Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R1D:A5:B5
Extra
PDB:
ATOM 1 O3' C A 4 34.021 12.958 9.118 1.00 21.78 O
ATOM 2 P G A 5 35.346 12.097 9.212 1.00 23.12 P
ATOM 3 OP1 G A 5 36.414 12.878 8.524 1.00 27.60 O
ATOM 4 OP2 G A 5 35.116 10.712 8.784 1.00 24.30 O
ATOM 5 O5' G A 5 35.588 12.133 10.787 1.00 22.04 O
ATOM 6 C5' G A 5 36.310 11.083 11.389 1.00 22.17 C
ATOM 7 C4' G A 5 36.238 11.281 12.892 1.00 19.87 C
ATOM 8 O4' G A 5 34.856 11.191 13.310 1.00 20.47 O
ATOM 9 C3' G A 5 36.939 10.179 13.660 1.00 15.04 C
ATOM 10 O3' G A 5 38.318 10.463 13.765 1.00 15.80 O
ATOM 11 C2' G A 5 36.225 10.303 14.996 1.00 16.73 C
ATOM 12 O2' G A 5 36.629 11.465 15.688 1.00 17.03 O
ATOM 13 C1' G A 5 34.789 10.476 14.533 1.00 17.34 C
ATOM 14 N9 G A 5 34.193 9.161 14.328 1.00 13.42 N
ATOM 15 C8 G A 5 33.957 8.293 15.372 1.00 14.60 C
ATOM 16 N7 G A 5 33.428 7.164 14.986 1.00 14.69 N
ATOM 17 C5 G A 5 33.309 7.291 13.612 1.00 14.68 C
ATOM 18 C6 G A 5 32.805 6.372 12.676 1.00 17.12 C
ATOM 19 O6 G A 5 32.354 5.243 12.889 1.00 15.81 O
ATOM 20 N1 G A 5 32.855 6.878 11.374 1.00 17.41 N
ATOM 21 C2 G A 5 33.339 8.113 11.041 1.00 18.71 C
ATOM 22 N2 G A 5 33.308 8.423 9.729 1.00 17.61 N
ATOM 23 N3 G A 5 33.820 8.983 11.908 1.00 16.09 N
ATOM 24 C4 G A 5 33.778 8.511 13.183 1.00 13.87 C
ATOM 25 P G A 6 39.404 9.306 13.738 1.00 17.45 P
ATOM 26 OP1 G A 6 40.730 9.951 13.860 1.00 20.35 O
ATOM 27 OP2 G A 6 39.121 8.435 12.570 1.00 20.16 O
ATOM 28 O5' G A 6 39.092 8.464 15.040 1.00 16.53 O
TER
ATOM 1 O3' C B 4 31.691 -5.162 18.573 1.00 15.72 O
ATOM 2 P G B 5 30.344 -4.396 18.867 1.00 16.97 P
ATOM 3 OP1 G B 5 29.680 -5.049 19.992 1.00 18.02 O
ATOM 4 OP2 G B 5 29.622 -4.224 17.580 1.00 20.27 O
ATOM 5 O5' G B 5 30.774 -2.919 19.326 1.00 15.96 O
ATOM 6 C5' G B 5 31.543 -2.736 20.519 1.00 15.57 C
ATOM 7 C4' G B 5 32.072 -1.312 20.566 1.00 17.50 C
ATOM 8 O4' G B 5 32.885 -1.034 19.411 1.00 16.03 O
ATOM 9 C3' G B 5 31.009 -0.227 20.537 1.00 16.91 C
ATOM 10 O3' G B 5 30.384 -0.163 21.797 1.00 17.09 O
ATOM 11 C2' G B 5 31.872 0.979 20.182 1.00 15.37 C
ATOM 12 O2' G B 5 32.629 1.475 21.275 1.00 19.82 O
ATOM 13 C1' G B 5 32.784 0.358 19.121 1.00 17.42 C
ATOM 14 N9 G B 5 32.331 0.500 17.730 1.00 15.80 N
ATOM 15 C8 G B 5 31.755 -0.425 16.896 1.00 17.67 C
ATOM 16 N7 G B 5 31.493 0.035 15.697 1.00 18.65 N
ATOM 17 C5 G B 5 31.922 1.363 15.730 1.00 15.79 C
ATOM 18 C6 G B 5 31.900 2.369 14.728 1.00 18.66 C
ATOM 19 O6 G B 5 31.484 2.306 13.558 1.00 17.65 O
ATOM 20 N1 G B 5 32.443 3.560 15.198 1.00 15.91 N
ATOM 21 C2 G B 5 32.929 3.742 16.465 1.00 13.81 C
ATOM 22 N2 G B 5 33.407 4.972 16.735 1.00 13.95 N
ATOM 23 N3 G B 5 32.970 2.801 17.411 1.00 14.94 N
ATOM 24 C4 G B 5 32.441 1.647 16.973 1.00 15.80 C
ATOM 25 P G B 6 29.066 0.676 22.041 1.00 17.79 P
ATOM 26 OP1 G B 6 28.709 0.574 23.462 1.00 19.82 O
ATOM 27 OP2 G B 6 28.068 0.345 20.995 1.00 18.80 O
ATOM 28 O5' G B 6 29.618 2.153 21.728 1.00 15.53 O
TER
ATOM 2 P G A 5 35.346 12.097 9.212 1.00 23.12 P
ATOM 3 OP1 G A 5 36.414 12.878 8.524 1.00 27.60 O
ATOM 4 OP2 G A 5 35.116 10.712 8.784 1.00 24.30 O
ATOM 5 O5' G A 5 35.588 12.133 10.787 1.00 22.04 O
ATOM 6 C5' G A 5 36.310 11.083 11.389 1.00 22.17 C
ATOM 7 C4' G A 5 36.238 11.281 12.892 1.00 19.87 C
ATOM 8 O4' G A 5 34.856 11.191 13.310 1.00 20.47 O
ATOM 9 C3' G A 5 36.939 10.179 13.660 1.00 15.04 C
ATOM 10 O3' G A 5 38.318 10.463 13.765 1.00 15.80 O
ATOM 11 C2' G A 5 36.225 10.303 14.996 1.00 16.73 C
ATOM 12 O2' G A 5 36.629 11.465 15.688 1.00 17.03 O
ATOM 13 C1' G A 5 34.789 10.476 14.533 1.00 17.34 C
ATOM 14 N9 G A 5 34.193 9.161 14.328 1.00 13.42 N
ATOM 15 C8 G A 5 33.957 8.293 15.372 1.00 14.60 C
ATOM 16 N7 G A 5 33.428 7.164 14.986 1.00 14.69 N
ATOM 17 C5 G A 5 33.309 7.291 13.612 1.00 14.68 C
ATOM 18 C6 G A 5 32.805 6.372 12.676 1.00 17.12 C
ATOM 19 O6 G A 5 32.354 5.243 12.889 1.00 15.81 O
ATOM 20 N1 G A 5 32.855 6.878 11.374 1.00 17.41 N
ATOM 21 C2 G A 5 33.339 8.113 11.041 1.00 18.71 C
ATOM 22 N2 G A 5 33.308 8.423 9.729 1.00 17.61 N
ATOM 23 N3 G A 5 33.820 8.983 11.908 1.00 16.09 N
ATOM 24 C4 G A 5 33.778 8.511 13.183 1.00 13.87 C
ATOM 25 P G A 6 39.404 9.306 13.738 1.00 17.45 P
ATOM 26 OP1 G A 6 40.730 9.951 13.860 1.00 20.35 O
ATOM 27 OP2 G A 6 39.121 8.435 12.570 1.00 20.16 O
ATOM 28 O5' G A 6 39.092 8.464 15.040 1.00 16.53 O
TER
ATOM 1 O3' C B 4 31.691 -5.162 18.573 1.00 15.72 O
ATOM 2 P G B 5 30.344 -4.396 18.867 1.00 16.97 P
ATOM 3 OP1 G B 5 29.680 -5.049 19.992 1.00 18.02 O
ATOM 4 OP2 G B 5 29.622 -4.224 17.580 1.00 20.27 O
ATOM 5 O5' G B 5 30.774 -2.919 19.326 1.00 15.96 O
ATOM 6 C5' G B 5 31.543 -2.736 20.519 1.00 15.57 C
ATOM 7 C4' G B 5 32.072 -1.312 20.566 1.00 17.50 C
ATOM 8 O4' G B 5 32.885 -1.034 19.411 1.00 16.03 O
ATOM 9 C3' G B 5 31.009 -0.227 20.537 1.00 16.91 C
ATOM 10 O3' G B 5 30.384 -0.163 21.797 1.00 17.09 O
ATOM 11 C2' G B 5 31.872 0.979 20.182 1.00 15.37 C
ATOM 12 O2' G B 5 32.629 1.475 21.275 1.00 19.82 O
ATOM 13 C1' G B 5 32.784 0.358 19.121 1.00 17.42 C
ATOM 14 N9 G B 5 32.331 0.500 17.730 1.00 15.80 N
ATOM 15 C8 G B 5 31.755 -0.425 16.896 1.00 17.67 C
ATOM 16 N7 G B 5 31.493 0.035 15.697 1.00 18.65 N
ATOM 17 C5 G B 5 31.922 1.363 15.730 1.00 15.79 C
ATOM 18 C6 G B 5 31.900 2.369 14.728 1.00 18.66 C
ATOM 19 O6 G B 5 31.484 2.306 13.558 1.00 17.65 O
ATOM 20 N1 G B 5 32.443 3.560 15.198 1.00 15.91 N
ATOM 21 C2 G B 5 32.929 3.742 16.465 1.00 13.81 C
ATOM 22 N2 G B 5 33.407 4.972 16.735 1.00 13.95 N
ATOM 23 N3 G B 5 32.970 2.801 17.411 1.00 14.94 N
ATOM 24 C4 G B 5 32.441 1.647 16.973 1.00 15.80 C
ATOM 25 P G B 6 29.066 0.676 22.041 1.00 17.79 P
ATOM 26 OP1 G B 6 28.709 0.574 23.462 1.00 19.82 O
ATOM 27 OP2 G B 6 28.068 0.345 20.995 1.00 18.80 O
ATOM 28 O5' G B 6 29.618 2.153 21.728 1.00 15.53 O
TER
Atoms:
OP1: (36.414,12.878,8.524)
OP2: (35.116,10.712,8.784)
C3': (36.939,10.179,13.660)
C1': (34.789,10.476,14.533)
C5': (36.310,11.083,11.389)
O6: (32.354,5.243,12.889)
O4': (34.856,11.191,13.310)
C8: (33.957,8.293,15.372)
C2: (33.339,8.113,11.041)
C6: (32.805,6.372,12.676)
C5: (33.309,7.291,13.612)
C4: (33.778,8.511,13.183)
P: (35.346,12.097,9.212)
C4': (36.238,11.281,12.892)
C2': (36.225,10.303,14.996)
O2': (36.629,11.465,15.688)
N1: (32.855,6.878,11.374)
N2: (33.308,8.423,9.729)
N3: (33.820,8.983,11.908)
N7: (33.428,7.164,14.986)
N9: (34.193,9.161,14.328)
O5': (35.588,12.133,10.787)
O3': (38.318,10.463,13.765)
OP2: (35.116,10.712,8.784)
C3': (36.939,10.179,13.660)
C1': (34.789,10.476,14.533)
C5': (36.310,11.083,11.389)
O6: (32.354,5.243,12.889)
O4': (34.856,11.191,13.310)
C8: (33.957,8.293,15.372)
C2: (33.339,8.113,11.041)
C6: (32.805,6.372,12.676)
C5: (33.309,7.291,13.612)
C4: (33.778,8.511,13.183)
P: (35.346,12.097,9.212)
C4': (36.238,11.281,12.892)
C2': (36.225,10.303,14.996)
O2': (36.629,11.465,15.688)
N1: (32.855,6.878,11.374)
N2: (33.308,8.423,9.729)
N3: (33.820,8.983,11.908)
N7: (33.428,7.164,14.986)
N9: (34.193,9.161,14.328)
O5': (35.588,12.133,10.787)
O3': (38.318,10.463,13.765)
OP1: (29.680,-5.049,19.992)
OP2: (29.622,-4.224,17.580)
C3': (31.009,-0.227,20.537)
C1': (32.784,0.358,19.121)
C5': (31.543,-2.736,20.519)
O6: (31.484,2.306,13.558)
O4': (32.885,-1.034,19.411)
C8: (31.755,-0.425,16.896)
C2: (32.929,3.742,16.465)
C6: (31.900,2.369,14.728)
C5: (31.922,1.363,15.730)
C4: (32.441,1.647,16.973)
P: (30.344,-4.396,18.867)
C4': (32.072,-1.312,20.566)
C2': (31.872,0.979,20.182)
O2': (32.629,1.475,21.275)
N1: (32.443,3.560,15.198)
N2: (33.407,4.972,16.735)
N3: (32.970,2.801,17.411)
N7: (31.493,0.035,15.697)
N9: (32.331,0.500,17.730)
O5': (30.774,-2.919,19.326)
O3': (30.384,-0.163,21.797)
OP2: (29.622,-4.224,17.580)
C3': (31.009,-0.227,20.537)
C1': (32.784,0.358,19.121)
C5': (31.543,-2.736,20.519)
O6: (31.484,2.306,13.558)
O4': (32.885,-1.034,19.411)
C8: (31.755,-0.425,16.896)
C2: (32.929,3.742,16.465)
C6: (31.900,2.369,14.728)
C5: (31.922,1.363,15.730)
C4: (32.441,1.647,16.973)
P: (30.344,-4.396,18.867)
C4': (32.072,-1.312,20.566)
C2': (31.872,0.979,20.182)
O2': (32.629,1.475,21.275)
N1: (32.443,3.560,15.198)
N2: (33.407,4.972,16.735)
N3: (32.970,2.801,17.411)
N7: (31.493,0.035,15.697)
N9: (32.331,0.500,17.730)
O5': (30.774,-2.919,19.326)
O3': (30.384,-0.163,21.797)
Image (generated by PyMOL):