C
ATOM 10 O3' G A 63 36.023 -21.302 99.259 1.00158.21 O
ATOM 11 C2' G A 63 37.535 -21.001 97.345 1.00148.00 C
ATOM 12 O2' G A 63 37.046 -22.251 96.885 1.00154.71 O
ATOM 13 C1' G A 63 37.482 -20.008 96.186 1.00142.32 C
ATOM 14 N9 G A 63 38.558 -19.000 96.265 1.00123.18 N
ATOM 15 C8 G A 63 38.439 -17.719 96.747 1.00121.34 C
ATOM 16 N7 G A 63 39.551 -17.042 96.686 1.00114.30 N
ATOM 17 C5 G A 63 40.456 -17.926 96.127 1.00107.91 C
ATOM 18 C6 G A 63 41.824 -17.741 95.815 1.00117.05 C
ATOM 19 O6 G A 63 42.517 -16.729 95.982 1.00119.80 O
ATOM 20 N1 G A 63 42.386 -18.887 95.252 1.00119.97 N
ATOM 21 C2 G A 63 41.714 -20.060 95.016 1.00121.49 C
ATOM 22 N2 G A 63 42.454 -21.037 94.460 1.00116.38 N
ATOM 23 N3 G A 63 40.427 -20.242 95.309 1.00115.93 N
ATOM 24 C4 G A 63 39.865 -19.140 95.855 1.00109.48 C
ATOM 25 P G A 64 36.957 -21.931 100.412 1.00171.74 P
ATOM 26 OP1 G A 64 36.112 -22.874 101.192 1.00170.43 O
ATOM 27 OP2 G A 64 37.599 -20.796 101.124 1.00173.56 O
ATOM 28 O5' G A 64 38.054 -22.742 99.583 1.00138.11 O
TER
ATOM 1 O3' C B 58 44.088 -5.115 96.664 1.00127.81 O
ATOM 2 P G B 59 44.631 -6.072 97.837 1.00150.08 P
ATOM 3 OP1 G B 59 44.373 -5.373 99.123 1.00145.19 O
ATOM 4 OP2 G B 59 46.035 -6.456 97.497 1.00114.37 O
ATOM 5 O5' G B 59 43.674 -7.332 97.703 1.00142.27 O
ATOM 6 C5' G B 59 42.264 -7.185 97.811 1.00137.95 C
ATOM 7 C4' G B 59 41.736 -7.925 99.005 1.00142.41 C
ATOM 8 O4' G B 59 41.823 -9.348 98.741 1.00134.55 O
ATOM 9 C3' G B 59 42.513 -7.687 100.299 1.00147.16 C
ATOM 10 O3' G B 59 41.639 -7.809 101.413 1.00145.40 O
ATOM 11 C2' G B 59 43.504 -8.839 100.312 1.00146.22 C
ATOM 12 O2' G B 59 43.985 -9.180 101.600 1.00140.92 O
ATOM 13 C1' G B 59 42.672 -9.964 99.693 1.00137.79 C
ATOM 14 N9 G B 59 43.466 -10.982 99.000 1.00122.11 N
ATOM 15 C8 G B 59 44.829 -10.996 98.798 1.00122.67 C
ATOM 16 N7 G B 59 45.245 -12.054 98.153 1.00117.29 N
ATOM 17 C5 G B 59 44.081 -12.778 97.916 1.00118.84 C
ATOM 18 C6 G B 59 43.891 -14.018 97.250 1.00116.10 C
ATOM 19 O6 G B 59 44.744 -14.745 96.723 1.00117.04 O
ATOM 20 N1 G B 59 42.543 -14.385 97.233 1.00118.12 N
ATOM 21 C2 G B 59 41.508 -13.663 97.787 1.00114.70 C
ATOM 22 N2 G B 59 40.279 -14.187 97.672 1.00106.35 N
ATOM 23 N3 G B 59 41.672 -12.508 98.410 1.00119.56 N
ATOM 24 C4 G B 59 42.974 -12.132 98.435 1.00122.44 C
ATOM 25 P U B 60 41.139 -6.499 102.183 1.00153.94 P
ATOM 26 OP1 U B 60 42.331 -5.658 102.437 1.00161.86 O
ATOM 27 OP2 U B 60 40.324 -6.958 103.336 1.00166.37 O
ATOM 28 O5' U B 60 40.205 -5.800 101.110 1.00154.85 O
TER
ATOM 2 P G A 63 35.013 -16.226 99.012 1.00145.58 P
ATOM 3 OP1 G A 63 33.948 -16.464 100.014 1.00129.06 O
ATOM 4 OP2 G A 63 36.128 -15.312 99.360 1.00124.25 O
ATOM 5 O5' G A 63 35.589 -17.617 98.492 1.00147.92 O
ATOM 6 C5' G A 63 34.722 -18.619 97.979 1.00145.79 C
ATOM 7 C4' G A 63 35.497 -19.778 97.412 1.00141.99 C
ATOM 8 O4' G A 63 36.237 -19.344 96.244 1.00135.99 O
ATOM 9 C3' G A 63 36.557 -20.376 98.326 1.00151.03 C
ATOM 10 O3' G A 63 36.023 -21.302 99.259 1.00158.21 O
ATOM 11 C2' G A 63 37.535 -21.001 97.345 1.00148.00 C
ATOM 12 O2' G A 63 37.046 -22.251 96.885 1.00154.71 O
ATOM 13 C1' G A 63 37.482 -20.008 96.186 1.00142.32 C
ATOM 14 N9 G A 63 38.558 -19.000 96.265 1.00123.18 N
ATOM 15 C8 G A 63 38.439 -17.719 96.747 1.00121.34 C
ATOM 16 N7 G A 63 39.551 -17.042 96.686 1.00114.30 N
ATOM 17 C5 G A 63 40.456 -17.926 96.127 1.00107.91 C
ATOM 18 C6 G A 63 41.824 -17.741 95.815 1.00117.05 C
ATOM 19 O6 G A 63 42.517 -16.729 95.982 1.00119.80 O
ATOM 20 N1 G A 63 42.386 -18.887 95.252 1.00119.97 N
ATOM 21 C2 G A 63 41.714 -20.060 95.016 1.00121.49 C
ATOM 22 N2 G A 63 42.454 -21.037 94.460 1.00116.38 N
ATOM 23 N3 G A 63 40.427 -20.242 95.309 1.00115.93 N
ATOM 24 C4 G A 63 39.865 -19.140 95.855 1.00109.48 C
ATOM 25 P G A 64 36.957 -21.931 100.412 1.00171.74 P
ATOM 26 OP1 G A 64 36.112 -22.874 101.192 1.00170.43 O
ATOM 27 OP2 G A 64 37.599 -20.796 101.124 1.00173.56 O
ATOM 28 O5' G A 64 38.054 -22.742 99.583 1.00138.11 O
TER
ATOM 1 O3' C B 58 44.088 -5.115 96.664 1.00127.81 O
ATOM 2 P G B 59 44.631 -6.072 97.837 1.00150.08 P
ATOM 3 OP1 G B 59 44.373 -5.373 99.123 1.00145.19 O
ATOM 4 OP2 G B 59 46.035 -6.456 97.497 1.00114.37 O
ATOM 5 O5' G B 59 43.674 -7.332 97.703 1.00142.27 O
ATOM 6 C5' G B 59 42.264 -7.185 97.811 1.00137.95 C
ATOM 7 C4' G B 59 41.736 -7.925 99.005 1.00142.41 C
ATOM 8 O4' G B 59 41.823 -9.348 98.741 1.00134.55 O
ATOM 9 C3' G B 59 42.513 -7.687 100.299 1.00147.16 C
ATOM 10 O3' G B 59 41.639 -7.809 101.413 1.00145.40 O
ATOM 11 C2' G B 59 43.504 -8.839 100.312 1.00146.22 C
ATOM 12 O2' G B 59 43.985 -9.180 101.600 1.00140.92 O
ATOM 13 C1' G B 59 42.672 -9.964 99.693 1.00137.79 C
ATOM 14 N9 G B 59 43.466 -10.982 99.000 1.00122.11 N
ATOM 15 C8 G B 59 44.829 -10.996 98.798 1.00122.67 C
ATOM 16 N7 G B 59 45.245 -12.054 98.153 1.00117.29 N
ATOM 17 C5 G B 59 44.081 -12.778 97.916 1.00118.84 C
ATOM 18 C6 G B 59 43.891 -14.018 97.250 1.00116.10 C
ATOM 19 O6 G B 59 44.744 -14.745 96.723 1.00117.04 O
ATOM 20 N1 G B 59 42.543 -14.385 97.233 1.00118.12 N
ATOM 21 C2 G B 59 41.508 -13.663 97.787 1.00114.70 C
ATOM 22 N2 G B 59 40.279 -14.187 97.672 1.00106.35 N
ATOM 23 N3 G B 59 41.672 -12.508 98.410 1.00119.56 N
ATOM 24 C4 G B 59 42.974 -12.132 98.435 1.00122.44 C
ATOM 25 P U B 60 41.139 -6.499 102.183 1.00153.94 P
ATOM 26 OP1 U B 60 42.331 -5.658 102.437 1.00161.86 O
ATOM 27 OP2 U B 60 40.324 -6.958 103.336 1.00166.37 O
ATOM 28 O5' U B 60 40.205 -5.800 101.110 1.00154.85 O
TER
Atoms:
OP1: (33.948,-16.464,100.014)
OP2: (36.128,-15.312,99.360)
C3': (36.557,-20.376,98.326)
C1': (37.482,-20.008,96.186)
C5': (34.722,-18.619,97.979)
O6: (42.517,-16.729,95.982)
O4': (36.237,-19.344,96.244)
C8: (38.439,-17.719,96.747)
C2: (41.714,-20.060,95.016)
C6: (41.824,-17.741,95.815)
C5: (40.456,-17.926,96.127)
C4: (39.865,-19.140,95.855)
P: (35.013,-16.226,99.012)
C4': (35.497,-19.778,97.412)
C2': (37.535,-21.001,97.345)
O2': (37.046,-22.251,96.885)
N1: (42.386,-18.887,95.252)
N2: (42.454,-21.037,94.460)
N3: (40.427,-20.242,95.309)
N7: (39.551,-17.042,96.686)
N9: (38.558,-19.000,96.265)
O5': (35.589,-17.617,98.492)
O3': (36.023,-21.302,99.259)
OP2: (36.128,-15.312,99.360)
C3': (36.557,-20.376,98.326)
C1': (37.482,-20.008,96.186)
C5': (34.722,-18.619,97.979)
O6: (42.517,-16.729,95.982)
O4': (36.237,-19.344,96.244)
C8: (38.439,-17.719,96.747)
C2: (41.714,-20.060,95.016)
C6: (41.824,-17.741,95.815)
C5: (40.456,-17.926,96.127)
C4: (39.865,-19.140,95.855)
P: (35.013,-16.226,99.012)
C4': (35.497,-19.778,97.412)
C2': (37.535,-21.001,97.345)
O2': (37.046,-22.251,96.885)
N1: (42.386,-18.887,95.252)
N2: (42.454,-21.037,94.460)
N3: (40.427,-20.242,95.309)
N7: (39.551,-17.042,96.686)
N9: (38.558,-19.000,96.265)
O5': (35.589,-17.617,98.492)
O3': (36.023,-21.302,99.259)
OP1: (44.373,-5.373,99.123)
OP2: (46.035,-6.456,97.497)
C3': (42.513,-7.687,100.299)
C1': (42.672,-9.964,99.693)
C5': (42.264,-7.185,97.811)
O6: (44.744,-14.745,96.723)
O4': (41.823,-9.348,98.741)
C8: (44.829,-10.996,98.798)
C2: (41.508,-13.663,97.787)
C6: (43.891,-14.018,97.250)
C5: (44.081,-12.778,97.916)
C4: (42.974,-12.132,98.435)
P: (44.631,-6.072,97.837)
C4': (41.736,-7.925,99.005)
C2': (43.504,-8.839,100.312)
O2': (43.985,-9.180,101.600)
N1: (42.543,-14.385,97.233)
N2: (40.279,-14.187,97.672)
N3: (41.672,-12.508,98.410)
N7: (45.245,-12.054,98.153)
N9: (43.466,-10.982,99.000)
O5': (43.674,-7.332,97.703)
O3': (41.639,-7.809,101.413)
OP2: (46.035,-6.456,97.497)
C3': (42.513,-7.687,100.299)
C1': (42.672,-9.964,99.693)
C5': (42.264,-7.185,97.811)
O6: (44.744,-14.745,96.723)
O4': (41.823,-9.348,98.741)
C8: (44.829,-10.996,98.798)
C2: (41.508,-13.663,97.787)
C6: (43.891,-14.018,97.250)
C5: (44.081,-12.778,97.916)
C4: (42.974,-12.132,98.435)
P: (44.631,-6.072,97.837)
C4': (41.736,-7.925,99.005)
C2': (43.504,-8.839,100.312)
O2': (43.985,-9.180,101.600)
N1: (42.543,-14.385,97.233)
N2: (40.279,-14.187,97.672)
N3: (41.672,-12.508,98.410)
N7: (45.245,-12.054,98.153)
N9: (43.466,-10.982,99.000)
O5': (43.674,-7.332,97.703)
O3': (41.639,-7.809,101.413)
Image (generated by PyMOL):